Caretta caretta (Loggerhead turtle): 125642193
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Entry
125642193 CDS
T09292
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125642193 (TRPC1)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125642193 (TRPC1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
LHD_TRPY1
Eno-Rase_FAD_bd
MTR4-like_stalk
Motif
Other DBs
NCBI-GeneID:
125642193
NCBI-ProteinID:
XP_048719065
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Position
9:complement(32048372..32095762)
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AA seq
781 aa
AA seq
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MAALYQSSDPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEQNSS
GDMNINCVDVLGRNAITITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFR
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWISSHTSTGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSMDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagctcggacccgtccgcctcggcctcccccaacaagctgctg
gcgctgaaggacgtgaggcaggtgaaggaggagaccaccctggacgagaagctcttcctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcttggagcagaacagctca
ggtgacatgaacataaattgtgtggatgtgcttgggagaaatgctataaccattaccatt
gaaaatgaaaacttggacatactacagcttcttttggattatggctgtcagtctacagat
gcacttttggtggcgattgactcagaagtggtgggagctgttgatatattacttaatcat
cgaccaaaacgatcctcaagaccaactattgtaaaacttatggagcgtattcagaaccca
gagtactcaacaactatggatgtagcacctgtcattctagctgctcatcgtaacaactat
gaaatccttactatgctgttaaaacaggatatatctctacccaaacctcatgctgttggc
tgtgaatgcaccttgtgcacagcaaagaacaaaaaagatagcctacggcactccagattt
cgtcttgacatctatcgttgtttggccagtcctgccttaataatgttgacagaggaagat
ccaatcctgagagcttttgaacttagtgcagacttaaaagagctaagtcttgtcgaagtt
gaattcagaaatgattatgaggaactagcccagcaatgcaaaacctttgctaaagatttg
cttgcacaggcacggaactcacgggaactggaagttatcctaaaccatacagctagtgat
gagcatgtggacaaacgaggattgttagaagagaggatgaatttgagtcgcctaaaactt
gctatcaagtataaccaaaaggagtttgttgcccagtctaactgccagcagtttctcaac
actgtgtggtttggacagatggcaggctaccgacgcaagcacacgtgtaagaagattttg
actgttttgacagttggcatcttttggccagttctgtctctctgttacttattagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacgttcctgctattacttaacttgtattcattggtctacaatgagaataag
aagaatacaatggggccagcacttgagagaatagactatcttctgataatatggcttatt
ggaatggtgtggtcagatgtcaaaagactttggtatgaaggcctggaagactttttagaa
gaatctcgtaatcagcttagttttgtcatgaattccctctatttggcaacctttgctctc
aaggtagttgctcataacaagttccatgattttgctgatagaaaggactgggacgcattc
catcctacattggtggcagaaggtctctttgcttttgctaatgttcttagttaccttcga
ctcttcttcatgtacacaaccagttctatcctaggaccacttcagatttcaatggggcag
atgttgcaagactttggaaaattcctagggatgttccttcttgtcttgttctcattcacg
attggattgacccaactgtatgacaaaggatttactgtaaatgaagagaaagactgtgca
gggatcttctgtgaacagcaaagcaatgacacattccattcgtttattggcacctgcttt
gctctgttctggtacatattctccctagcacatgtagcaatctttgtcactagatttaga
tatggtgaagaattgcagtcttttgtgggcgctgttattgttggtacctacaacgtagtg
gttgtgattgtccttaccaagctcttagtggcaatgcttcataaaagctttcagctgata
gcaaatcatgaagacaaagaatggaaatttgctcgtgccaagctttggcttagctacttt
gatgataaatgcacactacctccacctttcaatgtcattccttctcccaagactatctgc
tatctcttcaacagccttagtaaatggatcagctctcatacttcaactggcaaagtcaaa
cgtcagaatagcctaaaggaatggagaaatctgaagcaaaagagggatgagaattaccaa
aaggtgatgtgttgtttagtccatcgttacttaacctccatgagacaaaagatgcaaagc
atggatcaagcaactgtggaaaatctcaatgaactgcggcaagatttatcaaaattccga
aatgaaatgagggatctgcttggctttcggacatctaaatatgctatgttttatccaaga
aattaa
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