Caretta caretta (Loggerhead turtle): 125642208
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Entry
125642208 CDS
T09292
Symbol
STAG1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125642208 (STAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125642208 (STAG1)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125642208 (STAG1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
RFX5_DNA_bdg
Motif
Other DBs
NCBI-GeneID:
125642208
NCBI-ProteinID:
XP_048719104
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All DBs
Position
9:48132253..48508511
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AA seq
1258 aa
AA seq
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MITSDLPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPSANKKPRKSPGDKSRS
EPGTRGIGRGRANGHPQQNGEGGDPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLD
LINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFC
EFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALN
LSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHR
YRDAIAEIRAVCIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYT
NRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHL
VYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHE
HAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEA
HPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIIALPMLLSKYSADAEKVANLLQIPQYF
DLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIAHS
QLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFSNCYRL
LRTGIEHGAMPEQIVVQALQCSHYSILWQLVKITEGSPSKEDLLVLRKTVKSFLAVCQQC
LSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDSGLQSELLSFVMDHVFI
DQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYND
YGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRF
ALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDK
KTVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKASSVRNKK
GRPPLHKKRVEDESLEGSWLNRNDTIQTPGALQTPQLTSTVLRENTRQMGEQIQEHESEH
GSEQDFLHNPQMQISWLGQQKLEDLNRKDRTGMNYMKGRSGVRHAVRGLMEDDAEPIFED
VMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagatttgccggtgttacaggattcaacaaatgaaactactgcacattca
gatgctggcagtgagcttgaagaaacagaagtcaaaggaaagagaaaaaggggccgtcct
ggcaggcctccatctgccaataagaaacctcgaaagtctccaggagataagagccgttct
gaacctggaactagaggaataggtcgtggaagagctaatggtcaccctcaacagaatgga
gaaggcggggaccctgtcactttgtttgaggtggtgaaactggggaaaagtgcgatgcag
tctgtggtggacgactggattgaatcatataaacaagacagggatatagcacttctggat
ttaatcaacttctttatccagtgttcaggatgtcgaggtactgtaagaattgaaatgttc
aggaacatgcaaaatgcagaaatcatcaggaaaatgactgaggaatttgatgaggacagt
ggtgactaccctcttaccatgcctgggccacaatggaaaaaatttcgatcaaacttttgt
gagttcattggagtgctgattcgacagtgtcagtatagcatcatttatgatgaatatatg
atggatacagtgatctctcttctgactggtttgtcggattcccaggtccgagctttcagg
cataccagtactcttgctgctatgaagcttatgactgctcttgtgaatgttgccttaaac
ctgagtattcaccaggataatacacagaggcagtatgaagctgagagaaacaaaatgatt
ggtaagagagctaatgaaagattggagctgctgcttcaaaaaaggaaagagctgcaagaa
aaccaagatgaaatcgaaaatatgatgaactctatttttaagggcatatttgttcataga
taccgtgatgctattgctgagattagagctgtttgtattgaggaaattggagtgtggatg
aaaatgtacagtgatgccttcctgaatgatagttatttaaaatatgtcggttggacacta
catgacaggcaaggtgaagtgaggttgaagtgtttgaaagctctacagagtctgtacacc
aacagagagttgttccctaaactggagctattcactaacagattcaaggatcgcattgta
tcaatgacacttgataaggaatatgatgttgctgtggaagccattcgattagtcactcta
atacttcatggaagtgaagaagctctgtccaatgaagactgtgagaatgtttatcacttg
gtgtattcagcacaccggccggttgcagtagcagctggagagttccttcacaaaaaactg
tttagcaggcatgacccccaggcagaagaagcattagcaaagaggagaggacggaacagt
ccaaatggaaacctcattaggatgttggttcttttctttcttgaaagtgagttgcatgaa
catgcagcttacttagtggatagtttgtgggagagctctcaagaactgctgaaggactgg
gagtgcatgacagaattgctattggaagaaccagttcaaggagaagaagcaatgtctgac
cgacaagagagtgctctgattgagttgatggtgtgtacaattcgacaagctgctgaagca
catccgccagtgggcagggggactggcaagagagtgttaactgcaaaagaaaggaaaact
cagatagatgacagaaacaaattgactgaacatttcattattgcgcttcctatgttactt
tcaaagtattctgctgatgcagagaaagtagcaaaccttctgcaaatcccccagtatttt
gacctggaaatctacagtacaggcagaatggagaagcatctggatgccttgttaaagcag
attaagtttgttgtggagaagcatgtagaatcagatgttctagaagcctgcagtaaaacc
tatagcatcctgtgcagtgaagaatataccattcaaaatagagttgacatagcccacagc
cagctgattgatgaatttgtggaccgattcaaccattcggtagaggatctgttgcaggag
ggagaagaagcagatgatgatgatatatacaatgtgctttccactttgaagagattaact
tcttttcataatgctcatgatctcacaaagtgggatctgtttagtaactgctacagatta
ctgaggactggaattgaacatggagctatgccagagcagatagttgttcaggcactacag
tgttcccattactctattctctggcagctggtgaaaatcacagaaggctccccctcaaaa
gaggacttgttggtattgaggaaaactgtgaaatcctttctggctgtctgccagcagtgc
ctatcgaatgtcaacactccagtcaaagaacaggctttcatgctgctctgtgatctcttg
atgatttttagccaccagctgatgactggaggtagagagggtcttcaacctttggtgttc
aatccagactctgggctccagtctgaactccttagctttgtgatggaccatgtcttcatt
gaccaagatgatgagaaccagagcatggagggagatgaagaggatgaagctaacaaaata
gaggctttacataaaagaaggaaccttctggcagcctttagcaaacttattatctatgat
atagtagacatgcatgcagcagcagatatcttcaaacactatatgaagtactacaatgac
tatggcgatatcattaaggaaacattgagtaaaacaaggcaaattgataaaatccaatgt
gcgaagacactgattctcagtttgcagcagctgttcaatgagcttgttcaggaacaaggt
cccaatctggacaggacgtctgcccacgtcagtgggattaaggaactggcccgtaggttt
gccctcacctttgggctggatcagatcaagacaagagaggccgtggccacgctgcacaaa
gatggcatagaatttgccttcaaataccagaatcaaaaaggacaagaatatccacctcct
aaccttgctttccttgaagtgcttagtgaattttcttctaaactgttgcgacaggacaag
aagactgttcattcatacttggagaagttcctgacagaacagatgatggaaaggcgggaa
gatgtatggcttccactgatttcctatagaaattcactagttactgggggtgaagatgac
aggatgtctgtgaacagcggaagtagtagcagcaaagcatcttcagtgaggaataagaaa
ggacgacctccacttcacaaaaaaagggtggaggatgagagtctggaaggctcatggcta
aacaggaacgacaccattcaaacaccaggggctctgcaaacaccacagctcacttcaact
gtattgagagagaacactagacaaatgggagagcagattcaagagcatgagtcagaacat
ggatctgaacaagattttttacacaatccccagatgcagatatcttggttgggccagcag
aagctagaagatttaaatcgaaaggacaggacaggaatgaactacatgaaagggagaagt
ggtgtaaggcatgcagtacggggtctaatggaggatgatgctgagcccatctttgaagat
gtaatgatgtcctcacgaggtcagctagaggatatgaatgaggagtttgaagacaccatg
gtcattgatctgccaccttcaagaaaccgacgagaacgagctgaattgaggccggacttc
tttgactctgcagctatcattgaggacgattcaggatttggaatgcctatgttctga
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