Caretta caretta (Loggerhead turtle): 125643549
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Entry
125643549 CDS
T09292
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04260
Cardiac muscle contraction
ccay04261
Adrenergic signaling in cardiomyocytes
ccay04814
Motor proteins
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125643549 (TPM1)
04820 Cytoskeleton in muscle cells
125643549 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125643549 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
125643549 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125643549 (TPM1)
04147 Exosome [BR:
ccay04147
]
125643549 (TPM1)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
125643549 (TPM1)
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of microglial cells
125643549 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
Laminin_I
TMF_DNA_bd
Lebercilin
GAS
ERM_helical
ATG16
PUMA_CC
CENP-F_leu_zip
XhlA
MscS_porin
DUF745
DUF1664
FH2
Motif
Other DBs
NCBI-GeneID:
125643549
NCBI-ProteinID:
XP_048722279
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All DBs
Position
10:33615410..33638376
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AA seq
297 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVALQKKLKGTEDELDKY
SESLKDAQEKLEVAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVTKLEKSIDDLEDKFLCFTSPKISSSSWINHLSKLLDVSWVHCPVLQLIFSF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctcgacaaggagaacgccctggac
cgagccgagcaagccgaagcggacaagaaggcggcggaggacaggagcaagcagctggag
gacgagttggtggctctgcaaaagaagctgaagggcactgaggatgagctggacaaatac
tccgagtccctgaaagatgcccaggaaaagctggaagtggctgagaaaaaggccgcagac
gctgagagcgatgtagcttctctgaacagacgtatccagctggttgaggaagagttggat
cgtgctcaggagcgtttggcaactgctctgcagaagctggaggaggctgagaaggcagca
gatgagagtgaaagaggaatgaaggtcatagagaacagagcccagaaggatgaggagaaa
atggaaatccaggagatccagcttaaagaggccaagcacattgctgaggaggctgaccgc
aagtatgaagaggtggctcgtaagctggtgatcattgagagcgatctggagcgtgctgag
gaacgtgctgaactctcagaaggcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggcagagaagtactcacaaaaggaagacaaa
tatgaagaggagattaagatcctgactgacaaactgaaggaggctgagacccgtgctgaa
tttgctgagaggtcagtaaccaagctggagaagagcatcgacgacttagaagataaattt
ctttgcttcacctctccaaagatatcttcatcaagctggataaaccacctttccaagctc
ttggatgtttcatgggttcattgtcctgtcctccagcttattttttccttttag
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