Caretta caretta (Loggerhead turtle): 125643108
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Entry
125643108 CDS
T09292
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125643108 (FXR1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125643108 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
125643108 (FXR1)
mRNA cycle factors
Stress granule specific factors
125643108 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
125643108
NCBI-ProteinID:
XP_048721197
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All DBs
Position
9:complement(10799716..10863493)
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AA seq
678 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHAETTQLIILSASESTVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDTGTFRIYGESADAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKENIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPPSTRGPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNLPRETLAKNKNEMAKDVIEEHGPSEKAINGPANASGDEPSKPQHSPEEEKSS
TIQEEENNQEEAVLNGVS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgaccgtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgtccatgaggattcactcacagttgtatttgaaaacaattggcaaccagagcgc
caggttccttttaacgaagtcagattaccacctccacctgatatcaagaaagaaatagga
gaaggagatgaagtggaggtttactcaagagcaaatgaccaagaaccttgtggctggtgg
ctggcaaaagttcgaatgatgaaaggagagttttatgtcattgaatatgctgcttgtgat
gccacgtacaatgaaatagtcacatttgaacgacttcgacctgtgaatcaaaataaaact
gtcaaaaagaacacgttctttaagtgcacagtggatgttcctgaagatctgagagatgcg
tgcgctaatgaaaatgcacataaggattttaagaaagctgtaggagcttgtcgaattttc
taccatgctgaaactacacagttaataatactgtctgccagtgaatcaacagtgaagaga
gtaaatatattgagtgacatgcatttgcgcagcattcgtaccaagctaatgctcatgtca
agaaatgaagaagctacaaaacacttagaatgcacaaaacaacttgcagcagcatttcat
gaggaatttgttgtaagagaagatttaatgggacttgcaataggtacacatggtagtaac
atacagcaagcgaggaaagttccaggagtaactgcaattgagcttgaggaagatactggt
actttcaggatctatggagagagtgctgatgcagtaaaaaaggctagaagttacttggaa
tttgtggaagattttattcaggtgcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagattgtagacaagtctggagtcgtccgggtcaggattgaaggg
gacaatgaaaacaaactgcccagagaagatggaatggtcccattcgtatttgttggcact
aaagaaaacattggaaatgtccaagttcttttagaataccatattgcctacctgaaggaa
gtagaacagctaaggatggagaggctccagattgatgaacaactgcgtcagattggtatg
ggtttcagaccaccttccaccagaggtcctgaaaaggaaaagggctacactactgatgag
agtacactctcctcagtacaagggtccaggtcatatagtggaagagggagaggtcgcaga
ggccccaattatacatctggttatggtacaaactctgagctgtcaaatccctctgaaact
gaatctgagagaaaagatgaactgagcgattggtcactggcaggagaagatgaccgggag
agccgacatcagcgggacagcagaagacgtcctggaggaagagggcgtagtgtttctggg
ggtcgtggacgtggtggaccacgtggtgggaagtcatccattagctctgtgcttaaagat
ccggacagcaacccttacagcttacttgataacacagagtcagaccagactgtggacact
gatgccagtgaatctcatcacagtactaaccgtcgtaggcggtcacgcaggcgaaggact
gatgaagatgctgttctgatggatggaatgacagaatctgacactgcttctgttaatgag
aatggcttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtcacagtagctgattacatatcacgagct
gaatctcagagtagacaaagaaacctcccaagggaaacattggctaaaaacaagaacgaa
atggcaaaagatgtgattgaagaacatggcccttcagaaaaagcaataaatggccctgct
aatgcttctggggatgaaccttctaagccacagcatagtcctgaagaagagaagtcaagt
actatacaagaagaagaaaataatcaggaagaagcagtgctgaatggtgtttcataa
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