Caretta caretta (Loggerhead turtle): 125641983
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Entry
125641983 CDS
T09292
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125641983 (TRMT13)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
125641983 (TRMT13)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125641983 (TRMT13)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
OrgC
TIP120
Motif
Other DBs
NCBI-GeneID:
125641983
NCBI-ProteinID:
XP_048718652
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All DBs
Position
8:complement(70199920..70211462)
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AA seq
448 aa
AA seq
DB search
MIPAQGRRFCGEHGDQEEENDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPAYFVQ
DINAGLKDATEILDEQQLPISSLSREELEDLIRKLKKASNGIKPILKDQKLSHQALQEAL
NDPKNGESALKHLKQQASILGNMEKLQLLGPGRCFIEFGAGRGKLSHWVDIALQDAANVH
FLLVERATTRFKVDGKHRKRDYIFERLQVDIQNLCLNKVPILKKEKLPVVGIGKHLCGAA
TDLALRCLVESYATQYDERNEDPSPKRFKSDKTDLAFNNSADERSGKNVSENWNPVAGIV
IALCCHHRCQWKHYVGQEFFRTVGLGPVEFNYFQRMTSWATCGMQETITEASTIDAKSKD
QSSDTEEHDQVNNRIECSSDSLQGLLTVEERKQIGRLCKLLIDQGRIKYLQQRGYNAALQ
YYTDSTVSLENVLLTAVPSQSSVPQPTA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggctcaggggagacgcttctgcggggaacacggagaccaggaggaagaaaat
gacaggaaaagaattccatgcccacttgacccaaaacacacagtatatgaagatcaatta
caaaagcatttaaaaaagtgtaattcaagagagaagccgaagcctgcctactttgttcaa
gatattaatgcaggattaaaagacgcaacagaaatacttgatgaacagcagttgccaatt
tcttccctgtctagagaagagttagaggacttaattagaaagctgaaaaaagcaagtaat
ggtataaagccaatacttaaggatcaaaagctgtcccatcaggccttacaagaagcttta
aacgacccaaagaatggagagtctgctttaaagcacttgaaacaacaggcttccatttta
ggtaacatggaaaagttacaattgcttgggccaggaagatgttttattgagtttggagct
ggacgaggaaagctgtctcactgggttgatattgccttacaagatgctgcaaatgttcac
tttctgcttgttgaaagggcaactacacgattcaaggtagatggtaaacacagaaaaaga
gactacatatttgaaaggcttcaagttgatatccagaacttatgtttaaataaagtacct
attcttaaaaaagaaaagcttcctgtggtaggaattggaaagcatttatgtggtgctgca
acagatcttgctctgagatgtttggttgaaagttacgcaacccaatatgatgaaagaaat
gaagacccttcacctaaacgtttcaagagtgataaaacagacctagcttttaacaattct
gctgatgaaaggagtggaaagaatgtttcagaaaactggaatcctgtagctggaattgtt
attgcactgtgttgccaccacaggtgtcagtggaagcattatgtaggccaagagttcttt
agaacagtgggacttgggccagtggaatttaattattttcagagaatgactagctgggcc
acttgtggcatgcaagaaaccatcactgaagcctctaccattgatgcaaagagcaaagac
caaagcagtgatacagaagaacatgaccaagtaaacaacagaattgagtgcagttctgat
agtctgcaagggctacttactgttgaagaacgaaagcagataggtcgtctttgtaaactc
ttgattgaccagggacggatcaaatatttacaacagagaggatacaatgctgcattacaa
tactatacagattctactgtttccttggagaatgtactcttgacagctgtaccaagtcaa
tcttcagtacctcagccaactgcataa
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