Caretta caretta (Loggerhead turtle): 125642154
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Entry
125642154 CDS
T09292
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125642154 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
Other domain-containing proteins
Patched domain-containing proteins
125642154 (PTCHD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
125642154
NCBI-ProteinID:
XP_048718971
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All DBs
Position
1:141825007..141876824
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AA seq
911 aa
AA seq
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MILPRLRESFRSHLALLSSLCTRMLRQVLHRGLRTSFSRLGHFIASHPVFFASAPVLISI
LLGASFSRYQIEESVEYLLAPKHSLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVI
ITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVL
EELKSARSSNRTNFVITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQA
INSLNDMVAEKWESIFRDTVELFQKSNRKVKMYPFTSSSLREDFQKTSRVSERYLTTSLV
LVVTLAILCCSMQDCVRSKPWLGLLGLLTVSLATLTAAGIINLTGGKYNSTFLGIPFIML
GHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIE
AARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWY
RFLLTAKFSEDTTDSEEPNTYESHLLVCFLKRYYCDWITNTYVKPFVVLFYLVYISFALM
GYLQVNEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLE
YTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKAPQYAHFSEDIIFSKKYN
NEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVG
APLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCL
IYGINYTIDNCAPLLSTFILGKDFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPS
NLTRTLFRCLFLIALVTFFHCFAILPVILTFVPPSKKKRKEKKNPENREEIECVEMVDMD
STRVVDQITTV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgattttgcctcggctccgggagagcttcagatcgcacctcgccctcctgagctccctc
tgcactaggatgttgcggcaggttttgcacagggggctgaggacgtctttttccagactc
ggccacttcattgccagtcacccggtgttcttcgcctccgcacctgtgctgatctcgatt
ttgctgggcgccagcttcagcaggtaccagatcgaggagagcgtggagtatctcctggcc
cccaaacacagcctggccaagatcgagaggaacctggtgaacagccttttcccggtgaac
cgctccaaacaccggctctactctgacctgcagacccctgggaggtacggcagggtcatc
atcacatccttcaggaaggcgaacatgctggaccaacatcatactgatctgatcttaaag
ttgcactcagctgtgaccaggatccaagtacaaagacctggtttcaattacacatttgcc
catatatgtatcctgaataatgacaagacttgcatagtggacgacatagtgcatgtactg
gaggagctaaagtctgctcgatcttctaatcgaactaattttgttatcacatatccaatc
actcacttaaaggatggcagggaagtgtataacgggcaccagcttggcggggttaccgtg
cacagcaaagatcgggtgaagtctgcagaagccatccagctcacctactacttgcaggcg
atcaactctctgaatgacatggtagcagaaaagtgggaatccatctttcgtgacactgtc
gaacttttccagaaatccaacaggaaagtcaaaatgtatcccttcacttcgtcttcgctg
agggaggatttccaaaagacgagcagggtgtcagaacgttacctgaccacaagcctggtc
cttgtggtcactttggccatactctgctgttccatgcaggattgtgtccgcagcaaacct
tggcttggccttttaggattgttaacggtgagcttagccacactgactgcagctggaatc
atcaatctgactggtgggaaatacaattccaccttcctgggaattcccttcatcatgtta
ggtcatgggttatatgggacttttgaaatgttgtcctcctggaggaaaactagagaagac
caacatgttaaagagagaactgcagctgtgtttgcagactccatgctctccttttctctc
accactgccatgtacctggtcacttttggaataggtgccagtcccttcactaacattgaa
gcagctaggattttctgctgcaattcctgtattgcaattttcttcaactacctctacgta
ctctccttttatggttccagcctggtgtttactggctacatagaaaacaactaccagcat
agtatcttctgcagaaaggtaccaaagccagaggtgttgcaagagaagcctgcgtggtat
aggtttcttctgacagccaaattcagcgaggacacaaccgattcagaggaaccaaatact
tacgaaagtcatcttttggtgtgtttcctcaaacgctattactgtgactggataacaaac
acttatgtcaagccttttgtagttctcttttaccttgtttatatttcctttgccttaatg
ggctacctgcaggtcaatgaagggtcagaccttagtaacatcgtagcaaccgcgacacga
accattgaatacactactgcccagcaaaagtatttcagtaactacagcccagtcattggg
ttttatatctatgagtcaatagaatattggaacacaagcgttcaagaagatgtgctagag
tatactaaagggtttgtgaggatatcttggtttgagagctatttaaattatctaaggaaa
ctcaacatatctactggattgcccaaaaagaattttactgacatgttgaggaactcattc
ctgaaagccccccagtatgcccatttttcagaggatatcatcttttcaaagaagtacaac
aatgaagttgatgtagtggcttctaggatgttcttggtggctaagacaatggaaaccaag
agagaagaactttatgatctcctggaaaccttgaggaaactctctctcacatccaaggtg
aaattcatcgttttcaatccatcatttgtgtacatggatcgttatgcctcctcagtggga
gcccccttacaaaactcctgcatcagtgctttatttctgctcttcttctcggcattcctg
gtggcagactctctaatcaatgtctggctcactctaactgttgcctcagtcgaatttgga
gtcataggtttcatgactttgtggaaagtggaactggactgtatttctgtgttgtgctta
atttatgggattaattatacaattgacaactgtgcaccactgttatcaacctttatcctg
ggcaaagatttcacaagaactaaatgggtaaaaaatgccctagaagtgcacggggtagct
attttacagagctacctctgctatattgttggtctgattcctcttgcagctgtgccttca
aatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcac
tgctttgccattttacctgtgatactgacttttgtgccaccatccaagaaaaaaaggaaa
gagaagaagaatcctgaaaaccgtgaggaaatagagtgtgtcgaaatggtggatatggat
agtacccgagtggttgaccaaattacaacagtttga
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