Caretta caretta (Loggerhead turtle): 125642678
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Entry
125642678 CDS
T09292
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125642678 (PCDH19)
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125642678 (PCDH19)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
125642678
NCBI-ProteinID:
XP_048720312
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Position
9:complement(92799755..92908686)
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AA seq
1094 aa
AA seq
DB search
MDILPVLLALLWSGAGALINLKYSVDEEQRAGTVIANIGKDAREAGFVLDPRQPAAFRVV
SNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLND
NAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYELTPNDLFGLETKTRGDG
SRFAELVVGRSLDRETQSHYSYRLTALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYA
VSVPENAPPGTPLLRLNASDPDEGTNGQVLYSFHSYVSERARQLFHLDPQSGLLSVSGPV
DYEEGHSYELDVQAKDLGPNSIPAHCKVTVSVQDANDNPPLINLLSVNSELVEVSESAPP
GYVIALVRVSDRDSGANGRVQCKLLGSVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQ
ARDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGL
NGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQ
SNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVIKADDYDEGENGRLS
YEMADGDRGFFEIDQLNGEIRTTRAFGENAKTTYELIVVAHDHGKTSLSASALILIYLSP
ALDAQESIGSVNLSLIFIVALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGH
QKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSEST
FLNVENQNTRNTGSNHVYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIK
SSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVTSMGSQMPEQDQ
TDGFHCREECRILGHSDRCWMPRNSVTSRAKSPEHGRNVMALSIEATTVDTESYEDCSTK
RTFATFGKDGSEPLADERIVNLKGKRTVDLPICSPKVNGAVREAGNGCEAVSPITSPLHL
KSPLSSKPSVSYNIMHCPVNRDLEQFVNNGPSRPTEAEPRGADSENIMHEINPLLQECRE
KDSPGVKRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggatattctccccgtcctgctcgccttgctgtggtccggggcaggagccctgatcaac
ctgaagtactcggtggacgaggagcagcgcgccggcacggtgatcgcgaacatcggcaag
gacgcccgggaggccggcttcgtgctggacccccgccagcccgccgccttccgggtggtc
tccaactcggccccgcacctggtggacatcagcccgggctcgggcttgctggtgaccaag
cagaagatcgaccgggacctgctgtgccgccagagccccaagtgcgtgatctcgctggag
gtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctgaacgac
aacgcgcccagcttccccaccgaccagatcgagctggagatctcggagacggccagcccg
ggcacgcgggtgccgctggagagcgcctacgacccggactcgggcagcttcggggtgcag
agctacgagctcacccccaacgacctcttcgggctggagaccaagacgcgcggcgacggc
tcccgcttcgccgagctggtggtggggcgcagcctggaccgcgagacgcagtcccactac
agctaccggctcacggcgctggacggcggcgacccgcccaacttcggcacggtggagctc
agcatccgggtcatcgactccaacgacaacaacccgctcttcgaggagccggcctacgcc
gtcagcgtgcccgagaacgcgccgcccggcacgcccctgctccgcctcaacgcctccgac
cccgacgagggcaccaacgggcaggtgctctactccttccacagctacgtgtccgagcgg
gcccgccagctcttccacctggacccgcagagcggcctgctcagcgtcagcggccccgtg
gactacgaggagggccacagctacgagctggacgtgcaggccaaggacctggggcccaac
tccatcccggcccactgcaaggtgacggtcagcgtgcaggacgccaacgacaacccgccc
ctcatcaacctgctctcggtcaacagcgagctggtggaggtgagcgagagcgcgccgccc
ggctacgtcatcgccctggtgcgggtctccgaccgcgactccggggccaacgggcgggtg
caatgcaagctgctgggcagcgtgcccttccgcctgcaggagtacgagagcttctccacc
atcctggtggatgggcggctggaccgggagcagagggaccagtacaacctcaccatccag
gcccgggacaacggggtgccctctctgcaggccaccaagtccttcaccgtcaagatcacc
gacgagaacgacaaccatccccacttctccaagccctactaccaggtcatcgtgcaggag
aacaacacccctggggcctacctcctctccgtctccgccagggaccctgacctgggccta
aatggcagcgtctcctatcagatcgtgccctcccaagtccgggacatgcccgtcttcacc
tacgtctccatcaaccccaactctggggacatctatgccttgaggtccttcaatcacgag
cagaccaaggctttcgagttcaaggtcttggccaaagatgggggcaacccgtccctgcag
agcaatgccaccgtcagagtgatcgtcctggatgtcaacgacaacacccctgtgataact
gccccacctctggtcaatgggactgcagaagtgtacattcctaggaacgctggggttggt
tacttagtgacagtgatcaaggcagatgactatgatgagggggagaatggaagactatcc
tatgaaatggcagatggggatagagggttttttgaaatagatcagctcaatggagagata
aggaccaccagagcattcggggagaatgcaaagactacttacgagctgattgtggtggcg
catgatcatggaaaaacatcgctctcagcttctgccttgattttgatatacctatctcca
gctctcgatgcccaggaatccataggatctgttaacttgtcactgattttcattgttgcc
ctgggttctattgctgccattctttttgtcaccatgatctttgtggcagtcaagtgtaaa
agggataacaaggaaataaggacctacaactgcagaattgcagagtactcttatgggcat
caaaagaaatcaagcaagaagaaaaaaatcagcaagaatgatatccggctggtaccacgg
gatgtagaggagacagataaaatgaatgtggtgagctgctcctcccttacttcatctctc
aactattttgactatcatcagcagaccttgccactgggctgccgcagatctgaaagtacc
ttcctcaatgtggagaatcagaatactagaaacacaggctccaaccacgtttatcatcac
accttcaccgggcagagtccccagcaaccggatctgatcatcaatggaatgccattgcca
gagactgaaaactactcttttgattccaactatgtgaacagcagagcccatttaataaag
agcagttcaactttcaaggacttagaggggaatagtctcaaggatagtgggcatgaggag
agtgaccagactgacagtgaacatgatgtccaacggggcctgtactgtgacactgccgtc
aacgatgtgctgaacaccagtgttacttccatggggtctcagatgcctgaacaagatcaa
actgatggatttcattgtagggaagagtgtcggatccttggtcactcagatagatgctgg
atgccccggaactctgtcaccagtcgtgcaaaatcccccgagcatggaaggaatgtcatg
gcactctctatagaagctaccactgtggatacagagtcttatgaagactgtagtacaaaa
agaacttttgcaacatttggcaaagatgggagtgaacccctggccgacgagcgtatcgtc
aacctgaaaggcaaaagaacagtggatctgcccatctgcagcccaaaggtaaatggtgca
gtccgtgaagcggggaacggctgcgaagctgtgagccctatcacgtcaccccttcatctg
aagagtcccctgtctagcaaaccttcagtctcatacaacataatgcactgcccggtaaat
cgcgacctggagcaatttgtaaacaatggcccttctcggcccaccgaagcagagcctaga
ggggcggacagtgaaaatataatgcatgaaattaacccacttctgcaagaatgtagagaa
aaagactcaccaggagtgaagagactaaaagacatagtgctctaa
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