Caretta caretta (Loggerhead turtle): 125641853 Help Entry 125641853         CDS       T09292                                  Symbol COL24A1 Name (RefSeq) collagen alpha-1(XXIV) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ccay00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     125641853 (COL24A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccay00536]     125641853 (COL24A1) Glycosaminoglycan binding proteins [BR:ccay00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125641853 (COL24A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  125641853 NCBI-ProteinID:  XP_048718324 LinkDB All DBs Position 8:77982906..78230092 Genome browser AA seq 1733 aa AA seqDB search MHLGAKRTRSGSISPTAKTKTLLLFLAICVAVGAAQMPAQGIDVLHQLGLGGKDIQHPSA VSTMPLSSVPLPQGVRLTASGVVLTRDAHIESPITQVIPSSLGNQFTLLIGLHSYRVNNA FLFSIRDKNRLQFGVQLLPKKVVVYIGGKQSVYFDYSIHDEQWHSFAIDIRDKTVSMFAE CGKKYYSRETLSKVQIFDLDGLFTLGRMNSQSVSFEGVICQLDIIPSAQASANYCKYVKQ QCRQAETYRSLPAPPDTSAGVSVNFPRKQFGDNTQSEHKSFYTQKEALNLPINNTAPIHT LPESLALRTVTPSELAKSEPQSTTIRPEASVQENFSLSIHQQDLSKKRNGSKKKLGSPQN SSDNATEDAGGKSELPLISFVKQSKIKDMKTQVKAKQLLDEPLEIQQILNTTLYRATVDL SLDNQLNPWEEGAFDADETYAAENGYEIDVESYNYDYEDLNKVFEMENSRGPKGETGPPG PPGPPGLPGLSGKRGPTALIVLTNIRIPPSVGCYFFTLKSRSRALLLCAKPEADGVPGPH GNPGLPGVPGQKGPKGDAAFSPGQAKRGEKGDPGPRGLLGPPGIKGQKGHKGYPGPPGPQ GEQGIPGMAGNAGSLGYPGRQGLAGPEGNPGPKGVRGFIGPPGAAGQPGPEGERGIPGQQ GKRGLKGRLGFPGDFGNRGPPGADGSPGVVGGVGPPGFPGLRGVVGPVGPSGPSGIPGPL GLPGSMGQPGMKGDKGEQGIAGEPGELGYPGDKGSVGLPGPSGIRGKPGPPGKIGDPGPQ GPSGPPGPEGFPGDIGVPGLNGPEGPKGLLGDRGPPGAPGPKGIEGEEGPVGLVGGVGPR GRPGRKGYAGEPGSEGLKGEPGDQGNLGKTGEAGPIGLPGEIGPAGIPGEKGERGSPGPV GPPGEKGVMGYPGPPGGFGPLGPQGLPGPSGPRGPPGPQGSKGRRGPRGLDGPPGEQGAQ GIKGESGDPGKKGVHGLIGKAGNPGEMGDSGVPGLPGPPGNTGDRGPMGEPGPRGQKGDA GPIGEMGFEGPPGPEGEPGLQGEPGAKGDIGPAGNAGETGEQGLRGEPGSPGEDGVQGKD GSKGIPGDQGLPGEDGEKGETGIPGITGPTGEPGIMGIPGSEGTPGNPGQTGRPGRKGGK GQLGPPGEIGATGEAGQPGEFGPNGARGTRGLLGHLGVMGPEGEPGIPGYMGHQGQPGSP GPPGPKGEKGYPGEDNTVLGPPGPIGEPGPSGERGDRGEPGDEGFKGHTGLPGLRGATGQ QGPPGEQGELGEQGPKGERGSEGPTGKRGMTGQAGKPGIPGKLGPPGQKGASGYPGPEGI PGNPGKPGLPGKPGFPGNKGSPGIAGLAGYPGTRGAKGLPGMPGISGEPGLKGEQGLQGH PGKPGKRGLPGVQGDQGPPGDPGLKGKTGELGDQGLMGFQGFPGPKGPDGDIGLVGILGP KGPVGQIGYTGPIGQEGIIGPTGKPGSRGEKGSRGEIGPQGPRGHPGPPGPPGVPGPRKQ MDINAAIQALIESNGALQMERYQNTEVNLLDHSAEIFKTLHYLSNLLHSIKNPLGTRDNP ARICRDLLNCERKVSDGKYWIDPNIGCPSDAIEVFCNFTAGGQTCVSPVSVTKLEFGVGK VQMNFLHLLSSEATHTITVHCLNTPVWGTNEADAQKTSVSFKGWNGQKFEANTLLEPKVL TDECMIQDGSWHKTEFLFHTQDTTDLPVVQVHTFPHLKPGQQQHIESGSVCFL NT seq 5202 nt NT seq  +upstreamnt  +downstreamnt atgcatttaggagcaaaaaggacaaggagtggaagcatctctcccacagcaaaaacgaaa accctcctcctttttcttgcgatatgcgtagctgtgggtgccgcacaaatgccagcacaa ggcatagatgttcttcatcagttaggccttggtgggaaagacatacaacatccatcagca gtgtctacaatgcccttgtcatctgttccgttacctcagggggttcgcttaacagcatca ggcgttgttttaaccagagatgcacacattgaatcccctatcactcaagtcataccatca agtctagggaatcagttcacattattgattgggctacactcttatagagtaaacaatgct tttcttttcagtattagggacaaaaacagactgcagtttggtgtacagttgctaccaaag aaggtagtggtatatattggagggaagcagtctgtatattttgattacagtattcatgat gaacaatggcattcatttgctattgacattagagacaagacagtctcaatgtttgctgag tgtggaaagaaatattacagcagggaaacactttctaaagtacagatatttgatttggat ggtttgtttaccttaggacggatgaactctcagtctgtcagctttgaaggagtaatatgt caactggatattatcccgtctgcacaagcctctgcaaactattgtaaatacgtaaaacag caatgtcgccaagctgaaacataccgatctttgccagcacctcccgacacatcagctggg gtgtctgtaaactttccaaggaaacagtttggtgacaacacccaatctgaacataaatca ttttatacacagaaagaagcattaaaccttcctattaacaacactgcaccaatccatacc ctaccagaatccttggcgttaagaactgttactccatcagagcttgcaaaatctgaacct cagtccacaacaattagacctgaagcaagtgtccaggaaaactttagtctgtcaattcat caacaggacttgagcaaaaagaggaatggcagcaaaaaaaaactgggatcacctcaaaat agttcagataatgccacagaagatgcaggtggaaaaagtgagctccccctcatttctttt gtaaaacagagtaagatcaaagatatgaaaacacaggtaaaggccaagcagcttttagat gaacccctggaaattcagcaaatcttaaacacaacactatacagggctactgtagacctg tctttggataatcagctcaatccatgggaggaaggtgcatttgatgctgatgagacttat gctgcagaaaacggttatgaaattgatgttgaaagttacaattatgattatgaagatctt aacaaagtgtttgaaatggagaattcaagagggccaaaaggagaaactggacctccaggt cccccaggtcctccaggtttacctggtctatcagggaagagaggtccaacggctcttata gtgctcacaaacatcagaataccaccaagtgttggttgttatttttttacattgaaaagt aggtcccgggccttacttttgtgtgctaagcctgaagctgacggtgttccagggccacat gggaatccaggtttgccaggggtgcctggtcaaaagggccctaaaggagatgcagcattc tccccaggacaagcaaaacgtggagaaaagggtgacccaggtccaagaggcttacttggc cctcctggtatcaaaggtcagaagggtcacaaaggctatccagggccaccaggtccacaa ggcgagcaaggaattccaggaatggctggcaatgctggttcacttggttaccctggcagg cagggtttagctggaccagaaggtaacccaggtcctaaaggtgtaagaggtttcattgga cctccaggggcggcaggacagccaggacctgaaggagaaagaggcattccaggacagcaa ggaaaaaggggtcttaaggggagactgggttttccaggtgactttggaaacagaggcccc cctggtgcagatgggagtcctggagttgttggtggcgttgggcctcctggatttcctggg ctgagaggtgttgttgggcctgtgggaccgagtggaccttctggaattcctgggcctctg ggtcttccagggagtatggggcagcctggaatgaaaggtgataagggtgaacaaggcatt gcaggagagccgggagagctgggatatccaggagacaagggttctgttggtttgccagga ccatcaggaatcagaggaaagccagggcctcctggaaaaatcggagatcctggaccccag ggaccatctggtcctcctgggcctgagggttttccaggagatattggtgtacctggacta aatggccctgaaggtccaaagggacttctaggtgaccgagggcctccgggggccccaggc ccgaaaggaattgagggagaagaaggaccagttggacttgttggaggagttggaccaaga ggaaggccaggtcggaaagggtatgcaggtgaacctggatcagaaggcttgaagggagaa ccaggagatcaaggaaaccttggaaaaactggtgaagcaggacccattggtttacctgga gaaattggacctgctggaatccctggtgaaaagggagagcggggcagtccaggaccagtg ggccctcctggggagaaaggtgtcatgggctatccaggacctccagggggctttgggcct ttagggccacaaggattgcctggtccttcagggccaagaggacctccaggaccacaggga tctaaaggacgaagaggtcccaggggtctagatggtcctccaggagaacaaggggcacaa ggtattaagggagaaagcggtgatccagggaaaaagggtgttcatggacttattggcaag gctggaaaccctggagaaatgggtgattcaggagtaccaggcttacccggacctcctgga aacacgggtgacagaggccctatgggagagccaggcccaagaggacaaaaaggtgatgct ggccctataggagaaatgggttttgagggacctcctggccctgagggagagcctggcctg caaggagaaccgggtgcaaagggagacatcggacctgctggcaatgctggagaaacagga gaacaaggtttaaggggtgaaccaggatccccaggagaagatggtgttcaagggaaagat ggctcaaaggggatccctggagaccaagggcttccaggagaggatggtgaaaaaggagag accggaattccaggaattacaggccccactggtgaacctggcataatgggtattccagga tctgaaggaacaccaggaaatccaggtcaaacaggtcgtccaggaagaaaggggggaaag gggcagctaggacccccaggagagattggagccacaggtgaagctggccaacctggagaa tttggtcctaacggcgcaagaggaactagaggtctattgggacatttaggagtaatggga cctgaaggagagccaggaattccaggttacatgggtcatcaaggtcagccaggatcacct ggtcctccaggacccaaaggagagaagggttacccaggcgaagacaacacagtactggga ccacctgggcccataggtgaaccaggtcctagtggtgaacgtggagatagaggggaacct ggtgatgagggattcaagggtcacacagggcttccaggtctaagaggagcaactggacaa caagggcctccaggtgaacaaggtgaattgggagaacaaggaccaaagggagagagagga tcagaaggtcccactggaaaaagaggaatgactggtcaagctgggaaacctggaattcct ggaaaactaggcccaccagggcagaaaggtgcttctggatatcctggaccagagggcatt cctgggaatcctggaaagcctgggttacctgggaagcctggctttcctggtaataaagga agcccaggaatagcagggctggcagggtatcctggaactcggggagcaaagggattgcca ggcatgccaggtatcagtggagaaccaggactaaagggtgagcaagggcttcagggtcat ccaggaaaaccaggtaaaagaggccttcctggggtacaaggtgatcaaggcccaccagga gatcctggattgaaagggaagactggagaacttggagatcaaggtttgatggggtttcaa ggattcccaggtccaaaaggtcctgatggggacattggtttagttggaattctgggtcct aaaggtcctgtaggccaaatcggatacactggccccattggtcaagaaggcataataggc ccaacaggcaaacctggatccaggggtgaaaaaggctccagaggtgaaattggccctcag ggaccacggggtcatccaggtccaccgggtccacctggggtacctggtccaagaaaacaa atggacatcaatgctgctattcaagcgttgattgaatcaaatggtgcactacagatggag aggtaccagaatactgaagtaaatttactagatcacagtgcagagatattcaaaacgcta cactaccttagcaatttactgcacagtatcaagaaccccctcggcactcgagataaccca gcacgcatctgcagggatttgcttaactgtgaacgtaaagtatcagatggaaaatactgg attgacccaaatattggatgtccttctgatgccattgaggttttctgcaacttcactgct ggtggccagacatgtgtatcacctgtatctgtgacaaagttggagtttggagttggaaaa gtgcagatgaactttcttcatttactgagctcagaagcaacccataccatcaccgttcac tgtctgaacacaccagtgtggggaacaaatgaggcagatgctcagaaaacatctgttagc ttcaaaggctggaatggtcaaaagtttgaagcaaatacactacttgaaccaaaggtgctt acagacgaatgcatgatacaagatggcagctggcataagacagagttcctttttcacact caggatactactgaccttccggttgttcaagtgcatacgtttcctcatctcaaaccagga caacagcaacacatagaaagtggttcagtgtgctttctctaa

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