Caretta caretta (Loggerhead turtle): 125642275
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Entry
125642275 CDS
T09292
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125642275 (ZC3H12B)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125642275 (ZC3H12B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125642275
NCBI-ProteinID:
XP_048719266
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Position
9:complement(69217794..69316135)
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AA seq
842 aa
AA seq
DB search
MLNVMTAWSMVEKLKMEKRHSKEERNVEQDSGDCSAESEEWTSSESEPEQPCFKNSCSNI
QWREKDISTKPHRQLCRSPCLDRPSFSQSSILQDLKLEECTINLDKEYQAKMDFALKLGY
AGDQIQAVLNKLGADALINDILAELVRLGNKGESEGQGGVSSGSGSLVPRGPCPKEMASP
ELSLEDEVVDNTDNLRPIVIDGSNVAMSHGNKEEFSCRGIQLAVEWFLEKGHKDITVFVP
AWRKEQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGII
VSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPE
HKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTG
SSISKGEISSEVKRIAPKRQSDPSIRSVAVEPEERLSVARKSEANSVPSLVSALSVPTIP
PSKSHAVGALNTRSASSPVPGSSQFTHQKSSLEHMASVQYPPILVTNSHGTSVSYTDQYP
KYESLGDHGYYSMLSDFSNLSISSMRNTEYYGADADQGMYSRNSSPCPDNRLSHTSNDSY
SSYNDLYLGVADTRAEDNVKVHRLSSQNRLQPFSHGYHEALTRVQSYGTEEPKQLPRKQS
VSHLALHVQHPVVGARSSCPGDYPVPQNVHPSATAQPSRALVMTRMDSISDSRLYESNPM
RQRRPPLCREQHASWDPLPCAADTYAYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNP
WIGVCGEPREQHIIPEHQYQTYKNLCNIFPAGIVLSVMEKNPHMTDAQQLAAMIVAKLRT
GR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgtgatgacggcctggtctatggtggagaagttgaaaatggagaagaggcat
tccaaagaagagaggaatgtggaacaggattctggggactgcagtgctgaatctgaggaa
tggacaagctcagaaagtgagcctgaacaaccatgcttcaagaacagctgtagcaatatt
cagtggagggaaaaagacatttctactaaaccacataggcaactctgtcgctctccttgc
ctggatcgtccaagtttctcacagagcagtatccttcaggacttgaaactggaagagtgt
acaataaacttggacaaggaatatcaggctaaaatggattttgctttaaagcttgggtat
gctggagatcagatccaggcagtgctgaacaagttgggagcagatgctctaatcaatgat
attttggcagaactcgtgagacttggcaacaagggtgaatcagagggacaaggcggtgtc
agcagcggtagtggttctctggtgcccaggggtccttgcccaaaggaaatggccagccct
gaactgtcacttgaagatgaagtagtggataacactgacaacttaagaccaattgtcatt
gacggaagtaacgtggctatgagccatgggaataaagaagaattttcctgtcgggggatt
cagctagctgttgagtggtttctggagaaaggacacaaagatatcactgtatttgtacct
gcgtggagaaaagagcagtctcgacctgatgcaccaattacagatcaagaaattttacgt
aaattggagaaagaaaaaattcttgtcttcaccccatctcggcgtgttcagggaagaagg
gtggtctgctatgatgaccggttcatagtaaaactggcttttgactcagatggcatcatt
gtatcaaatgacaattatcgggatcttcagaatgaaaagccagagtggaagaaattcata
gaggaacgcctgctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcct
ttaggacgtcatggtccaagccttgaaaatttcctaagaaaaaggcctgttattcctgaa
cataaaaaacaaccatgcccttacggcaaaaaatgcacttatggacacaaatgtaaatat
taccatccagaacgcgcaaatcagcctcagaggtcagtagcagatgagcttcgaataagt
gccaaattgtctgctgtgaaaactatgagtgagggagctttggccaaatgtggcacagga
tcttccatttccaaaggtgaaatcagttctgaagtgaaacgcattgcccccaaacgccag
tcagacccaagcattagatcagttgctgtggaacctgaggaaaggctatcagtagctcgg
aagtcagaagccaactctgtcccttctcttgtttctgcattaagtgtaccaacaatccct
ccttcaaaaagccatgctgttggtgcattaaatactcgttctgcaagcagccctgtacca
ggttcatcgcaatttactcatcaaaaatcctcactagaacacatggccagtgtgcagtat
cctcccatactggtcaccaatagccatggcacttctgttagctatacagaccagtatccc
aaatacgaatctttaggagaccatggctactattccatgctcagtgatttctccaatttg
agcataagcagtatgcgtaacacagagtattatggagctgatgcagaccaagggatgtac
tctagaaattcaagcccctgtcctgacaatcgcttaagccatacaagtaatgattcttat
tcctcttacaatgatttgtatctgggtgtagcagataccagagcagaagacaatgtgaag
gtccacagactttcatcccaaaatcgtcttcagcctttttcccatggttaccatgaagcc
ttaactagagttcagagttatggaactgaagagcctaaacaactccctcgcaaacagtct
gtttcccatttagcactgcatgtccagcatccagttgttggagcacggtccagttgtcca
ggagactacccagtgcctcagaatgttcatccatcagccactgcacagccaagtcgtgcc
ttggtgatgacaagaatggacagtatttctgactcacggctttatgaaagtaaccctatg
cggcagagaaggccacccctctgtcgagaacagcatgctagttgggatccattaccatgt
gctgctgatacttacgcttaccactcctatccactgagcaacaaccttatgcaaccatgt
tatgaacctgtaatggtaagaagcatgcctgaaaagatggagcaactgtggaggaatccc
tggattggggtatgtggagagccacgggaacagcatattattccagaacatcagtatcag
acatacaagaatctctgcaatattttccctgctggtattgtcctctcggtaatggagaaa
aatccccatatgacagacgcacaacagctggcagctatgattgttgccaaattgagaaca
gggcgttaa
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