Caretta caretta (Loggerhead turtle): 125641588
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Entry
125641588 CDS
T09292
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04080
Neuroactive ligand-receptor interaction
ccay04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125641588 (GABRA1)
04082 Neuroactive ligand signaling
125641588 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125641588 (GABRA1)
Ion channels [BR:
ccay04040
]
Ligand-gated channels
GABA-A
125641588 (GABRA1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125641588
NCBI-ProteinID:
XP_048717731
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Position
8:24625977..24681801
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AA seq
455 aa
AA seq
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MKSILALCDCLWAWTLLLNTLSGRSYGQTSLQDEIKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWRDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKLKDP
LIKKNNTYTAAATSYTPNIARDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcattctagcactttgtgactgtctttgggcctggaccctgcttttgaataca
ctgtctggaagaagctatggacaaacttcattacaagatgaaattaaagacaatactaca
gtgtttaccagaatactggatcgtctgctggatggttatgataaccgcctaagaccagga
ttgggagagcgtgtaactgaagtgaagactgatatcttcgtcaccagctttgggcctgtt
tccgaccacgatatggaatatacaatagatgtatttttccgtcaaagttggagagatgag
agactaaaattcaaaggacccatgacagtcctccggctaaataatttaatggccagcaag
atttggacacctgatacttttttccacaatggaaagaaatcagtggctcacaacatgacg
atgccgaacaaactgctacgaattacagaggatgggacactgctgtatacaatgagactg
actgtgagagcagaatgtccaatgcatttagaagactttccaatggatgcacatgcttgc
ccattgaaatttggaagctatgcctataccagagcagaggttgtgtatgaatggacaagg
gaaccagcgaggtctgtggttgtggctgaagatggctctcgattgaaccaatatgatctt
ctggggcaaactgtggactctggaattgttcagtccagtacaggggagtatgttgttatg
actacccacttccatttgaagagaaagattggttactttgtcattcagacatatctacca
tgcatcatgacagtgattctgtcccaggtgtccttctggcttaacagagaatctgttcca
gcaagaactgtatttggagtgacaactgtcctcacaatgaccaccttgagcatcagtgca
agaaattcccttccaaaggtggcctatgccactgctatggattggtttatagcagtgtgc
tatgcatttgtgttttcagcactcatcgaatttgcgacagtaaactacttcacaaagaga
ggttacgcatgggatggcaaaagtgtggttcctgaaaagccaaagaaactgaaggatcct
ctcattaagaaaaataacacatacacagcagcagcaacaagctacacccctaatattgcc
agagaccctgggctggctaccattgctaaaagtgcaacaatagaacccaaagaagttaaa
ccagaaacaaaaccaccagaacccaagaaaacttttaacagtgtcagcaaaattgatcga
ctatcaagaatagctttcccactgctttttggaatctttaatttagtctactgggcaact
tatttaaacagagagccccagctgaaagccccaactccacatcaataa
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