Caretta caretta (Loggerhead turtle): 125642360
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Entry
125642360 CDS
T09292
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125642360 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125642360 (DHX36)
03012 Translation factors [BR:
ccay03012
]
125642360 (DHX36)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125642360 (DHX36)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125642360 (DHX36)
Translation factors [BR:
ccay03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125642360 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
ATPase
nSTAND3
NPHP3_N
NACHT
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125642360
NCBI-ProteinID:
XP_048719542
LinkDB
All DBs
Position
9:25587701..25629512
Genome browser
AA seq
976 aa
AA seq
DB search
MSFEHRRDWSRGGGGGPRPSSSSAGGPEGRGGRGRHPSHLKGRDIGLWYARKQGQKSKEP
DRQQRAVVRMDERREEQIVQLLNTVQTRNEKEQESVSWWSGEEEGPEVPVEKPTLAKTSV
KQRPILEKTFVDRDSEYLFQENEPDIDLNEKFREELRKKKFDPRYIEMQRFREKLPSYGI
RRELITMINNNQVTVISGETGCGKTTQVTQFILDDCIERGKGSACRIVCTQPRRISAISV
AERVAAERAEVCGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKQLSSVSHVI
LDEIHERNLQSDVLMTVIKDLLNVRPDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFP
VVEYLLEDTIEKLRYTPKDTDCRPRLKKGFMQGHISRPEKEEKEEIYRERWPDYLRQLRG
RYSASTIDALEMMDDDKIDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV
MFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKI
KETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEIL
RTPLEELCLQIKILRLGGIAYFLSRLMDPPSREAVMLSINHLMELNALDRQEELTPLGVH
LARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNT
KSDHLTVVNAFVGWEEVRRRGFRSEKDYCWEYFLSSNTLQMLLNMKGQFAEHLLAAGFVS
SKNPRDPKSNTNSDNEKLLKAVICAGLYPKVAKIRKSFSKKRKMVKVCTKTDGTVNIHPK
SVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDE
WIVFESPARIGNLVKDLRRELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLITTQEN
ESPRNYAPRFQNERYS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgagcaccgcagggactggagccgcggaggaggagggggcccccggccttcc
tcctcctccgcggggggacccgaaggccgcgggggccggggccggcatcccagccacctc
aagggccgcgacatcgggctgtggtacgcgcggaagcagggccagaaaagcaaagagcct
gacaggcagcagagagctgtggtgcgtatggatgaacgcagggaagaacagattgttcag
ttgctgaatactgtccagactagaaatgaaaaagaacaagaatctgtgtcatggtggtcc
ggtgaggaagaaggtccagaggtacctgtagagaaaccaaccttggcgaagacttctgta
aagcagagaccaattttggagaaaacattcgtagatcgagattcagaatatctctttcaa
gaaaatgagccagatattgatttgaatgagaaatttagagaagagttaagaaagaagaaa
tttgatcctagatacattgaaatgcagagattccgagagaaacttccttcatatgggata
agaagggaactgataactatgatcaataataatcaggtgactgtgataagtggtgagact
ggttgtggaaagacgacacaagttactcagttcattctggatgactgtatagagagaggg
aaaggatctgcttgcaggattgtatgtacccaacctaggaggatcagtgctatctcagtg
gcagagagagttgcagctgaaagggcagaagtgtgtggtaatggcaagagtacaggatac
caaattcgtctccagagtcggttaccaaggaaacaaggttccattttgtattgtacaaca
ggaatcgtccttcagtggctccaatcagacaagcagttgtccagtgttagtcatgttatt
cttgatgaaatccatgaaagaaatcttcaatcagatgtcttaatgactgttattaaagat
cttctaaatgttcgaccagacctgaaagtaatactgatgagtgctactttgaatgctgag
aaattttcagaatattttgacaattgtcccatgatccatatacctggattcaccttccct
gttgtggaatatcttttggaagacacaattgaaaagttaagatatactccaaaagataca
gattgcagaccacggttgaagaagggctttatgcaaggacacataagcagaccagaaaag
gaagagaaagaagaaatctatagagaacgatggccagattatctaaggcagctgcgagga
aggtattcagcaagtactatagatgcattggaaatgatggatgatgacaagattgatctt
gaccttatagctgcacttatcagacacattgtcctagaggaagaggatggtgcaatactg
gtgtttctcccaggctgggacaatattagcactttacatgacctcttgatgtcacaagtc
atgtttaagtcagatagattcattattatacctctgcattcactgatgcctactgttaat
cagacacaggtttttaaaaagacccctcctggagtacggaaaattgtaattgctaccaac
attgcagagactagcattaccattgatgatgtggtgtatgtcatagatggaggaaaaata
aaagaaactcactttgatacacagaacaacattagcacaatggcagcagagtgggttagt
aaagctaatgccaaacaaaggaaaggtcgagcaggaagagtccagccgggtcactgttat
catctatacaatggtctacgtgccagcctactggatgattatcaattaccggaaatccta
aggacacctttggaagaactttgtttacaaatcaagattctaaggcttggtggaattgct
tattttctgagtaggctaatggatccaccatctcgtgaagctgtgatgttgtccataaat
catctaatggaactgaatgctttggatagacaagaagaactgactccattaggtgtccac
ttggcacgattgccagttgagccacatattggaaaaatgatcctctttggagctttattc
tgttgcttagatccagtactcacaattgcagccagcctcagcttcaaggacccctttgtg
attccactgggcaaagagaaagtagcagatgcaagaagaaaagaattatcaaagaatact
aaaagtgaccatctaactgttgtgaatgcttttgtgggctgggaagaggtccggcgacgt
ggtttcagaagtgaaaaggattattgctgggaatattttctctcttcaaatacacttcag
atgctgcttaacatgaaaggacagtttgctgaacatctccttgcagctgggtttgtgagt
agtaaaaacccccgagatcccaaatctaataccaactcagataatgagaagttactcaaa
gcagtcatctgtgctggtttatatccaaaagttgcaaagatccgtaaaagctttagcaaa
aagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaacattcatcctaaa
tctgttaacgtggaagagacagaattccattataactggcttgtgtatcacttaaagatg
agaactagcagcatttacctgtatgattgtacagaggtctctccatactgtcttttgttc
ttcggcggagatatttccatccagaaggataaagatcaggatactattgcagtggatgaa
tggattgtctttgagtctccagctaggataggaaatctagttaaggatttaagaagagaa
ctggatgaccttctacaagaaaaaattgaaaacccacaccctgtggactggaatgacact
aaatccagggacactgcagtgctgacagccattatagacctaatcacaacacaggagaat
gaaagtcccagaaactatgcccctcgatttcagaatgaacgttacagttga
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