Caretta caretta (Loggerhead turtle): 125642899
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Entry
125642899 CDS
T09292
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125642899 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125642899 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_Teneurin
Ig_DSCAM-DSCAML_C
cEGF
Fn3_Dep-1_4th
Motif
Other DBs
NCBI-GeneID:
125642899
NCBI-ProteinID:
XP_048720779
LinkDB
All DBs
Position
9:complement(55601018..55728423)
Genome browser
AA seq
1448 aa
AA seq
DB search
MRGLAGWLVILALGKWVWVEGVVPLADFYPFGLEQGDAVTLKQDDGGSGLQPISVKFPFF
GVGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRQAGEVYYRESKD
QTILQRATKDIGQYFPEFLEFSALWVFVATWHRVTFFGGSSFSPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEMTT
NVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHLDLDECLSHPCQNSATCINGINSFSCQCPPGFKGAMCETVESPCEMKECQNGGQ
CQVANKTAVCVCQAGYTGDSCEIEINECESSPCLHRGRCIDLVDNYTCVCVEPFVGQRCE
TDPSPCEDRSCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRMPSACLSSPCQHGGNC
LETEQGYVCECPEGYTGTDCRDKLSEDCECRNGGKCLDGNFTICQCPPGYFGILCEFEVT
TTPCNMNTQCPDGGYCMEYSGSYLCVCHTDYGTNHSVPSPCDSEPCLNGGSCEAHDDSYT
CECPRGFNGRHCEKVRPRLCSSGPCRNGGTCKEADGEYHCACPYRFTGKHCEIGKPDSCA
SGPCQNGGTCFHYIGKYKCDCPPGYTGRHCEIAPSPCFLSPCENGATCEDNGSNYTCACP
AGYVGKLCQSEVDCGIPNEVKHAQVLFNSTRMGSLAEYQCERGYILSPQNNPRVCRAQGI
WSDPPECDEINECLSQPCFNRGLCKDRIAEFLCLCEAGYTGPHCELEIDECQSDPCKNGG
TCKDLPGSFACQCPDGFMGIQCETEVDACESAPCRNGGDCENYGGSYLCVCPEGFFGYHC
ETASDPCFYSPCGSRGYCLPSNGSHSCTCKVGYTGKSCEKELLPPTSLKVVRVEDTGVSI
SWYPPEDPVARQMIDGYAVTYVSFDGSYRRTDFVDRSHSAHQLRALASGRAYNISVFSVK
RNVNNKNDISRPVMLITRTRPRAVEGFDIANVTASTITVQWALHRLQHSSISKVRISIRQ
PGDLEDRTVELNSSVAKYTFRDLQPGERYLIHVSTLSGLETEDHPSESLAMAPFHVWTRP
LPPRNLTASRVSATSVYMTWDQPLAGSVEGYIINVTTNQSIKSRYVPNGKLSSYTVRDLL
PGQRYRLSMTAIQNTEQGQGHSEPAHVYILTLQRDGTPERRWGQAGHPRVLRNRLPPALL
PELRLLADHDILEEPSQAPRFTELVDGRRRISAKFSSLPSKSVTVRTQSEAPVKLENMEE
STNWVGLALQLLESENQKGNYDSRNCSTNPCKNGGTCVPGVEVYICDCIPGFKGRRCELA
CKKLPHSCTRLYSETKSFPVWEGGICHYLYKRVYKVHQDICYKESCESTASKKTGSRKQS
NNHALKKP
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctggctggctggctggtgatcctagccctggggaaatgggtttgggtcgag
ggtgttgtgcctctggctgacttttacccctttggcttggagcagggggacgctgtcact
ttgaaacaggatgatggaggctccgggcttcaaccgatctcagtgaaattccctttcttt
ggagtgggacacacaggactgtatgtaaacaacaatggaatcatctctttcttgaaggag
gtttcccagtttacgccagttgctttcccaatctccaaagaccggcgtgtggtagcagct
ttctgggctgatgtggataaccgacaggcaggcgaagtgtattaccgggaaagtaaggac
cagaccatcttgcagagagccaccaaggacattggacagtatttccctgaattcctggag
ttctctgccctatgggtttttgtggccacttggcaccgggtgaccttctttggaggaagc
tccttttctccagtaaacaccttccagattgtcctcatcactgacggtaaactctccttt
accatcttcaactatgagtctatcacttggaccacaggcatgcatgccagtagcggggga
gattttgctggcctgggaggcatcgcagcacaggcaggtttcaatgccggtgatggaaag
cgctacttcaacattcccggatcccgcactgatgacatcgtcgacgtggagatgactaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcaacaacacaacctccgtgtgtttgacgttacgcccctgtttgaatgggggaaag
tgtattgaggactgcatcacgggaaatccctcttacacctgctcctgccttgcaggcttc
acgggcaagagatgtcatcttgatttggatgagtgtctttcccacccgtgtcagaacagt
gccacctgcatcaatggcatcaacagcttcagctgtcagtgcccaccagggttcaaagga
gccatgtgtgagacagtggagtcaccctgtgaaatgaaggagtgccagaatggcgggcag
tgccaagtggcaaacaagacagcggtgtgtgtgtgtcaggcaggatatacaggagactcc
tgcgagatagaaataaacgagtgcgaatccagcccctgcctgcacagggggcgctgcatc
gacctggtggataactacacatgtgtgtgtgtggagcccttcgtgggacagcgctgtgag
acagacccctcgccatgtgaggacaggagctgcaggaaccggcagacctgtaactacatt
cgcccaggacgctacatctgcacatgttcgccgggctactacggcaacaactgccagtat
ggtgggcccagaatgccaagtgcttgtctctccagtccatgccagcatggggggaactgt
ctggaaaccgaacaaggctatgtctgtgaatgcccagagggatatacgggcactgactgc
agagacaagctctctgaggactgcgagtgtcggaacgggggcaagtgtctggatggaaac
ttcaccatctgccagtgtccacccggatattttggaattctctgtgaatttgaagtgacc
actacaccttgcaatatgaacacacagtgtccggatgggggctactgcatggagtacagt
gggagctacctgtgcgtgtgtcatacggactatggcaccaaccactctgtgccatctccc
tgcgactcagagccctgcctgaacggggggtcctgcgaagcccatgatgactcatacacc
tgtgaatgtccccggggcttcaacggcaggcactgcgagaaagtcaggccaaggctgtgc
agctccgggccatgtcggaacggggggacatgtaaggaggcagacggagaataccactgt
gcctgcccctaccgattcactgggaagcactgcgagataggtaaaccagactcctgtgcc
tctgggccatgtcagaacgggggcacatgtttccactacatcggcaaatacaagtgtgac
tgccccccaggctacacgggccggcactgtgagatagccccttctccttgtttcctgagt
ccatgtgaaaacggagccacctgcgaggacaatggcagcaactacacctgcgcgtgccct
gcaggatacgtgggaaagctctgccagtcagaggtggactgcggcattcccaacgaggtg
aagcatgcccaggtgctgtttaactccacccgcatgggctctctggctgaataccagtgt
gagcgaggctacatcttgagccctcagaacaacccccgtgtctgcagagcacagggcatc
tggagtgaccccccagagtgtgacgaaattaacgagtgcctttctcagccctgtttcaac
agaggcttatgcaaggatcgtatcgccgagttcctgtgcctgtgtgaagcaggatacaca
ggcccccactgtgagttggagattgatgaatgtcagtctgacccctgtaagaacggagga
acctgcaaggatctcccaggatcctttgcttgtcaatgtcctgatggcttcatgggaatc
cagtgcgaaacagaagtggatgcctgcgaatcagctccctgccgtaatggaggggactgt
gaaaactatggtggttcctacctgtgtgtctgcccagagggtttctttggctaccactgc
gagacggccagcgatccttgtttctacagcccgtgtgggagccgaggctattgcctgcct
agcaatggatcccacagctgcacctgcaaggtgggctacacaggcaagagctgcgaaaaa
gaactgctgccaccaacatcattaaaggtggtcagggtggaggacacaggggtgtcgatt
tcttggtacccccccgaagacccagtcgccaggcagatgattgacggctacgccgtgacg
tacgtatccttcgacggctcttaccgcaggacagattttgtggaccgaagtcattctgcc
caccaattgcgggcactagcctctggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaacgacatcagcaggcctgtcatgctcatcacgcgcactaga
cctcgcgcagtggagggatttgatatcgccaacgtgacggccagcaccatcacggtgcag
tgggcactccacaggctccaacactcctccatcagcaaggtgcgcatctccatccgccag
cccggggacctggaggaccgcaccgtggagctgaacagcagtgtggccaagtacacattc
agggacctccagccaggggagaggtatctcatccacgtgtcaaccctgagtgggctggag
acggaagatcatccctcagagagcctggccatggcacccttccacgtgtggactcggcct
cttcctccccggaacctcactgcctccagagtcagcgccacctctgtctacatgacctgg
gatcagccgctggcggggtctgtggagggttacatcatcaacgtcaccactaaccagagc
atcaagagccgctatgtgcccaacgggaagctatcgtcctacacggtgcgtgacctgctt
cccggtcagaggtatcgcttgtccatgacagccatccagaacaccgagcaaggccaaggg
cacagtgagccagcccatgtctacatcttgaccctgcagagggatgggacccctgagagg
cgatggggccaagcaggacacccacgggtgctcaggaacaggctccccccagcattgctg
ccagaactgcgcctgcttgctgatcatgacatcctggaggaaccctcgcaggcccccagg
tttactgagctggtggatggcagacggaggatcagtgccaagttcagcagcttgccgagc
aaatccgtcactgtgagaacacaatctgaggcaccagtgaagctggaaaacatggaggaa
tcaaccaattgggttggcctggcactgcagctgctggagtctgagaaccagaagggaaac
tacgatagccggaactgctccacaaacccctgcaaaaatggggggacctgtgtcccgggt
gtcgaggtctacatctgcgactgcatccccggcttcaagggcagacgctgtgaactagcc
tgcaagaagctgccccactcctgcactcggctgtactcagaaaccaagtcgtttcctgtc
tgggaaggcggcatctgccactacctatacaagagggtctacaaagtccaccaggacatc
tgctacaaggagagctgtgagagcactgcttcgaagaagacaggcagcagaaaacaaagt
aacaatcacgcactgaagaagccatag
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