Caretta caretta (Loggerhead turtle): 125642382
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Entry
125642382 CDS
T09292
Symbol
BRCC3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03440
Homologous recombination
ccay04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125642382 (BRCC3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125642382 (BRCC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125642382 (BRCC3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125642382 (BRCC3)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125642382 (BRCC3)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125642382 (BRCC3)
Peptidases and inhibitors [BR:
ccay01002
]
Metallo peptidases
Family M67
125642382 (BRCC3)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125642382 (BRCC3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
125642382 (BRCC3)
BRISC complex
125642382 (BRCC3)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125642382 (BRCC3)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125642382 (BRCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
DUF6262
Motif
Other DBs
NCBI-GeneID:
125642382
NCBI-ProteinID:
XP_048719592
LinkDB
All DBs
Position
9:complement(99927869..99942028)
Genome browser
AA seq
277 aa
AA seq
DB search
MAVQAVHLEADAFLVCLNHALSTEKEEVMGLCIGEVPAGPRAGGLPEPGRWVDTSRIVHI
HSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEITGRSMRVVGWYHSHPHITVWPSHV
DVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVV
PHDTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAI
SGPLLQWLEDRLEQNKQRVQELQREKEELMKELAALE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggctgtgcacctagaggcggacgccttcctggtctgcctcaaccacgcg
ctgagcaccgagaaggaggaggtcatggggctgtgcatcggggaggtaccggctgggccg
cgggcaggcgggctcccagagccggggcgctgggttgacaccagcagaattgttcatatt
cattctgtgatcatcctgcgacgttcagataagaggaaggatcgagtcgagatttctccg
gagcagctttcagctgcttctactgaagcagagagattggctgagattacaggacgttcc
atgagggttgtgggctggtatcattctcatccacacataactgtctggccgtctcatgtg
gatgttcgcactcaagccatgtatcagatgatggaccagggctttgtggggctcatcttc
tcctgtttcattgaggacaagaacacaaagacaggccggatactctacacctgtttccag
tcaattcaggctcagaagagctcagagtatgagaggattgaaattcctattcatgttgtt
ccccatgacaccattggcaaagtgtgcctggaatcggcggtggagctgcccaagatcttg
tgccaggaggagcaagatgcatacaggagaattcacagcctcacccatctagactctgta
accaagattcacaatggctcagtgttcaccaagaatctctgcagccaaatgtctgctatc
agtggtcccctcctacagtggctggaggacagactggagcagaacaaacagcgggtgcag
gaactgcagcgagagaaagaagagctcatgaaagaactagctgccctggagtga
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