Caretta caretta (Loggerhead turtle): 125641575
Help
Entry
125641575 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125641575
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125641575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125641575
NCBI-ProteinID:
XP_048717709
LinkDB
All DBs
Position
8:37908976..37911067
Genome browser
AA seq
586 aa
AA seq
DB search
MSVCSFLLRMADKKRRTTIKRQVASLILFLCVWALECETVRYSVPEEMESGSFVANVAKD
LGLDPKRLSARRARVVSEGSRQHFQLNSNTGDLFIKEKVDREELCGEAEPCMVQFEIILQ
NPLQAYPAEIRVYDINDHSPVFSDKEFILKILETSDPGSRFPLENAQDLDVGNNSLRNYS
ISDNNDYFHIYTRVRSDGRKFAELVLDKPLDREEQPEVSLVLTAVDGGSPPRSGTAQIRV
IVLDANDNPPVFSQTTYKARVLENSSKDYLVVTVSATDLDEGNYGEISYFFSQKSKENSK
TFHINPVTGELRLTGQLDFETIETYELDVQATDGGGLFSHSKVLVEVLDVNDNPPEVKVM
SLTSPIPEDSSPVTVVALFSVRDRDSGDNGRTVCSIEDDLPFSLKTTFKNSYSLVTEYVL
DREKVSEYNITITARDLGTPRLSTEERIVVKISDINDNSPEFSQTSYTMYVRENNGPAVL
IGKVSAFDSDSEQNAKVTYSLLPAEVGGLPLLSYISINSENGNVYALRSMDYEQIKEFQV
TVRAADGGSPPLSSEVIIRVVITXMKMTTRPSFYTLCRTAAPQLMT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttctttcctattaagaatggcggataagaagaggagaacaacaatcaaa
aggcaagtcgcttctctcattctatttctttgcgtgtgggccctcgaatgcgagacggtt
cgctattctgtgcctgaggaaatggaaagcgggtcctttgtggctaatgtagcaaaggat
ctagggctagacccgaagagactgtctgctcgcagggcccgtgtggtttccgaaggcagc
cgccagcatttccagctaaacagcaacaccggggacttgtttattaaagagaaagtggac
agagaggaattatgcggggaagcggagccctgcatggtgcaatttgaaataatcctgcaa
aatcccttacaagcctatcccgctgagataagagtttatgatataaacgatcattctcca
gtattctcagacaaggaatttattttaaaaatcctggaaacgtctgaccctgggtctcga
tttcccttggaaaatgcccaggatttagatgtgggaaacaacagcctccggaactacagc
attagcgataataatgactacttccatatttatacgcgggttcggagtgacggcaggaaa
ttcgcagagctggtgctggataaaccactggaccgcgaggagcagccggaggtgagtcta
gtgctcacggccgtggatggcggctcccccccgaggtcaggcacagcacaaatccgtgtc
attgtcctcgatgccaacgacaatccccctgtgttctctcaaaccacttacaaagctcga
gttctggaaaacagctccaaagattatctggttgtcactgtttctgctactgatttagac
gagggaaattatggggaaatatcctatttttttagccagaaatccaaagaaaacagtaaa
acctttcatataaacccagtgacaggggaacttcgactcacaggccaattggattttgaa
acgattgaaacatatgagctagatgttcaggccacagatggcggggggctgttttcccac
tccaaagtgcttgtggaggtgctggatgtgaatgacaatcccccggaagttaaagtaatg
tccctcaccagccccatacctgaggactcctcgcctgtaacagtggtggcgctgttcagc
gtcagagaccgggactctggggacaacgggagaacagtctgctccatagaagatgatctt
ccattttctttgaaaacaactttcaaaaattcctactctctagtgactgaatatgtgctt
gaccgagagaaagtatcggagtataacatcaccatcacagccagagatttgggaactccc
agactctccactgaggagagaatcgtcgtgaaaatatcagacattaatgacaattcccca
gagttcagtcaaacatcatacactatgtatgtccgagaaaacaacggcccagccgtcttg
atagggaaggtcagtgcttttgattcggactcagagcagaatgccaaagtgacatactct
ctattgcctgccgaggtaggtggccttccgcttctctcctatatctccataaactcggaa
aatgggaatgtgtacgctctgcgatccatggattatgaacagataaaagagttccaggtc
actgtgagagctgcagatggcgggtcccctccactgagctctgaagtcattatccgagtt
gtgataactnngatgaaaatgacaacgcgcccttcattttataccctctgcagaacagca
gcgccccagctaatgacctag
DBGET
integrated database retrieval system
