Caretta caretta (Loggerhead turtle): 125643184
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Entry
125643184 CDS
T09292
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125643184 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125643184 (ATRX)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125643184 (ATRX)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125643184 (ATRX)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125643184 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125643184
NCBI-ProteinID:
XP_048721403
LinkDB
All DBs
Position
9:complement(71954220..72094092)
Genome browser
AA seq
2443 aa
AA seq
DB search
MTKIFGNVIGRPSFKMSESKLNTLVQKLHDFLAHSSEESEDANSPPRLSVSKSIGKSSGP
ENSPTPMENNREEGNSSSERSKSLGSSRSKRKPTVVTKYVGSDDEQTLPETVNEDVSNEN
SENDVDMKSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNIVKMKPEAPKKRGEEGLHGIV
SCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNL
ICCDFCHNAFCKKCILRNLGRKELSAIMDENNQWHCYICHPEPLLDLVTACDSVFENLEQ
LLQQNKKKIRVESEKSKIYDHTLKFSPKRNISNCNGEEKKLDDSYSGSLTYSYKALMVPK
DMLKKTKKLVETTTNMNASFVSFLKTAVENSEINSTIQLRQLKAFKSVLSDIKKAHLALE
EGLNQEIQALDVKIKEKNTKEKKTDIKLEKNEVKRDEGKEHVELKEDAVKSVKKAVSEQP
NNEPMDQNVPATTQTENKNTSSEDKKSETNEEPQYEPNSTEALDMDIVSVPSSVPEDIFE
TLESAMETQSAADEQGTGSTATELDNKSETINANIKCTTPSKEIKGGTKLKASAKVRKEL
FVKLTPVSLSDSPVKAEDQDSNPVKGDQNADVTPKAENCDSGKENHYIVNEHSPENETVL
LVEESDLRRSPRVKTTPLRRQTDMNPLTSNSEEDSNDAYCEKRKQKSSTQSRRKKDKRNS
SDSTTDHPKPNKLSKSKKADILDQSSDSDEMPAVLKEVAMMSPSSSDIDSNSETSNNQKN
GLNDLTKQPVKYENGKRKRKSSTSGSDLVAKKGKSTKGSTSAKKKRQNPSDSSNYDSELE
REIKSLSKIESAKKAKKKYPRKEENYDSSEDEQNKKGSTSKKKINLTKQQVESSDDAEKS
SPEKEEISHSSEDKKIRKGQIVNEKKSRDLQERTSKAKHDGSSDTEKSSLEKEESCHSSD
GKKRAEAKEKKNRNLKKRKVQNDSLDGTEKPAEKEQSCDSSEDKTKNKKETESKENKKEN
LKKKNYKKEHNGSSSDGDKSSPEKKSYISSENKSKKEMAVEEKRERNLRERTSKKLQNDS
SSDAEKSPKKEESSSEDVKRNKKRIEAKEKKKVSHKKKTSKKEQNDSLSSSDEEPYEDDK
KKSKKSSAKENKKGNLKVEKRISKKQKDDITCSSSSDEEENEDQNSAGDGSSDEQKIKPV
TESLILSSNTGFCQSSGDEGDTKSGAVPMEEEEDDDDPENRIAKKMLLEEIKANLSSDED
ASSDEESDEGKKKTGKKNENAEDDEENEKEDNSESDSDDEESKKPRYRHRLLRHKLSMSD
GESEEEKKGKSKDAKEGKRRNRRKVSSDDSDDSEFHESGVSEEVSESEDEQRPRTRSAKK
AEAEENQRSYKQKKKRRRIKVQEDSSSENNNKSNSEDEDDNDSKSPGKGRKKIRKILKDD
KLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKE
PIVQVHRNIVTKLKPHQVDGVQFMWDCCCESLKKTKKSAGSGCILAHCMGLGKTLQVVSF
LHTVLLCDKLDFSTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVSELATVKRPQERSY
MLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVICDEGHILKNE
ASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNG
QCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLAVRMTSIQCKLY
QYYLDHLTGVGSSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSL
DEFIASDSDETSMSLSSDDYAKKKKSKGKKAKKESSSSGSGSDNDVEVIKVWNSRSRGGG
EGNTEELANNPPSAVKSDESKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEI
LRMAEELGDKVLVFSQSLISLDLIEDFLELASRDKTDKDKPVIYKGEGKWFRNIDYYRLD
GSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQS
IFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTEL
YTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELT
EEERKAAWAEYEAEKKGLTMRFNMPAGTNMPPINFNSQTPYIPFNLGALSAMSNQQLEDL
INQGREKVVEATNSVTAVRIQPLEDIISTIWKENLTLTETQVQALALSRQASQELDVKRR
EAIYNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMN
PSTYQQIDMRGMYQAVSGGLQPPPLQRAPPPMRGKNPGPSQGK
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagatatttggcaacgtcatagggaggccttcgttcaaaatgagtgaaagcaag
ttgaatacattggtgcagaagcttcatgactttttggctcactcttctgaagaatctgag
gacgcaaactcgcctccaagactatctgtgagcaaaagtataggtaaaagtagtgggcct
gaaaatagtccaactccaatggaaaataacagggaagagggcaatagctcttcagaaaga
tccaaatctttaggatcatcacgttcgaaaaggaaacctacagttgtaacaaaatatgtt
ggatcagatgatgaacaaaccttacctgaaactgtaaatgaagatgtttcaaatgaaaac
tcggaaaatgatgttgatatgaaaagcttacctaaaggtacagtggttgtacagccagag
ccagtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcagaaatatc
gttaaaatgaaacctgaagctcccaaaaagcgtggagaggaaggtctgcatggaattgta
agctgtacagcctgtgggcaacaagtgaaccattttcaaaaggattcaatctatagacat
cctacactgaaagttcttatctgtaagacttgctacaaatattatatgagtgatgacatt
agccgtgattcagatggaatggatgaacagtgtagatggtgtgctgaaggtggaaattta
atttgctgcgacttttgccataatgccttttgcaaaaagtgcattttgcgcaacctgggt
cgaaaggagctgtcagccataatggatgaaaataaccaatggcattgctacatttgccac
ccagaacctttgttggacttggtcactgcatgtgacagtgtttttgaaaatttagaacag
ttattgcaacaaaacaagaagaagatcagagttgagagtgaaaaaagtaaaatatatgat
cacacactcaaattttctccaaagagaaatatttcaaattgtaatggagaagaaaagaaa
ttagatgactcatattctggttctttaacctattcctataaagcactaatggtgccaaaa
gacatgcttaaaaagacaaaaaaactggttgagaccacaactaatatgaacgctagtttt
gtaagttttttgaaaacggcagtagaaaattcagaaataaactctaccatacagctacgt
cagctgaaagcttttaaatctgtgttgagtgacataaaaaaagctcatttagcattagaa
gaaggtctgaatcaagagattcaagctttggatgttaaaatcaaagagaaaaataccaaa
gagaaaaaaacagatattaaactagaaaaaaatgaggtgaaaagagatgaaggaaaggaa
catgtagagttgaaagaggacgctgtaaagtcagtgaaaaaagctgtgtccgaacagcct
aacaatgagcccatggaccaaaatgttccagcaacaacacaaacagaaaacaagaatact
agcagtgaagataaaaagtctgagacaaatgaagagcctcagtatgaacctaatagtact
gaggctttagacatggatattgtgtctgttccttcatcagtccctgaagatatttttgag
actctagaatcggctatggaaactcagagtgcagcagatgaacagggcactggaagtaca
gcaacggagctggacaataaatcggagacaataaatgcaaatataaaatgtactacacct
tcaaaagaaattaaaggaggtaccaagttaaaagcgtcagctaaagtaagaaaagaattg
tttgtaaaactgactcctgtttccctttctgattctccagttaaagctgaagatcaagac
agtaatccagtaaagggagatcagaatgctgatgtaacacccaaggcagaaaactgtgat
tctggaaaagaaaatcattacattgttaatgaacactcacctgaaaatgaaactgtcctc
ttggtagaggaatctgatctcaggaggtctccacgtgtgaagactacacctctgaggcgt
caaacagacatgaatcctttaacatctaattcagaagaggacagcaatgacgcatactgt
gagaagcgcaagcaaaaatcatcaacccagtcaaggagaaaaaaagataaaagaaattct
tctgacagtactactgatcatcctaaacctaataagctttctaaatcaaaaaaagcagac
atattggaccaaagttcggattcagatgagatgccagcagtccttaaagaagtagccatg
atgagtcctagttcctcagatattgacagcaatagtgagacatccaataatcagaagaat
ggtttaaatgatctaacgaaacaaccagtgaagtatgagaatggaaagcgcaaaagaaaa
agctccacttctggttcagatttagttgccaaaaaaggcaaatcaactaaaggctccact
tctgcaaaaaagaaacgacagaacccttcagattcttcaaattatgactcggagttagaa
agagagataaagagtttgagtaaaatagagtctgcaaaaaaagccaaaaagaaatacccc
agaaaagaagagaattatgattcttctgaagatgagcagaataaaaaaggatctactagt
aagaaaaaaataaatttgacgaaacagcaggttgaatcatctgatgatgctgagaagtca
tccccagagaaagaggagattagtcattcttctgaagataaaaaaattaggaaggggcaa
atagtcaatgaaaagaaaagcagagatttacaagaaagaacttcgaaggcgaagcatgac
ggatcgtctgatactgagaaatcatccctggagaaagaggagagttgtcattcttctgat
ggtaaaaagagagcagaagcaaaagaaaagaaaaacagaaatttgaaaaagagaaaggta
cagaatgattctttggacggaactgagaagcctgcagagaaggagcagagttgtgattct
tcagaagacaaaaccaagaataaaaaagaaacagaaagtaaagaaaacaaaaaagaaaac
ttgaaaaagaaaaattataagaaagaacacaatggttcttcttctgatggagataaatca
tccccagagaaaaagagttacatttcctctgaaaataagagtaaaaaggaaatggctgtt
gaggaaaagagagagagaaatttgagagagagaacatcgaagaagttgcagaatgattcc
tcttcagatgctgagaagtccccaaagaaagaggagagttcttctgaagatgttaaacgg
aataaaaaacgaatagaagctaaagaaaagaaaaaagtaagccacaaaaagaaaacttcc
aagaaagaacagaatgattcattgtcctcttctgatgaggagccttatgaagacgataaa
aaaaagagtaaaaagagttcagctaaggagaataaaaagggtaacttaaaagtggaaaaa
agaatttctaaaaaacagaaggatgacatcacctgttcctcctcatcagatgaggaagaa
aatgaggaccagaattcagcaggcgatggaagcagtgatgagcagaagattaagcccgtg
actgaaagcttaatactgtcctccaacacaggattttgtcagtcttcaggggatgaagga
gatactaaatccggggctgttccaatggaggaggaggaggatgatgacgatcctgagaat
agaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggat
gcatcttcagatgaagaatcagatgaaggaaaaaagaagacgggaaagaaaaatgaaaac
gcagaagatgatgaggagaatgaaaaagaagataattctgaatcagattcagatgatgaa
gagtctaagaagcctagatatagacacagactgctgagacacaagctaagtatgagtgat
ggagaatctgaagaagaaaaaaagggaaaatctaaagacgcaaaagaaggcaaacgcaga
aatagaaggaaagtgagcagtgatgattcagatgactcagaatttcatgaatctggagtt
agtgaagaagtcagtgaatctgaagatgagcaacgtcctagaacaagatctgctaaaaaa
gctgaggcagaagaaaatcagcggagttacaagcagaaaaagaaaagacgacgcataaag
gttcaggaggattcttctagtgaaaacaataataagagtaattctgaggatgaagatgac
aatgattcaaaatctcctggaaaaggccggaagaaaatacgaaagattcttaaagatgat
aagcttagaacagaaacacaaaatgcactgaaggaggaggaagagagaagaaaacgtatt
gcagaaagagaaagagagagagagaaattaagagaggtgatagaaatagaagatgcttca
cctctaaagtgtccgatcacaactaaactggttttagatgaagatgaagaaaccaaagaa
cctatagtacaggttcacagaaacatagttaccaaactgaaaccacatcaagtagatggt
gttcagttcatgtgggattgctgttgtgaatctttgaaaaaaacaaagaaatctgcaggt
tccggatgcattcttgcccactgcatgggtctaggaaaaacgttgcaggtagtgagtttt
ctccatacagttctgttgtgtgataaactggatttcagcacagctctcgtggtgtgtcca
ctgaacactgccttgaactggctgaatgagtttgaaaaatggcaagaaggtttagaagat
gatgagaaactagaggtttctgaattagcaactgtaaaacgccctcaagaaagatcctat
atgctgcagcgatggcaggaagatggaggagttatgatcataggttatgagatgtaccgt
aatcttgcacaaggcaggaatgtgaaaagtagaaaacttaaggaaatatttaacaaggct
ctggttgatccaggccctgactttgttatttgtgatgaagggcacatattaaaaaatgaa
gcttctgctgtttctaaagctatgaattctatacgatccaggaggagaataattcttaca
ggaacacccctgcagaataatcttatagaatatcactgcatggttaattttatcaaggaa
aatttgcttgggtcaattaaggaattcagaaatcggtttataaatccaatccagaatggt
cagtgtgcagactccaccatggtagatgttagagtaatgaagaagcgtgcccacatactg
tatgagatgctagctggatgtgttcagaggaaagattacacagcattaacgaagttcctg
ccaccaaaatatgaatatgttttagcagttagaatgacatctattcagtgtaagctgtat
cagtactacttggatcacttgacaggtgtaggtagtagcagtgaaggtggaagaggcaaa
gctggagcgaagctcttccaggacttccagatgttaagcagaatctggactcacccttgg
tgtttgcagctggactatattagtaaagaaaataagggctactttgatgaagacagtttg
gatgagttcatagcttcagattcagatgaaacttcaatgagtttaagctctgatgattat
gctaagaaaaaaaaatccaaggggaagaaagcgaagaaagagagtagctcaagtggaagt
ggaagtgataatgatgttgaagtgattaaagtctggaattcaagatctcgtgggggtgga
gaaggaaatacagaggaacttgcaaacaaccctccatcggctgtaaagtcagacgaaagt
aaagccacatcctcttccaacccaggcagcccagctccagactggtacaaagattttgtc
actgatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctctttgaaatt
cttcgcatggctgaagagcttggagataaagttctagtttttagccagtctctaatatca
ctggatttgatagaagattttctggaactggcaagcagggacaaaactgacaaagataaa
cctgttatttataaaggtgaaggaaaatggttcagaaatattgactactatcgtttagat
ggttcaaccacggctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaat
gtgagaggtcgtttgtttattatttccactaaggcaggatcccttggaattaatctggtg
gctgctaatagagtgattatctttgacgcctcttggaatccatcctatgatattcagagt
atctttagggtttaccgctttgggcagaacaaacctgtgtttgtgtacaggttcttggct
cagggaacaatggaggacaagatatatgatcgtcaagtaacaaagcagtcactgtctttc
cgagtagttgaccagcagcaggttgagcgtcactttaccatgaatgagcttacagagctc
tatacctttgagccagacttgctggatgaccctaattcagaaaagaaaaagaagagggat
acacccatgctgccaaaggatacaattctggcagaattgcttcagatccacaaagaacat
atagtgggctatcatgagcatgattccctcctagaccataaagaggaggaagaattgacc
gaagaggaaaggaaggcagcttgggcagaatatgaagctgaaaaaaagggtctgaccatg
cgcttcaacatgccagctgggactaatatgccccctatcaatttcaactctcaaactcca
tatattccgttcaatttgggagcattgtcggcaatgagtaaccaacagctagaggacctc
attaatcaaggaagagaaaaagttgtggaagcaaccaacagtgtaactgcagtaagaatt
cagccccttgaagatataatttcaactatatggaaggaaaatctgaccctgacagagacc
caagtgcaggccttggccctaagcagacaggcaagccaggagcttgatgttaagcgccga
gaagccatctacaatgatgtcttgacaaaacaacagatgttaatcagttgtgttcagcgg
atactcatgaacagaagactacagcagcagtacaatcagcagcagcagcagcaaatgtct
tatcagcaagcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaac
ccttccacctaccagcagatagatatgagaggaatgtatcaggcagtttctggtggtctg
cagccaccgccattgcagcgtgccccacccccaatgagaggcaaaaatccaggaccttcc
caagggaaataa
DBGET
integrated database retrieval system
