Caretta caretta (Loggerhead turtle): 125643109
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Entry
125643109 CDS
T09292
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125643109 (SOX2)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125643109 (SOX2)
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125643109
NCBI-ProteinID:
XP_048721199
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All DBs
Position
9:complement(10352988..10727890)
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AA seq
315 aa
AA seq
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MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQDQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcctcccgccccccagcaaacttcgggggga
ggcacgggcaactccaactcggccgccaacaaccagaagaacagcccggaccgggtcaag
agacccatgaacgctttcatggtgtggtcccggggccagcggcggaagatggcccaagag
aaccccaaaatgcacaactccgagatcagcaagcggctcggggcggagtggaaactttta
tccgaggcggagaagagacctttcattgacgaagccaagcggctcagagccctgcatatg
aaggaacacccggattataaataccgaccccggaggaaaaccaagaccctcatgaagaag
gataagtacacgttgcccgggggcttgctggcaccgggcaccaataccatgaccactggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttatgctcac
atgaacggctggaccaacggaggctatgggatgatgcaagaccagctgggctatccgcag
cacccgggcttgaacgctcacaacgcggctcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacttatatgaacggatcgcccacc
tacagcatgtcttactcccagcaagggaccccggggatggccctgggatccatgggctcg
gtggtcaagacggagtccagctcgagtccccccgtagtcacttcttcttcccattcaagg
gctccatgccaagctggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccggaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggtacagccattaatggcacacttcctctatcacatatgtaa
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