Caretta caretta (Loggerhead turtle): 125641887
Help
Entry
125641887 CDS
T09292
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125641887 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125641887 (VCAM1)
04090 CD molecules [BR:
ccay04090
]
125641887 (VCAM1)
04091 Lectins [BR:
ccay04091
]
125641887 (VCAM1)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
VCAM
125641887 (VCAM1)
CD molecules [BR:
ccay04090
]
Proteins
125641887 (VCAM1)
Lectins [BR:
ccay04091
]
I-type lectins (Siglecs)
125641887 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C2-set
Ig_5
Ig_6
TrkA_C
ICAM_N
ICAM1_3_5_D2
C1-set
Herpes_gE_N
CIDE-N
Motif
Other DBs
NCBI-GeneID:
125641887
NCBI-ProteinID:
XP_048718375
LinkDB
All DBs
Position
8:70088336..70101066
Genome browser
AA seq
715 aa
AA seq
DB search
MGRIIPSVTVLLLVFVTSKAFEIEVTPEYNVAAQIGDKLELTCSTIGCESPSFSWRTQMD
NPLGGSVYNNGSSSTLTMDPVGFGNDHEYLCSAFCDNVKKEKSIKVDVYSFPSAPVIEIS
TPLNVGEKASATCMVPKVYPSERLKLQLEKDGSVLDMKEFYEEVSTKTTETKSLTLTFIP
TFEDIGKEITCVAELEIDEMEFEPKKRQTSQRLSVNFGPQNANITVSPSNITTQGETLML
TCRTTSNPPARIVWGKELEDSSVQHIIDNDTLIIPHAQMSDSGLFICEAMNDATNKTERA
TVVISVQGAPRITEFSIQPSTTVQEGDNVTILCSVESNPAARIVLRRKSDSEDTVLYSED
GVVHISSVTFLNAGNYECEAENALGESKMAAELSVEYGPRNTTISVTPSTTVKEGEAVIM
TCTSYGNPTPKISWTKHLISGELQFLSEDATLTINNIKAEHLGLYECEGVNQFGREKKTV
NLIVQVPPKDTMLSVFPSDTVKEGDSVTFSCTSEGIPAVQIILRKKSGGADTVLVSESGR
YTIDGAQLEDAGMYECESSNKLGQQFKNRMLDVKVPPQNTTELISPSDNVDEGENITIMS
TTYSNLPPQTVPQKIHPSNTTILSSQNETSTLCRVIKTDTDTYLVACNETGNNTDVIEIA
VVEIVKETDLMIPVIVVLSCLSTMAIPALAILVYMSRKAKINGSYSPVNTPKPNV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaataattccatcagtgacagtgcttttactggtgtttgtgacttctaaagct
tttgaaattgaggttacacctgaatacaacgttgctgctcagattggagataaacttgag
ctgacctgtagtacaattggctgtgaatccccaagtttctcttggagaacccagatggac
aatcccctcggtgggtcagtgtacaataacgggagcagctccaccttgactatggatcct
gttggctttgggaatgaccatgagtatctctgcagtgcattttgtgacaatgtgaaaaaa
gaaaaaagcatcaaggttgacgtttactcttttcccagtgcaccagtcattgagatcagc
acacccctgaatgttggggaaaaagccagtgccacctgtatggttcccaaagtgtatcct
tctgagcgtttgaagttgcagctagagaaagatggatctgttcttgacatgaaagagttt
tatgaggaagtaagcaccaaaaccacagagacaaaaagtctgacattgacttttatcccc
acctttgaagacattgggaaagagattacttgtgtggctgaattagagattgatgaaatg
gaatttgaacccaagaaaagacagacttcacagagattgagtgtaaactttggtccacaa
aatgctaacatcactgtgtctccaagcaacataaccacgcagggggaaacgctaatgctc
acttgcaggactacaagtaatccaccagcaaggattgtttggggaaaagagctagaggat
tcaagtgtgcagcacattatagacaatgacaccctaatcattccacatgcccagatgagt
gattctgggctgttcatctgtgaagccatgaatgacgcaacgaataaaacagagagagca
acagtggtcatttctgtacaaggggcaccaagaattacagagttctccatacaaccctcc
acaactgttcaagaaggagataatgttaccatcctgtgttctgttgaaagcaaccctgct
gccaggattgtcttaaggagaaaatcagacagtgaagacactgtgctttatagtgaggat
ggagttgtccatatctcaagtgtgacgttcctaaatgcaggaaactacgaatgtgaagca
gagaatgcactgggggaaagcaaaatggcagcagaacttagcgtcgaatatggaccaaga
aatacgacaatctctgtcaccccctccaccacagtgaaagaaggggaagctgtgataatg
acatgtactagctacggtaatccaactccaaagatctcctggacaaagcatttgatcagt
ggagagttgcagtttctttctgaagatgcaactttgactataaataacataaaggctgaa
cacttggggctttatgaatgtgaaggagttaaccagtttggaagagagaaaaaaactgtg
aacttaattgttcaagttccaccaaaagacacaatgctttcagttttcccttcagacact
gtaaaagaaggagacagtgttaccttctcttgcacatctgaaggtattccggctgttcag
atcatcttgaggaagaaatcaggaggtgcggacacagtgcttgtgtccgaaagtggcaga
tataccatagatggggctcagctagaggatgcaggaatgtatgaatgtgaatccagcaac
aagttgggacagcaatttaaaaacagaatgcttgatgtcaaagttcctccccagaatact
acagagttaatatctccatcagacaatgttgatgaaggggaaaatatcactattatgagt
acaacctatagtaatttacctccacagactgtcccacaaaagatccatccaagcaacaca
accatcctctcatcacagaatgaaacctctacgctctgtagagtcatcaaaactgataca
gacacatacctggttgcttgcaatgagactggaaataacactgatgtgattgagatagct
gttgtagaaatagtgaaagaaacagatttaatgattcctgtgattgttgtgctctcttgt
ttatcaacaatggcaatccctgcacttgcaatattggtttacatgtcaaggaaagcaaag
ataaatggatcctacagtcctgtaaacacaccgaaaccaaatgtttaa
DBGET
integrated database retrieval system
