Caretta caretta (Loggerhead turtle): 125642287
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Entry
125642287 CDS
T09292
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125642287 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccay03032
]
125642287 (POLA1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125642287 (POLA1)
DNA replication proteins [BR:
ccay03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
125642287 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
125642287
NCBI-ProteinID:
XP_048719303
LinkDB
All DBs
Position
1:142694253..143056872
Genome browser
AA seq
1496 aa
AA seq
DB search
MAESESRRGATSDSGSFAVSRSRREKKSKKGHQEALELLKKAKAGEKVKYEVEEFTSVYE
EVDEEQYSKMVRERQDDDWIVDDDGIGYVEDGREIFDEDLEDDVLGSKKKVGKSDKTSTN
DKKNVKKSVVSKPNTIKTMFMASAGKKNTDKTVDLSKDDLLGDILQDLNAETVQITPPPV
VKLRKKRPVGASLNPFSVQSQAHTVVTPMERKAPTTVRKEVLSPTTSDPKHTTYAAKPAA
VHRENGAEYTIKAAENEELVKAKPEKAIQEDDQGMMDFEDGDFDEPMEADIPETAGALKK
EQKLEEKEAQKVVSVKEDASFLSSFLPDMSCWTRMDKDEIDLVASEVQVDPSCLPLVNGE
DGDQVFRFYWLDAYEDQYSQPGVVFLFGKVWIESAETYVSCCVTVKNIERTIYLLPREMQ
MDLTSGKEMENPVTMMNVYQEFNDQIAVKYKIMKFRSKKVEKNYAFEIPDVPVKSDYLEV
RYLAEFPRLPQDLKGETFSHVFGTNTSSLEVLLMSRKIKGPSWLEIKNPQPLSHSVSWCK
VEATALKPDLVNVVKDLPPPPLVIMSLSMRTIQNVKTHQHEVMAVAALVHQRFCLDKAPP
QPPFQTHFCVISKPNDCIFPYDFKEIIKSKNANVEIAATERTLLGFFLAKIHKIDPDIIV
GHNIYGFDLEVLLQRINVCKVPHWSKIGRLRRSIMPKLGGRGGFAERNAACGRMICDVEI
SAKELIRCKSYHLSELVHQILKTERVTIPPEEIRNMYSDSSHLLYMLENTWTDARFILQI
MCELNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFYERDYIVPDKQVFKKPQQK
LVDEDEDVEDQNKSKIGRKKAAYAGGLVLDPKVGFYDTFILLLDFNSLYPSIIQEFNICF
TTVQRESSDAQKRAEDGMQEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQTDLNP
DLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNL
EVIYGDTDSIMINTNSTNLEEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYA
ALTVEPTGDGKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQSRDTIVENIQRRL
IEIGENVINGRVPISQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVS
YVICQDGSNLSASQRAYAPEQLQKQENLTVDTQYYLSQQIHPVVARICEPIDGIDSVLIA
TWLGLDPSQFKVHHHYHKDEENDALLGGPAQLTDEEKYRDCERFKFSCPRCGTENIYDNV
FDGSGKLMEPSLQQCSKKECDESPFHCVIQMNNKLLLDIRRYLKSYYNSWLICEEPTCQN
RTRRLPLSFSQNGALCQACKKAILRPEYSDKALYTQLCFYRYIFDVDYAKEKVTTDQEKD
IMKRKLTINETEVYRKLKNTVDKFLSMSGYSEVNLSKLFQTFSIVKSVGDPSNERQ
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcgagagccggcgcggcgctacatcagactctggaagttttgcagtgtca
cgttctcggcgtgagaaaaaatctaaaaaaggacaccaagaagctctagaactcttgaaa
aaggccaaggcgggtgaaaaagtaaaatatgaggttgaggagttcacaagtgtttatgaa
gaagttgatgaagaacaatactccaagatggtcagggaacgccaggatgacgattggatt
gtagatgatgatgggataggttatgtagaagatggaagggaaatctttgatgaagatcta
gaagatgatgtccttggttccaagaagaaagtaggaaaaagtgacaaaacatccacaaat
gacaaaaagaatgtgaagaagtctgtggtgtcaaagccaaacactatcaagactatgttt
atggctagtgctgggaagaaaaacacagataaaactgtagacttgtccaaggatgattta
ctcggggatattcttcaagatctgaatgctgagaccgttcagataactccacctccagtt
gtaaagctaagaaagaaaagacctgttggagcttcactgaatcctttctctgtacagtca
caggcccatacggtagtaacccctatggaaaggaaagctcccactactgtcagaaaggaa
gttctttctccaactacctctgatcctaagcatacgacttatgcagcaaaacctgctgca
gtccatagagagaatggtgctgagtatacaataaaagctgcggaaaatgaagagctggtg
aaggcaaaaccagagaaagctattcaagaagatgatcagggcatgatggattttgaggat
ggggattttgatgaaccgatggaagcggatataccagagactgccggggccctgaagaaa
gaacagaaactagaagagaaagaggcacagaaagtggtttctgtgaaggaagatgcatcc
tttttaagttcttttctccccgatatgtcctgttggaccagaatggataaggatgaaatt
gatttagttgcctcagaagttcaagtggaccccagttgcctgccactagtgaacggggaa
gatggtgatcaagtctttaggttttattggctggatgcttacgaagatcagtatagtcaa
ccaggtgtggtatttctgtttggtaaagtgtggattgaatcagcagagacctatgtcagc
tgttgtgtgacagtgaaaaatattgagagaactatctatctactgccacgtgagatgcaa
atggacctaacttctggtaaagagatggagaatcctgtgactatgatgaatgtctaccaa
gaatttaatgaccagattgctgtaaaatacaagatcatgaagttcagatccaagaaagtt
gaaaagaattatgcttttgagatcccggatgttccagtgaagtctgactacctagaagtt
aggtacctggctgaattcccccggcttcctcaagatctgaaaggagagacgttttctcat
gtatttggaactaacacttctagcctggaagttctcttgatgagtaggaagatcaaagga
ccaagctggctggaaataaaaaatccacagcccttgagtcattcagtcagttggtgtaag
gtggaggcaacggccctgaaacctgacttggtgaatgtagttaaagatcttcctcctcct
cctcttgtgatcatgtctctcagcatgaggacaattcagaatgtgaagactcaccagcat
gaggtcatggctgttgcagctctagtccatcaaagattttgtttggataaagcacctcct
cagcctcctttccagacacacttctgtgttatttccaaaccaaacgattgtattttccct
tatgacttcaaagaaatcattaaaagcaagaacgctaacgtagagattgctgcaacggag
agaacgttgctgggttttttccttgcgaagattcacaaaattgacccagatattattgtg
ggtcataatatttatggctttgatctggaagtgctgctgcagagaattaatgtgtgcaaa
gtccctcactggtccaagataggtcgactgaggaggtccatcatgccaaagcttgggggt
cgaggtggctttgctgaaaggaatgcagcctgtggtcggatgatctgtgatgtggaaatt
tcagcaaaagaattaattcgttgcaagagctaccatttatctgaattggtccatcagatt
ttgaaaaccgagagggtaacaattccaccagaagagataagaaatatgtacagtgattcg
tctcacttactgtacatgctggagaacacctggacagatgccagattcattctgcagatc
atgtgtgagctgaatgttcttccgctagccctgcagattacaaacatctctgggaatgtt
atgtcaaggacaatgatgggtgggcgatcagagcgtaatgagttcctgctgcttcatgct
ttttatgagagagactatattgtgcctgacaagcaagtttttaaaaagcctcagcagaag
ctggtggatgaagatgaagatgttgaagatcagaataaatcaaagatagggagaaagaag
gcagcatatgctgggggtctagtgttggatccaaaagtgggtttttatgacacatttatt
ttgcttctggacttcaacagcttgtacccttcaattatccaggagttcaacatatgtttt
accacagtgcagagagagtcatcagatgcacagaaaagggcagaggatggaatgcaagaa
gaaattccagaactaccagatccatctctagaaatgggaattttgcctaaagagatcagg
aagctggtggagagaaggagacaagtcaagcaattgatgaaacagactgatttaaatcct
gacctctatttacagtatgatatcaggcagaaggctttgaagcttacagctaatagcatg
tacggctgtctggggttttcctacagtagattctatgccaagcctttggcagctttggtg
acacacaaagggagagagattttgatgcatactaaggagatggtgcagaagatgaacctt
gaagtgatttatggagatacagattccattatgataaatacaaatagcaccaacctggag
gaggttttcaagctggggaacaagattaaaagtgaagtgaacaagctgtacaaattgttg
gagattgatattgatggggtcttcaagtccttgctactgttaaagaagaagaaatatgct
gctctgacggtggagccaacaggagatgggaaatatgttactaaacaggaattgaaagga
ttggacatagtccgaagagactggtgtgatcttgcaaaagaaactggaaactatgtaatt
ggtcagattctttctgaccagtcccgagacacaatcgtggaaaacattcaaagacgacta
atagaaattggagaaaatgtgataaatggcagagtcccaataagccaatttgaaatcaac
aaggcattgacaaaggatcctcaggattatcctgacaaaaaaagcttgccacatgtgcat
gttgccatgtggataaactctcaaggaggccgaaaagtgaaagcaggagatactgtgtcg
tatgtgatctgtcaggatgggtcaaatctgagtgccagccagagagcatatgctccagaa
cagctgcaaaaacaagaaaatcttactgttgatactcagtactatctgtcacaacagatt
cacccagtagtggctcgaatctgtgagcccatagatggaattgactctgttctcattgca
acatggttaggactggatccatcccaattcaaagtccatcaccattaccataaagatgag
gagaacgatgccttgcttggtggcccagctcagctcactgatgaggagaaatatagggac
tgtgaaagattcaagttttcctgtccgagatgtggaacagagaacatttatgacaatgtc
tttgatggttcgggaaagcttatggaacccagcttgcaacagtgcagtaagaaagaatgt
gatgagtcccctttccactgtgtgattcaaatgaacaacaaactactcttggatattaga
cgttacctaaaaagctactataatagttggttaatatgtgaggagccgacttgccagaat
cgaacccgtcgccttcccctcagtttctcccagaatggtgctttatgtcaggcctgtaag
aaggctatcctcagacctgaatattctgacaaggccctgtacacccagctgtgcttttac
cggtatatttttgatgtggactatgcaaaggagaaagttactactgatcaagagaaagac
atcatgaagaggaagctgaccataaatgagacagaagtttacagaaagttgaagaacaca
gtagacaaatttctgtccatgagtggctattctgaagtaaacctcagcaaactctttcag
accttcagtatagtaaaatctgtgggagatcccagtaatgaaagacaatga
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