Caretta caretta (Loggerhead turtle): 125642748
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Entry
125642748 CDS
T09292
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125642748 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125642748 (USP9X)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125642748 (USP9X)
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125642748 (USP9X)
Ubiquitin system [BR:
ccay04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125642748 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
EcoEI_R_C
Vps23_core
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
125642748
NCBI-ProteinID:
XP_048720476
LinkDB
All DBs
Position
1:152547736..152753940
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILNRIKANSAHTKVELFIGGELIDPADDRKLIGQLNLKDKTL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEIESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGFGHVRAVAEACQPVVEGTSPVSPINQATHDQAVVLQT
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPSKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPVLSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQLIQNEQPENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTMDKDNELIKYISELAMTTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLSNPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacccgtggctctccagtaggagggaatgatagccagggccaggctcct
gatggacagtctcagccgcccctccaacagaatcagacttcttcacctgattcttccaat
gagaattccccagctacccctcctgatgagcagggtcaaggggatgccccaccccaactt
gaagatgaggagcccgcatttccacacacagatctggcaaagttggatgacatgatcaac
agacctcgatgggttgttcctgtgttgccgaaaggggagttagaagttcttctagaagct
gctattgatcttagtaaaaaaggccttgatgttaaaagtgaagcatgtcagcgatttttt
cgagatgggctaacaatatctttcacaaaaatccttacagatgaggcggtgagcggctgg
aagtttgagattcataggtgtattattaacaacactcaccgtctagtagagctatgtgtg
gccaagttgtcccaagattggtttcctcttcttgaacttcttgcaatggccttaaatcca
cattgcaaatttcatctctacaatggtacacgtccctctgaaacagttcctgcgggagtt
cagctggctgaagatgaactttacgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatctcatcaacaagtttggcacattaaatggatttcagatcctgcatgatcgt
tttatgagtggttcagcattgaatgttcagataattgcagctctcatcaaaccatttgga
caatgctacgagtttctaacgctacacacagtcaagaaatacttccttccaattatagaa
atggttccacagtttttagaaaacttaactgatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttccaga
gtcccaggacaagaagaaacagtaaaaaacttagaaatatttaggttaaaaatgatactt
agattattgcaaatttcctctttcaatggtaaaatgaatgcactaaacgaagttaacaag
gtgatatctagtgtgtcatattatacgcatcggcatggtaatcctgaagaggaagagtgg
cttacagcagagagaatggcagaatggatccagcaaaataatattttatcaatcgtatta
cgagatagtcttcatcagcctcaatacgtagaaaagttagagaagattcttcgttttgtc
atcaaagaaaaagccctcactttggaagatcttgacaacatttgggcagctcaggctgga
aaacatgaagccattgttaagaatgtacatgatcttcttgcaaagttggcttgggatttc
tctcctgaacaacttgatcacctgtttgattgctttaaggcaagctggacaaatgcaagc
aaaaaacaacgggaaaaactacttgagttaatccgtcgtcttgcagaggatgataaagat
ggtgtgatggcacacaaagtattgaaccttctgtggaatttggcacatagtgatgatgta
cctgttgatatcatggaccaggctcttagtgcccacattaaaattttagattacagctgt
tcacaggatcgggatactcaaaagatccagtggatagatcgttttatagaagagcttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgtagtttgttt
ggtgaagcaccacagaacttgagccagactcagcgaagtccccatgtattttaccgccat
gacttaatcaatcaacttcagcacaatcacgccctagttactttggtggcagaaaatctg
tccgcgtatatggaaagcatgagacagtatgctaaagagcatggagagtatgatccacaa
actgtaagaccaggaagtagatacagtcatgtgcaagaagtacaggagcgacttaacttc
ctacgatttttattgaaggatggtcagctgtggctctgcgcccctcaggcgaagcaaata
tggaagtgtttagccgaaaatgcagtctatctttgtgatcgtgaagcctgttttaagtgg
tattccaaactaatgggcgatgaaccagatttagaccctgacattaataaagacttcttt
gaaaataatgtgcttcagttggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaagggaagctagtagcgaaaagacgagct
tatatgatggatgacttggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacattgccagcagagcaatagatctgcttaaagagatctatactaatctt
ggtccaaggttacaagttaatcaggtagttatccatgaagacttcattcaatcctgcttt
gatcgtttgaaggcctcctatgatacactgtgtgttttggatggagataaagacagtatt
aattgtgcaaggcaagaagcaatacgaatggtgcgagtattgactgttttaagggagtat
ataaatgaatgtgacagtgattaccatgaagagagaacaattcttcctatgtcaagagct
tttcgtggtaaacatatcacgctggtggttcgttttccaaaccaaggtcggcaggtagaa
gacttggatatttggtctcacaccaatgacacaattggttctgtacggcgttgtattctg
aatcgtattaaagccaacagtgcacatacaaaagtagaactgttcattggtggtgagctg
atagatcccgcagatgataggaagttaattggacaattaaatcttaaagataaaacgcta
attacagccaagcttacgcaaataagttccaatatgccttcaagccctgatagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactatagtgacggtccaaaccca
gaaattgaaagctgtttgcctggagtgatcatgtcactgcatcctagatacatctcgttt
ctttggcaagttgcagacttaggcagtagcctaaatatgccacctcttagagatggagca
cgtgtccttatgaaacttatgccaccagataacactacagtagagaaactaagagctatt
tgcttagaccatgcaaaacttggtgaaagcagccttagtccatcccttgactctctcttc
tttggcccttctgcctcacaagtgctatatctaacagaggtagtctatgccttgttaatg
cctgccagtgcacctctgggggaagatgccagtgacttccaatataacttcttaaaaagt
ggtggtttgcctcttgtattgagcatgttgactagaaataatttcctgccaaacgcagat
atggaaactagaaggggagcctaccttaatgctctaaaaatagccaaattgttgcttaca
gcaattggctttggccatgttcgagctgtggcagaagcttgtcagccagttgtagagggc
acaagtccagtctcaccgataaaccaggctacccatgaccaggcagtggtgctgcaaact
gccctacagaacattcccaatccaacttcagagtgcatgctacgaaatgtagcaatacgt
cttgcccagcaaatatctgatgaggcttcaaaatacatccctgatatctgtgttattaga
gcagtacaaaaaattgtctgggcatcagggtgtgggtcagtacagctggtgttcagctca
aatgaggaaattagtaaaatttatgaaaagacaaatgcaggcaatgagccagacatggaa
gatgaacaagtttgctgtgaagctttggaggtgatgaccttgtgttttgctttgattcca
acagcattggatgcacttagtaaagaaaaggcatggcagacatttatcattgacttgcta
ttgcactgtcacagcaaaaccgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgtatgggacagagacctctgcttttcttcattacactgctgtttactgtg
ttagggagtactgcaagagagagagctaagcattcaggagactacttcaccttattaaga
caccttcttaactacgcttacaacagtaatattaatgtgcccaatgctgaagttcttctt
aataatgaaatagactggcttaaaaggattagggatgaagtgaaaagaacaggagaaaca
ggtgttgaagagacaatcttggaaggccaccttggagtaacaaaagagttgttggcattc
caaactcctgaaaagaaatatcatattggttgtgaaaagggaggtgctaatctcattaaa
gaattgatagatgacttcatctttccagcttccaatgtatatttacaatacatgagaaat
ggagaactgcctgctgagcaagccataccagtctgtagttcaccagctaccattaatgct
ggttttgagttgctagttgcactagcagtggggtgtgtccgaaacctcaaacaaatagta
gacaccttgactgaaatgtattacataggtacagcaataactacttgtgaagcacttaca
gaatgggaatatttgccacctgttgggcctcggccatcaaagggatttgtaggattaaaa
aatgctggtgctacttgttacatgaattctgttattcagcagctatacatgattccagct
atcagaaatggtattcttgcaattgaaggcacaggcagtgatgtagacgatgatatgtct
ggggatgagaagcaggacaatgagagcaatgtagatcctcgggatgatgtgtttggttat
ccacatcaatatgaagataaaccagtgttaagtaaaacagaagatagaaaagaatacaat
attggagttctgagacatctccaagtcatctttggtcatttagcagcttccagactacaa
tactacgtaccaagagggttttggaaacaattcagactttggggtgaacctgttaatctc
cgtgaacaacatgatgctttagaattttttaattccttggtggacagtctagatgaagct
ttaaaagctttggggcatccagccatgttaagtaaggttttgggagggtccttcgctgat
cagaagatttgtcaaggatgcccacataggtacgagtgcgaggaatcctttacaactctg
aatgtagatattagaaatcaccaaaacctgcttgattctttggaacaatatgtcaaagga
gacttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttgataca
gtgaaacgcttgttgattaagaagttgcctccagttcttgctatccagttaaaacgattt
gactatgactgggaaagggaatgtgcaatcaagttcaatgattattttgaatttccacgg
gagctggacatggagccttatacagtggcaggtgtagctaaattggaaggagatgatgta
aatcctgaaaatcagttgatacaaaatgaacagccggaaaatgagcactctgggagcact
aaatacaggctagttggtgtattagtacacagtggtcaggccagtggtggacattattac
tcttacattatccagagaaatggtggagatggtgagaaaaatcgatggtataaatttgat
gatggagatgtaacagagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgtttt
ggtggagagtacatgggcgaggtgtttgatcatatgatgaagcgcatgtcctacagacgc
cagaagaggtggtggaatgcttacattcttttttatgaacgtatggacacaatggataaa
gacaatgaactaataaaatatatttcagaactagctatgaccactaaaccccaccagatt
aaaatgccatcagccattgagcgaagtgtacggaaacagaatgtgcaattcatgcataac
cgtatgcagtacagtctagaatatttccagtttataaagaaattgcttacttgtaacagt
gtctacttaaatcctcctccaggacaagatcacctgttgcctgaagcagaagaaataact
atgatcagtattcagctagctgctagatttctgttcaccacaggatttcacacaaagaaa
atagtccgtggccctgccagtgattggtatgatgcgttatgcatcctccttcgtcacagc
aagaatgtacgcttttggtttgcacacaacgtcctttttaatgtttcaaaccgcttttct
gagtaccttttggaatgccctagtgctgaagtgaggggtgcatttgcgaagcttatagta
tttattgcacatttttcattgcaagacggaccatgtccttcaccttttgcatctcctgga
ccgtctagtcaggcctatgataacttaagtttgagtgatcacttgctgagagcagtacta
aaccttcttagaagggaagtgtctgagcatgggcgccatttgcaacagtatttcaatctg
tttgtgatgtatgccaacctaggtgtagcagaaaagacacaacttctgaaactaagcgta
cctgcaacgttcatgcttgtggctctggatgaaggcccaggccctccaatcaaatatcag
tatgctgaactgggaaaattgtacactgtagtgtcacagctaatccgttgttgcaatgtg
tcatcacgtatgcagtcttctatcaatggtaatcccccactttcaaacccttatggtgat
cctaatttgtcacagcctataatggcacttcagcagaacgtggcagacattttgtttgta
cgaactagctatgtgaagaaaattattgaagactgtagcaactcagaagagaccatcaaa
ttgcttcgtttctgttgttgggaaaatcctcagttctcttccactgtcctaagtgaactt
ctctggcaggttgcatattcatacacctatgaacttcgaccttacttggatctgcttttg
caaatcctgttaattgaggactcttggcagacccacaggattcacaatgcacttaaagga
atcccagatgacagggatgggctatttgacaccattcagcgttctaagaaccattatcag
aaaagagcttaccagtgtatcaagtgcatggtagctcttttcagcaactgtcctgtagcc
taccaaatcttacagagcaatggagatttgaagagaaaatggacctgggcagtagaatgg
cttggagatgagcttgagcgtaggccatatactggaaatccacaatacacgtataataat
tggtctccccccgtgcagagtaatgaaacctcaaatggttacttcttggaaagatcacac
agtgctagaatgacccttgcaaaagcttgtgaactctgcccagaggaggaaccagatgac
ccagatgccccagatgaacatgaatcctccccaccagaagatgcgccattgtatcctcat
tcacccggttcccagtatcaacagaataaccatgtgcatggacagccatatacaggtcca
gcagcacatcatatgaacaaccctcaacgaactggccaacgagcacaagaaaattatgaa
ggcagtgaagaagtttccccgcctcagacgaaagattag
DBGET
integrated database retrieval system
