KEGG   Caretta caretta (Loggerhead turtle): 125642130
Entry
125642130         CDS       T09292                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125642130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccay03041]
    125642130
Spliceosome [BR:ccay03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125642130
 Complex B
    125642130
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 125642130
NCBI-ProteinID: XP_048718907
LinkDB
Position
9:complement(31858933..31930902)
AA seq 996 aa
MADKTPGGSQKTSAKVRLPDAVQTTGSADSHPLLENKLKAFSIGKMSAAKRTLSKKEQEE
LKKKVMEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGIVNASKDEHETDEKRGKIYKPS
ARFADQKNPPNQPSSNEKPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDE
RHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGN
INPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNG
KMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLP
PPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFR
FLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQE
TEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITES
LSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGH
LQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKEIEEVPDDLDGAPIE
EELDGAPLEDVDGIPIDAAPIDDLDGIPIKSLDDDLDGVPLDTSEESKKNEPIFKVAPSK
WEAVDEAELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEQHMYSNP
IKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYR
DKLLQRLFLITQEKEKELERERERDKKDKEKSESRSKDKKEKEECTPTRKERKRRHSTSP
SPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPK
RSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq 2991 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcgggtcgcagaaaaccagtgcgaaggtcagactgccagat
gcggtacaaacaactggatctgccgatagtcaccctcttttggaaaacaaacttaaagca
ttcagtattggcaaaatgagtgctgccaagaggactttaagtaagaaggaacaagaggag
ttaaaaaagaaggtaatggaggatgagaaggcagctgcagaaatttatgaagaattcctt
gctgcctttgaaggaagtgatggtaataaagtgaaaacatttgtaagaggaggaattgtt
aacgcgtctaaagatgaacatgaaacagatgaaaaacgaggtaaaatctacaaaccttca
gcacgatttgcagatcaaaaaaatccgccaaatcagccatcctctaatgagaagcctcca
tcccttctaatgatagaaaccaaaaagcctcctttgaagaagggggagaaagaaaagaaa
aagagcaatttagaactcttcaaagaagaactaaaacaaattcaagaggagcgtgatgaa
aggcataaaacaaaaggtagattaagtcgttttgagccacctcagtcagattcagatggc
cagcgccgttccatggatgctccttcaagaagaaacagatcttctggtgtactggatgat
tacgcaccaggctcacatgatgttggagatccaagcacaacgaatttgtaccttggaaac
attaatcctcagatgaatgaagagatgttatgtcaagaatttgggcgctttggaccatta
gctagtgttaaaattatgtggccaagaaccgatgaggaaagagcaagagaaaggaactgt
ggttttgttgcctttatgaacaggagagatgctgaacgagcattaaagaatttaaatggc
aagatgattatgtcctttgaaatgaagctaggttggggtaaagctgtaccgattccacca
cacccaatatacattccaccttccatgatggaacacaccctcccaccacctccatcagga
ctgccttttaatgctcagcctagagagagattgaagaaccctaatgctcccatgttacca
ccaccaaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgcattgatacatcgaatgatagagtttgtggtacgt
gaaggacctatgtttgaagccatgatcatgaaccgagaaatcaacaatccaatgttcagg
tttttgtttgaaaaccaaactccagcccatgtatattacagatggaagctttattcaatt
ttacagggagacgctccaaccaagtggaggacagaagattttcgtatgttcaaaaatgga
tcattttggaggccaccaccattaaatccgtacctgcatgggatgtcagaagagcaagaa
actgaagcgtttgtagaggaacctaacaagaagggtgcacttaaggaggagcagagagac
aaattagaggaaatcctgcgtggattaacgcctcgtaagaacgatattggcgatgcaatg
gttttctgtcttaataatgctgaagctgctgaagaaattgtagactgcattactgagtca
ttgtccattctgaagactcctcttcctaaaaagattgcaagattatatttggtgtcggat
gtgttatacaactcttcagctaaagttgccaatgcttcatattatagaaaattttttgaa
acaaaattatgtcagatattttctgatctcaatgctacctaccgtacaatacaaggccat
ttacagtctgaaaatttcaagcaacgggtaatgacatgcttcagagcatgggaagactgg
gcgatttatccagaaccctttttgatcaaactgcagaatattttcttgggacttgtaaat
attatagaagaaaaagaaatagaggaagtaccagatgatctcgatggagctcccattgag
gaagagcttgatggtgcaccactggaagatgtagatggaattcctattgatgctgctccg
atagatgatcttgatggaatccccattaaatcacttgatgatgatcttgatggtgtacct
ttggatacttctgaagagtctaaaaagaatgagcccatattcaaagttgccccttcaaaa
tgggaagcagtggatgaagcagaattggaagctcaggctgttacaacttctaaatgggag
ttgtttgaccagcatgaagaatcagaagaggaagaaaatcaaaatcaagaagaagaaagc
gaagatgaggaggatactcagagttctaaatcagaagagcagcatatgtattccaatccc
atcaaagaagaaatgcctgaatcaaagtcatcagtcaagtactctgaaatgagtgaagaa
aagcgtgccaaactcagagagattgagcttaaggtgatgaaatttcaagatgaattggag
tctggaaaaagacccaagaaaccaggccagagttttcaggaacaggttgaacactataga
gacaaacttcttcagaggttgtttttaataactcaggaaaaagaaaaggagctggaaaga
gaacgagagagagacaagaaagacaaggaaaaatctgaatccagatccaaagacaagaag
gaaaaagaagaatgtacaccaacaagaaaagagaggaaaagacgacacagtacatcaccc
agtccatctcgcagcagtggcagtagacgagcaaaatccccatcaccaaaatcggagcgc
tcagagcgatctgaaagatcccacaaagagagctcacgttccaggtcatctcacaaagat
tctcctagagatgtcagtaaaaaagccaaacgatcaccctctggctcaaggacacccaaa
agatcaagaaggtcacgatccaggtcccctaaaaagtcagggaaaaaatccaggtcgcag
tcccgttctccacacagatctcacaagaagtcaaagaaaagcaaacactga

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