Caretta caretta (Loggerhead turtle): 125641691
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Entry
125641691 CDS
T09292
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125641691
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125641691
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
125641691
NCBI-ProteinID:
XP_048717964
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Position
8:37381870..37391421
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AA seq
991 aa
AA seq
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MARVVSGESYPWRRCRSRGPGAMGAGVWGSGWTWSRQMLLLLVTSCLEPAAGQLRYSVPE
ELEHGAFVANIAEDLGLDVSKLSTRRFRIVSRAGTKQHLEVNLENGILFVNEKIDREEVC
EAGGACLLHLQLVIESPLALYRVEVEVLDINDNAPSFPWPEYVLEVTESALPGARFPLES
AQDPDVGTNSLRTYQLSSNGFFSLEVQTRSDGSKFAELVLERALDREKQRSHRLLLTALD
GGLPERSGTAGILVTVLDANDNVPAFDQPSYGVSLPEDAPPGTLVIKLNATDLDEGTNGE
IEYSFSGHAPPRVRQLFSVEPRSGQVRLAGPLDYERARLHELYVQAKDRGPSAVAVHCRV
LVHLLDVNDNAPEVSLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNGQVSCEIPRNVPFQ
LQAAFRNYYTLVTTAALDREAVPEYNLSITARDMGSPALLTRKTLTVQVSDINDNAPRFL
QPSYNVYVLENNAPGASICSVSAVDPDCRQNAYLSYSIAEGHIQGMPVATYVSINSDSGH
MYALRSLDYEQIRNFQVQVQAQDAGFPPLSSNVTVNVFILDQNDNAPVIVSPVPRNGSLA
TEVVPRSADPGYVVGKVSAVDADSGQNSRLSYQILQATDPSLFSVALYTGELRTIRAFLD
KDATRQRLVIQVRDNGQPPLSASISLLLSVVESMPETLSDFNELSLNPELSSSTLTLYLI
VSLGSVSFTFLVAIIILTAIKCHKDRHSLHGYGCSLPACCCVRARASAKVFKNSNIKPQL
SSGNKVPTNCLDVAGSGPPGYCYKVCLTPESTKSDFMFLKPYSPSPPRNNEKAAEDLPGP
GRKAREANNTVSAASQIKQPNVDQLPTKTQRSALKSSQSLEDVGGVRRGVQKEHDRLRTL
VTPVSEFQKAPGASNSIWTPRYGPLYPPQIPPLDYQHNVYIPGTPTMLANKEGPHCLDPE
GKNSFSTFGKRKKMTTYCDIGDSMIVNNDLK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggtggtctcgggtgagtcttatccctggaggcgctgccggagcaggggcccc
ggcgctatgggggctggagtctggggcagcggctggacttggagccggcagatgctgctg
ctcctggtgacttcttgcctggagccggcggccggccagctgcgctactcggtacccgag
gagctggagcacggcgccttcgtggctaacatcgccgaggacctgggtctggacgtgtcc
aagctgtcgacgcggcggttccgcatcgtgtcccgggccggcaccaagcagcatctggag
gtgaacttggagaacgggatcctcttcgtcaacgagaagatcgaccgcgaggaggtgtgc
gaggccggcggggcctgcctgctgcacctgcagctggtgatcgagagcccgctggcgctg
taccgcgtggaggtggaggtgctggacatcaacgacaacgcgcccagcttcccctggccg
gagtacgtgctggaggtgaccgagtcggcgctgcccggcgcacgcttcccgctggagagc
gcgcaggacccggacgtgggcaccaactccctgcgcacctaccagctcagctccaacggc
ttcttctcgctcgaggtgcagacccgcagcgacggcagcaagttcgccgagctggtgctg
gagcgagccctggatcgcgagaagcagcgcagccaccgcctgctgctcaccgccctggac
ggcggcctcccggagaggtcgggcaccgccggaatcctcgtcaccgtgctggacgccaac
gacaacgtgccggccttcgaccagccctcctacggggtgagcctgcccgaggacgcgccg
ccaggcacgctggtcatcaagctcaacgccacggacctggacgagggcacgaacggcgag
atcgagtactccttcagcggccacgcgccgccccgggtgcgccagctcttcagcgtggag
ccgcgcagcggccaggtgcgcctggccggcccgctggactacgagcgggcgcgcctgcac
gagctctacgtgcaggccaaggaccgcggcccctcggcggtggccgtgcactgccgggtg
ctggtgcacctgctcgatgtcaacgataacgcgccggaggtgagcctcacctcggtttcc
acgccggtgctggaggacgcgccgccgggcaccgtgatcgccgtgatcagcgtgctggac
cgggactccggggacaacgggcaggtgagctgcgagatcccccgcaacgtgcccttccag
ctccaggccgccttccgcaactactacacgctggtcaccaccgcggcgctggaccgcgag
gccgtgcccgagtacaacctcagcatcacggcgcgggacatgggctcgccagcgctgctc
accaggaagaccctgaccgtccaggtgtcggacatcaacgacaacgcgccccgcttcctg
cagccctcctacaacgtctatgtgctggagaacaacgccccgggcgcctccatctgctct
gtcagcgctgtggaccccgactgccggcagaacgcctatctgtcctactccatcgccgag
gggcacatccagggcatgcccgtggccacctatgtctccatcaactcggatagcgggcac
atgtacgcgctgcgctctctggactacgagcagatccgcaacttccaggtgcaggtgcag
gcgcaggacgcgggcttccccccgctcagcagcaatgtcaccgtcaacgtcttcatcctg
gaccagaatgacaacgcgccggtcatcgtctcgcccgtgccccgcaacggctcgcttgcc
acagaggtggtgccccgctcagccgaccccggctacgtggtgggaaaggtgtcggccgta
gacgcggactctgggcagaattccaggctctcctaccagatcctgcaggccactgacccc
agcctcttcagcgtggccctgtacacgggcgagctccgcaccatccgagccttcctggac
aaagatgccacgaggcagcgcttggtcatccaggtgcgggacaacgggcagccgccgctc
tccgcctctatatccctgctgctgtccgtggtggagagcatgcccgagaccctgtccgat
ttcaacgagctctccctgaaccccgaactctcctcctccacgctcaccctctacctcatc
gtctcactgggctccgtgtctttcacctttctggtggccatcatcatcctcacggccatc
aagtgccacaaggaccggcactccctgcatggctatggctgctccctccccgcctgctgc
tgcgtgagggccagggcctctgccaaggtcttcaaaaattccaacatcaagccccagctc
tcctcgggcaacaaagtgcccaccaactgcctggacgtggcaggcagcggccctccaggc
tactgctacaaagtctgcctgaccccggagtccaccaagagcgacttcatgtttctaaag
ccctacagcccgagtcccccgaggaacaacgagaaagccgccgaggacttaccagggccg
ggcaggaaggcccgagaggccaataacaccgtcagtgccgccagccagatcaaacagccc
aatgtggaccagctgcctacaaaaacccagcgatcagccctgaaaagttcgcagagtctg
gaggacgtagggggagtccgcagaggagtccagaaagagcacgacaggctgcgtaccctg
gtcactccagtctctgaattccagaaggcacccggggcctccaacagcatttggaccccc
aggtacggccccctgtacccgccgcaaatcccacctctggattaccagcacaacgtttat
ataccagggaccccaaccatgctggcaaacaaggaggggccccactgcctggatccggag
ggcaagaacagcttctccacttttgggaagaggaagaaaatgaccacctattgcgacata
ggcgatagcatgattgtcaacaatgacttaaaataa
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