Caretta caretta (Loggerhead turtle): 125642355
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Entry
125642355 CDS
T09292
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04136
Autophagy - other
ccay04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125642355 (ATG4B)
04136 Autophagy - other
125642355 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125642355 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125642355 (ATG4B)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125642355 (ATG4B)
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
125642355 (ATG4B)
Membrane trafficking [BR:
ccay04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125642355 (ATG4B)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125642355 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
125642355
NCBI-ProteinID:
XP_048719523
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All DBs
Position
9:complement(54743239..54792848)
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AA seq
443 aa
AA seq
DB search
MAAPLWMRKPCGAAERGELPSRPIPTEKRCEPLSDWTRWAPRQERTGYAAACVATLTYDT
LRFEYEDFPETKDPVWILGRTYSVFTEKEEILLDVTSRFWFTYRKNFPAIGGTGPTSDTG
WGCMLRCGQMIFAQALVCRHLGRDWRWVKGKRQTDNYFNILNAFIDKKDSYYSVHQIAQM
GVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRRLCKSNFLCAG
AAAFPAAESDLFYNGYPDGAEVTDRLSLWKPLVLLIPLRLGLTDINEAYIETLKHCFMMP
QSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDNSCIPDESFHCQHPPCRMSI
AELDPSIAVGFFCNTEEDFNDWCQEIKKLSLLKGVLPMFELVEHQPSHFSSPDVLNLTPD
SSDADRLERFFDSEDEDFEILSL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctctatggatgaggaagccgtgcggcgcagctgaacgcggcgagctcccc
tctcgacctatcccgactgagaagcgctgtgagccgctctctgattggacgcgctgggct
cctcgtcaggagcggacgggctacgctgcggcctgtgtggctactctgacctatgatact
ctcaggtttgagtatgaagacttccctgagaccaaagaccctgtttggatactggggaga
acatacagtgtgttcacagagaaggaggagatcctgttggatgtgacctctcggttttgg
ttcacatacagaaagaactttcctgccattggaggaacaggtcccacatctgataccggc
tggggctgcatgttgaggtgtggtcagatgatcttcgcacaggcattggtctgccggcac
ttaggcagagattggaggtgggtgaaagggaagaggcagacggataattacttcaacata
cttaatgccttcattgacaaaaaagacagctactactccgtccaccagatagcccagatg
ggagttggagagggcaaatcgataggccagtggtacggaccaaacacagttgcacaagtg
ctcaaaaaacttgccacttttgatacatggagctcattggcagtgcacatagccatggac
aacactgtagtgatggaagagatcagaaggttatgcaagtccaatttcttgtgtgctggt
gctgcagcattccccgctgcagagtcagacctgttctataatgggtacccggatggagca
gaggttacagataggttgtcgctatggaaaccattggtgctgctgatacctcttcgcctt
gggctcacggatatcaatgaagcttatattgaaacactaaagcactgtttcatgatgcct
cagtccctgggagtgattggagggaaacccaacagtgctcattacttcattggctatgta
ggtgaggagctaatttacttggacccccacactacacagcctgcagtggaacccagtgat
aacagctgtatccctgatgagagcttccactgccagcacccgccctgccgaatgagcatt
gctgaactcgacccatccatcgcagtgggctttttctgcaacacagaggaagactttaat
gactggtgccaggaaatcaaaaagctgtccctgctaaaaggagttctgccaatgtttgaa
ctggtagaacatcagccttcacacttctccagccctgatgttctgaatctcacaccagac
tcttctgatgcagacaggttggaaagattctttgactcagaggatgaagactttgaaatt
ttatctctttga
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