Caretta caretta (Loggerhead turtle): 125643168
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Entry
125643168 CDS
T09292
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125643168 (RLIM)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125643168 (RLIM)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125643168 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125643168
NCBI-ProteinID:
XP_048721347
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All DBs
Position
9:complement(71054814..71074071)
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AA seq
614 aa
AA seq
DB search
MFGILSHSFINMESSDSNDKGSIDHSEAQRRSQLDRLEREEAFYHFVNNLNEEDYRLMRD
NNLLGTPGEITEEELMRRLHQVKEGPPQQNGDENRVPFLLTGAESTEDVSNRDSIIDWLN
SVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNPNPEAENEQSVEPS
NGEDLENSQSDTETPRSESPSVRQPGSDRSTSEELATEEASPVRGQRRARSRSPEQRRTR
ARTDRSRSPINPASETPRRSPHNMPSQTLDHSLVNESEGSSRTRQHVTLRQHTTGTEIAS
ENAVLFSTPETRPAPPALGSSETNGSSESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIA
NRTRSRSQTPNNTVTYESERGGLRRTFSRSERAGVRTYVSTIRIPIRRIINTGFNETTSV
AIQTILRQIMTGFGELNYYMYSDGDADPSGPVPNQNVDAPELQNGGDSGGTSSHSESTEG
SSGEVYESSNEGGSTSVRREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTK
EQIDNLAWRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPIC
RRAVLASGNRESVV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatactttcccactctttcatcaacatggaaagctcagattctaacgataaa
ggaagtattgatcactcagaagcacagcgccggagtcagctggatcgattagaacgtgaa
gaagctttttatcactttgtaaataacctgaatgaagaggactataggcttatgagggat
aacaatttgctaggaacaccaggtgaaattactgaagaagaactgatgagaaggctacat
caagttaaagaaggtccaccacagcaaaacggtgatgagaatagagttccctttcttttg
acaggtgcagaatccacagaagatgtttctaatagagattccataatagactggcttaat
tcagtacgacagactggaaataccacacggagcgggcaaagaggaaaccagtcttggagg
gcagtgagccggactaaccctaacagtggtgatttcagattcagtttggaaataaatgtc
aaccgtaataatgggaacccaaacccagaagctgaaaatgagcaatctgtagagccctcc
aatggtgaggatttggaaaatagccaaagtgacactgagactccaagatctgaatcgcca
tctgtaaggcagcctggatcagacagaagtacctctgaggagttagcaactgaggaagca
tctcctgtcagaggccagagaagagcaagaagcaggagcccagaacaacgaagaacccgg
gctaggactgatagaagtaggtcacctattaatccagcaagcgagactcctcgtaggtct
cctcacaatatgccatctcagactcttgatcattccctggtaaatgaatccgagggaagt
tctagaactagacagcatgtgacgttaaggcaacatacaacggggactgagattgcaagt
gaaaatgcagttctgttttcaacccctgaaacaagacctgctcctccagcattaggttct
tcagaaacaaatggcagcagtgagtctgcagctcctggacagaggccacctaccatagtt
cttgatcttcaagtgagaagagtccgtccaggagaatatcggcagagagacagcatagcc
aaccgaacccgatccaggtcccagacaccaaacaatacagtcacttatgaaagtgaacgt
ggagggcttaggcgcacattttcacgttcagaacgggctggagtgagaacttatgtcagt
accattaggattcctattcgtagaatcataaacacgggctttaatgagacaacatcagtc
gcaattcagaccattctgaggcagataatgacaggttttggagaattaaactactatatg
tacagtgatggtgatgcagatcctagtggcccagtcccaaaccaaaatgtagatgctcct
gagctacagaatggaggtgatagtggtggtactagttcacacagtgaaagtaccgagggt
agctcaggggaggtatatgaaagtagtaatgaaggaggttcaacatctgttaggcgggaa
ggtcgcaatacgagaggatcagtcacttttgaagaaagtggctctttaccattccttagc
ctagcgcagttttttctactaaatgaggatgatgatgaccagccaagaggactcaccaaa
gaacaaattgacaacctagcgtggaggaattttggtgaaagcgatgctctgaaaacctgt
agtgtctgtattacagaatacacagaaggcaacaagcttcgtaaactgccttgttcccat
gagtaccatgtccactgcattgatcgctggttatcagaaaattccacttgtcctatttgt
cgtagagcagtcttagcatctggtaacagagaaagtgttgtctaa
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