Caretta caretta (Loggerhead turtle): 125643139
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Entry
125643139 CDS
T09292
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125643139 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125643139 (U2AF1)
Spliceosome [BR:
ccay03041
]
Complex A
U2 snRNP components
U2 related factors
125643139 (U2AF1)
Complex B
125643139 (U2AF1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
125643139
NCBI-ProteinID:
XP_048721270
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All DBs
Position
1:156643064..156663227
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AA seq
243 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGGGGRERDRRRSRDRERS
GRF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctccatcttcggcacagagaaggacaaagtgaactgttcgttt
tatttcaaaattggagcttgccgtcatggggacagatgttctcgattgcacaataaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgaaatgcaggaacattatgatgaa
ttctttgaggaggtcttcacggaaatggaagaaaaatatggtgaagttgaggagatgaac
gtttgtgataaccttggagatcatctagttggaaatgtatatgtaaagtttcgtcgtgaa
gaagatgcagaaaaggctgtgattgatctgaacaatcgctggtttaatggtcagccgatt
catgctgagctttcacctgtgactgacttcagagaagcttgttgccgtcaatatgaaatg
ggagagtgtacgcgaggaggattctgtaactttatgcatttgaagcccatctcccgagaa
ttgcgacgtgaattatatggacgtcgtcgtaagaagcatagatccaggtcaaggtcccgt
gaacgtcgttctagatccagagatcgtggtcgtggaggcggtggcggaggaggaggcggt
ggcggaggaggaggagggcgggaacgtgataggaggcggtcaagagatcgtgaaagatct
ggtcgattctga
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