Caretta caretta (Loggerhead turtle): 125643405
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Entry
125643405 CDS
T09292
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125643405 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125643405 (ABCA3)
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125643405 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_22
AAA_23
AAA_30
AAA_29
SRP54
CrtO
Motif
Other DBs
NCBI-GeneID:
125643405
NCBI-ProteinID:
XP_048721877
LinkDB
All DBs
Position
10:49274247..49368687
Genome browser
AA seq
1731 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTVIEMCLPLLFAAILIALRNRVHSISHPNATIYPSQ
SVDELPWFFHHRKLNPWELAYIPSNSTAVKSIAEAVEKALHINIKAQGFPSEREFEDYVK
FDNRSGNVLAALVFKHCFNQSKDPLPLQVNYQLRFKYSPRNAPRNEQTGLNPNLDRDWHT
SYLFPLFQLPGPREAKFPDGGTPGYIREGFLAVQHAVDRAIMQYHANTSTTRLLEGVTVT
VRRFPYPPYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMRMMGLSN
WLHWSAWFLMFFLFLLVSIFFVTVLFCVKVSQQGAVLANSDPTLVFTFLVVFSISSISFS
FMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLSSCLISNVAMAMGAQL
IGMFEGKGTGVQWQDLMKPVSVDDNFTFAQVLGMLLLDSVLYGLVAWYVEAVFPGEYGMP
QPWYFFLMPSYWCRTPRTVLGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVFK
VGSKTKEAVRNLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLYPPTSGQAYISGYEISQD
MVLIRRSLGLCPQHDVLFDNMTVAEHLYFYSALKGYPSLKCPEEIDRIVRLLNLEEKRCS
LSKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQHQRSSRTILLTT
HFMDEADLLGDRIAIMAQGELQCCGSSLFLKHKYGAGYHMVMVKEPYCNLGEISRLICQY
VPNASLESNAGAELSFILPTESTHRFEALFTELEQKREELGIASYGASVTTMEEVFLRVG
KLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKLN
TGFYLRCQQFYAMFVKRAVYSWRNWKMVVAQFLVPLIFTTLALVVAKTFPGPRDSALLRL
TLDPYGKTVVPFSVSEASRISPRLAEQFAVLLDAQGQVPQEVLGDLEEYLISRAAEEGGT
FNERYIAAASFGEVKNRTVITALFNNQAYHASATALMLADNALFRLLAGPNASITVTNYP
QPRNITETAKDQLMEGQTGFAIAINLLYGMASLSSTFALLLVSERAIKAKHVQFVSGVYV
ANFWLSALLWDLINFLIPCALMLVIFQAFDVKAFTQDSHLVDVMLIFLLYGWAIIPLMYL
LSFFFSAAATAYTRLTIFNIFSGTTTFLTVTIMSIPELGLMDLSKTLDKIFLILPNYCLG
QCISDFYQNYEFIQFCTSSIEANIICKAFNISYQMNYFSWETPGIGQYLTSLSVQGTAFL
LLLFLIETNLLWRLRTFICSISRRRKWAMLLNRIPVLPEDRDVADERKKVLESPPELLSS
LSSPLVIKELTKVYNSSESLLAVDRISLAVNKGECFGLLGFNGAGKTTTFKMLTGDESIT
SGDAYVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSLYARLRGIPERYIGSCVE
NMLRGLLLEPHADKLVRSYSGGNKRKLSAGVALIGGPPVIFMDEPSTGMDPVARRLLWDA
VTRTRECGKSIIITSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKTR
AEEEGDMQVFKAFVEKMFPGSVLKHEHQGMVHYHLTNKNLSWAQSRESHPASCAFPSGLR
GAGESQREVPRGGLFCQPDLPGAGLHELHPLPALHRGAREMNRNPPAPLLD
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgttaaggcagtttgggttgcttctctggaagaactacattttgcagaagcga
cagattttggtaacggtcatagaaatgtgcttgccgttgctgtttgccgcaatcctcatt
gcactccgcaacagagtgcattcgatcagccaccccaatgccactatctaccccagccag
tcagtggacgagctgccatggtttttccatcaccggaagctcaacccctgggagctagct
tacatcccctccaacagcactgctgtgaagagcatcgcggaggcggtggaaaaggcgttg
cacatcaatatcaaagctcaagggttcccttcggagagggagtttgaggactacgtgaag
tttgataaccgctcgggtaatgtgctggccgccctcgttttcaaacactgcttcaatcag
agcaaggaccccttgccgctgcaggttaattatcaactgcgcttcaaatacagccctcgg
aatgccccccggaacgagcagacaggcttgaaccccaacctcgaccgtgactggcacacc
agctacctgttcccacttttccagttaccgggccccagagaagccaagttccctgatgga
gggactccaggttacatccgggaagggttcctggccgtgcagcatgctgtggacagagcc
atcatgcaataccatgccaacacctctaccacccgcctgctggagggggtcactgtgacc
gttcggcgcttcccctaccccccatacgtcaatgacctcttcctactggccatccagaac
cagctgcccctgctgctcatgctgagcttcacttatacctcgctcaacatcgtccgtgcc
gttgtgcacgagaaggagaaaaagttgaaggagtacatgcgaatgatgggcctcagtaac
tggctgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtccatcttc
ttcgtcacggtgcttttctgtgtcaaggtaagccagcagggggcggtactcgccaacagt
gacccaaccctggtgttcaccttcctggtggtcttctccatctcctccatctccttcagc
ttcatggtcagcaccttcttctccagagcaaatgtggcagctgccgctgggggtttcctg
tactttttctcctatatcccctacttctttatctcgcctcgctacgacctgatgtcccac
agtcagaaactgtcgtcctgcctcatctccaatgttgccatggccatgggggcacagctg
ataggcatgtttgaaggaaaagggaccggcgttcagtggcaggacctcatgaagccagtc
agcgtggatgataacttcacctttgcacaggtgctggggatgctgctgttggactctgtc
ctctatggcctggtggcctggtacgtggaggccgtcttcccaggggagtatggcatgccg
cagccatggtacttcttcttgatgccctcgtactggtgcaggactcccagaaccgtcctg
gggaaagagaaggaggaagaggaggacccggagaaggcactgaaaagccagtacattgag
gaagagcctgccgatctggtatcagggatcaaaataaagcacctttccaaggtgttcaaa
gtggggagcaagaccaaggaggcagtaaggaacttgaccctgaacatgtatgaggggcag
atcactgtccttctgggacacaacggtgccgggaagacaaccaccctgtccatgctcaca
ggtctgtatcctcccacgagcggccaggcttacatcagcggctatgagatctcccaggac
atggttctgatccgaaggagtctgggtctgtgtccccagcacgatgttctgtttgacaac
atgaccgtggcggagcacctgtacttctactctgcgctgaagggctacccctcgctgaag
tgcccggaggagatagaccgtatcgtgaggctgctgaacctggaggagaagcgctgctct
ctgtcaaaggccttgtccgggggcatgaaacgcaagctgtccatcggcatcgcactcatc
ggggactccaaggtggtgatgctggatgagccgacatcaggaatggacccagcctcccgc
agggccacctgggacctcctccagcaccagaggagcagccgtaccatcctgctgaccacc
cacttcatggacgaggcagacctgcttggagaccgcattgccatcatggcccagggcgag
ctgcaatgctgcgggtcctcgctcttcctcaagcacaaatatggtgctggctaccacatg
gtgatggtgaaggagccgtactgtaacctaggggagatctcccgcctcatttgtcagtac
gtgcccaatgccagcctggagagcaatgctggggccgagctgtccttcattctgcccaca
gagagcacacacaggtttgaggcactgttcacagagctggagcagaaacgggaggagttg
gggatcgctagctatggtgcatctgtcaccactatggaggaggtcttcctcagggttggg
aaactggtggactccagcatggatatccaagccatccaactccctgccctgcagtaccag
cacgagaggcggtccaatgactgggccatggatgactccagcagcctgagtggaatgact
gacatgactgatgatagtggggctctgatcacggaggattgctccagtatcaaactgaac
acggggttctacctgcgctgccagcagttctatgccatgttcgtgaagagggcagtgtac
agttggcgcaactggaagatggtggtagcgcagttcctggtgcctctgattttcacaacc
cttgctctggttgttgccaagaccttccccgggccaagagattctgcgctgctcaggctg
acgctggacccgtatggcaagactgtcgtgcctttctctgtctctgaggcatccaggatc
tccccaaggctggcggaacagtttgcagtgctactggatgctcagggccaagtgccccag
gaggtgctaggtgacctggaggagtacctgatctcccgagcggcggaggagggcggaact
ttcaacgaacgctacatcgcagctgcttccttcggagaggtcaaaaaccgcacggtgatc
acggcgctgttcaacaaccaggcgtatcatgcctccgccactgcactgatgctggcagac
aacgccctgttccggctgctggctggacccaatgcttccatcactgtcaccaactatccc
cagccccggaacatcacagagacggcgaaggaccaactcatggaaggccagactgggttc
gccattgctattaacttgctctatgggatggcttccttgtccagcaccttcgcgctcctg
ctggtcagcgagagagccatcaaggccaagcacgtgcagtttgtcagcggggtctacgtg
gccaatttttggctctcggccctgctttgggacctcatcaatttcctcattccctgtgcg
ctgatgctggtgatattccaagccttcgatgtgaaagctttcacccaggacagccacctt
gtcgatgtgatgctgatcttcctgctctacggctgggccatcatccccctcatgtaccta
ctcagcttcttcttttcagcggcagctacagcctacacgcgcctcaccatcttcaacatc
ttctctggcacgaccaccttcctcacggtcacgatcatgagcattccagagctgggcctc
atggacctgtccaaaaccctggataaaatcttcctgattttgcccaactactgcttgggc
cagtgcatcagtgacttttaccagaactacgagttcattcagttttgcacctcttccatt
gaagccaacatcatctgcaaagcattcaatatcagttaccagatgaattacttctcatgg
gagactccagggattgggcaatatctgacttccctgagtgtccagggaaccgccttcctc
ctcctcctcttcctcattgaaactaacctcctctggagactgaggaccttcatctgcagc
atcagtaggaggcggaaatgggcaatgctgctgaacaggatccctgtgctgccggaagac
agggatgtggcagatgagagaaagaaagttttggagtccccgccagagctgctgtcatcg
ctgagcagcccgttggtcatcaaggagctcaccaaggtgtataacagcagtgagtccctg
ctagctgtggacagaatctctctggcggtcaacaaaggggagtgcttcggcctgctcggc
ttcaatggagccggcaaaaccaccaccttcaaaatgctaacgggcgacgagagcatcacc
tcgggggatgcctacgtggacggccacagcattctggccaacatcaaaaaggtccagcag
cggattggctactgccctcagtttgatgccctgttggatcacatgacggggcgggagaca
ctgagcctgtatgcccggcttcgggggattcccgagcgctacatcggcagctgcgtggag
aacatgttgcgagggctgctcttggagccccacgcggacaagctagtgaggtcctacagc
ggtggcaacaagcggaagctgagcgctggcgttgccctgatcggcgggcctccagtgatc
ttcatggatgagccctccactggcatggaccctgtggcccggcgcctgctctgggatgcc
gtgaccaggacacgagaatgcgggaaatccatcatcatcacctcccacagcatggaagag
tgcgaggccttgtgcaccaggctggccatcatggtgaacgggcagttcaaatgcctgggc
agcccccagcacctgaagagcaagttcggcagcggatacaccctgctggcaaaaaccagg
gccgaggaggagggcgacatgcaggtgttcaaggcctttgtggagaagatgtttccaggg
agcgtcctgaagcacgagcaccaaggcatggtccattatcacttgaccaacaagaacctc
agctgggcacagtccagagagtcccacccggcctcttgtgccttcccctcaggtcttcgg
ggcgctggagagagccaaagagaagttccacgtggaggattattctgtcagccagatctc
cctggagcaggtcttcatgagcttcacccgcttccagcactgcacagaggagcgagggaa
atgaacagaaacccaccggcccccctcctggactga
DBGET
integrated database retrieval system
