Caretta caretta (Loggerhead turtle): 125642202 Help Entry 125642202         CDS       T09292                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay03013   Nucleocytoplasmic transport ccay03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccay00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     125642202 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     125642202 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccay03019]     125642202 (THOC2)    03041 Spliceosome [BR:ccay03041]     125642202 (THOC2) Messenger RNA biogenesis [BR:ccay03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      125642202 (THOC2) Spliceosome [BR:ccay03041]  Complex C   Other components    EJC/TREX     125642202 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     125642202 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  125642202 NCBI-ProteinID:  XP_048719090 LinkDB All DBs Position 9 Genome browser AA seq 1611 aa AA seqDB search MAAAGALPAEWIKNWEKSGKSEFLQLCRTLSENKSHENVTFRDIQQALYELANHVVKGNL KHDQASNVLSDVIEFRDDMSSILADVFCVLDIETSCLEEKSKRDHFTQLVLACLYLVSDT VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMCEP QTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPVDNAILEEHKR EIVEAKQIVRKLTMVVLSSEKTEEKEKEKDKEEEKTEKPPDNQKLGLLEALLKVGDWQHA QSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISNLQNKRAPKQA ESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTSKKLNSEDRMVKFQSD GNKQEDKEKMEILFSCLLNITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQYRYRLYGQ WKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQ IQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFC GAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGG EQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLV GKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHI SSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWS LTMYDLAVPHNSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQL EHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQ KTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRNIYEKECGN YPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIV LTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEF HHKDPPARNAVAATVQNGPGGAGLPASLTINAAKLEESTTEETDKLKEKTQGAVKVINKA ANATPKVTTSNGNSASNSKIIKEKDEKEKSGKEKDKEKKEKTPAAIPEAKALGKDGKDKP KEERANKDDKTREIKEKTPKSDKEKEKAKKEEKTPKEEKSKTVVTNAESKFAAEKEREKE PSREKDVAKDMKSKENIKGGEKLSVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSS TVKDSLSELKDSSAKHYINHTAPALSKSKEREVEKKDLDKSRERSREREKKDEKDRKERK RDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKG DSVKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSAGGKEEKKHHKSSDKHR NT seq 4836 nt NT seq  +upstreamnt  +downstreamnt atggcggcggcgggggcgctccctgccgagtggataaagaactgggagaaatcgggcaag agcgagtttttgcaattatgccgcacactcagtgaaaataaaagccatgaaaatgtgact ttcagagatatccagcaggctctgtatgagcttgcaaatcacgttgtcaagggaaactta aagcatgatcaagcttctaatgttctcagtgatgttatagaatttcgagatgacatgtcc tccatccttgctgatgtattctgcgtattggatatcgaaacaagttgtttagaagaaaaa agcaagagagatcattttacgcaactggtgttagcctgtttgtaccttgtttcagacacc gtcctaaaggagcgtctggatccggaaacactggaatcattagggctcatcaaacagtct cagcagtttaatcagaaatctgttaaaatcaagacaaaacttttttataaacaacagaaa tttaacttattaagagaagagaatgaaggttatgcaaagctgattgctgaactggggcaa gatttatccggcaatatcactagtgatttaatcctagaaaatatcaaatctttaatcgga tgttttaacttggatcccaacagagttttggatattatcttagaagtctatgaatgtagg ccggaatatgatgaattctttgtacctttgatagaatcgtacatgtatatgtgtgaacct caaactctgtgtcatatccttgggttcaaattcaaattctatcaggaaccaaatggtgaa acaccttcctctttatacagagttgctgcagtacttttgcaacataatcttatagatttg gaagatctttatgtacatcttcttccagtagataatgccattcttgaagaacacaaacga gagattgtagaggctaaacaaattgttaggaaacttacaatggtggttttgtcctctgaa aagactgaagagaaagagaaggaaaaggacaaggaagaggaaaaaactgaaaagccacct gacaaccagaaacttggtttgttggaagctttgctaaaagttggtgattggcagcatgca caaagtattatggatcaaatgcctccattttatgccacttcacacaagcctattgccatt gccctttgccagcttgtacatgtgaccattgagcctttgtaccgcagagttggagtacct aaaggggctaaagggtcaccaatttccaatttgcaaaataagagagccccaaaacaagca gaaagttttgaagatttgaggaaggaagtgttcaacatgctttgttatcttggtcctcat ctctcccatgatcccattttatttgcaaaagtggttcgcttaggaaaagcatttatgaaa gaggttggaacttcgaagaaactgaacagtgaggacagaatggttaagtttcaatctgat ggaaataaacaagaggataaagagaaaatggagatcttgtttagctgtttgttaaatatt accgaccaagttttgctcccatctcttactctaatggactgcaatgcatgcatgtcagag gaactctggggaatgttcaaaacttttccataccagtaccgctatcgtctctatggacaa tggaagaatgaaacatacaacagtcacccacttctagtgaaagttaaagctcaaaccata gacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtgaagccttctggaaga caaattgggaagctaagccatagcaatccaacaattctatttgattatattttgtcacaa atacaaaaatatgataatttaattacaccagttgttgattcattgaaatacctcacttca ctgaactatgacgtcttggcatactgcatcattgaagctctggcaaatcccgagaaggag agaatgaaacatgatgacactacaatttctagctggctgcagagtctagctagtttttgt ggtgcagttttccgaaaatatccaattgaacttgctggtctactgcagtatgtagcaaac caactaaaggctggaaaaagctttgacttgctcattttaaaagaggtggtacaaaaaatg gctggaatagagataacagaagagatgacaatggagcaactagaagctatgactggtgga gagcagctaaaagctgagggtggatattttggccagatcagaaacactaaaaaatcttca cagagattaaaagatgcattgcttgaccatgatctggcccttcctctgtgcctgcttatg gctcaacagcgaaatggtgtgatctttcaggagggaggggaaaaacatttgaagctggtg gggaagctgtatgatcagtgccatgatactctggtacagtttggtggatttttagcatcc aatctaagtacagaggattacattaagcgagtgccttctattgacgttctctgtaatgag tttcacacaccccatgatgctgcatttttcctctccaggcctatgtatgcacatcatatt tcatcaaaatatgatgaacttaaaaaagctgagaagggaaacaaacagcagcacaaagtt cataagtacatcacatcatgcgagctagtgatggctcctgttcatgatgctgtgatctcc ttgcaccttcctaaagtttgggatgacatcagccctcagttctatgctacattttggtct ctgacaatgtatgaccttgctgttccacataatagctacgacagagaagtcaataaactt aaagtccagatgaaagctatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa gaaaaagaacgttgtacagcccttcaggacaagcttcttgaagaggagaagaagcaattg gagcatgtgcagagggttctacagagactgaaactggaaaaggataactggcttctggca aaatcaaccaaaaatgagactatcacaaaatttctacagttgtgtatatttcctcgctgc attttttctgcaatcgatgctgtttactgtgctcactttgtagaactggtgcatcaacag aaaacacccaatttttccacacttctctgttatgatagagttttctcagatataatatat acagtagcaagttgcactgaaaatgaagctagtagatatggcaggtttctgtgctgtatg ctagagactgtgactaggtggcacagtgatagaaacatatatgaaaaggaatgtggcaac tatccaggcttccttaccatattacgggcaactggatttgatggtgggaacaaagctgat cagttagattatgagaactttcgacatgtagtacacaaatggcactataaattaactaag gcttctgtacactgccttgaaacaggcgaatatacacatatcagaaatatcctgattgtg ctgaccaaaatccttccctggtatccaaaagttctgaacctgggtcaggccttggaaaga agagtacataagatctgtcaggaagagaaagagaagagacctgatctatatgcattagct atgggctattctgggcaattgaaaagtagaaagccttatatggtaccggaaaatgaattc catcacaaagacccacctgccaggaatgctgtagctgcaacagtgcaaaatgggccaggt ggtgctgggctgcctgcatcactcacaataaatgcagctaaactggaagaaagcactact gaggagactgacaaactaaaggagaaaactcagggtgctgtgaaagttattaataaagcc gccaatgcaacaccaaaagtgacgacaagcaatggaaacagtgcttctaacagcaaaatt attaaagaaaaagatgagaaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaa aagactccggctgccattcccgaggccaaggcacttggaaaggatggaaaagataaacca aaggaagaacgggcaaacaaagatgataaaacgagagagatcaaggagaaaacaccaaaa tctgacaaagagaaggaaaaagccaagaaagaagaaaaaacaccaaaagaggaaaaatcc aagacagttgttaccaacgctgagtcaaagtttgctgcagaaaaggagagagaaaaggag ccatccagagaaaaagatgtagcgaaggatatgaaatccaaggaaaatattaaaggagga gaaaaattgtcagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagag tctgaaagggaacaaaaacgtcgcaaagttgatacccattcttctccatcacattcctca acagtaaaggacagcctcagcgaactcaaggactcttcagcaaagcactacattaaccac actgctcctgcactgtccaagagtaaggagagagaagtggagaagaaagatttggacaag tccagggaaagatccagagagagagagaagaaagatgaaaaggataggaaagagcgaaaa agggatcattcaaatagtgaccgggaggtgccacaggactcaaccaaaaggcgtaaagag gaaaatggaacaactggttcttcaaaacatagtaaaagtgaaagtccatctgattcccct cgttcaaatgagaaggaaaaggagaagaataaatcaaaatcttcaggcaaagaaaaaggt gattcggtcaaaactgaaaagatggagaaaagttcctctggtagcaaaaaggagtctaga catgataaagaaaaaacagaaaaaaaggaaaaacgggacagtgctggagggaaagaagaa aagaaacatcataaatcttcagacaagcacagataa

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