Caretta caretta (Loggerhead turtle): 125643592
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Entry
125643592 CDS
T09292
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125643592 (CACNA1H)
04020 Calcium signaling pathway
125643592 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125643592 (CACNA1H)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125643592 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
125643592
NCBI-ProteinID:
XP_048722436
LinkDB
All DBs
Position
10:complement(78596758..79080716)
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AA seq
2500 aa
AA seq
DB search
MTDGERREPFQPLASDEVRVPIASLPSQAAQPGEDEDVLSPCKSIQGSLGSGGSSARDPA
QEDEEQVPYPALAPTVFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPC
EDVDCKSERCTILEAFDHFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGM
MEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFI
FGIVGVQLWAGLLRNRCFLDSNFAMTYNFTLRQPYYQPEGEENPFICSSHRDNGMQKCSN
IPNRKEYRVECTLSMDSYNQNLYNPDFSNRSACINWNQYYNVCKAGDVNPHNGAINFDNI
GYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSE
TKQRENQLMKEQRARYLSNDSTIASFSEPGSCYDELLKYICHIFRKVKRRTLRLYNNWQS
KRRKKVTPNSAPSGQSHRSKKRITSIHHLIHHHHHHHHHYHVSNGSPRGLRSNPEICDLE
LKAMKSGSQLMLPSPSPNLHSPPPHVDSESVHSIYHADCHVEGPQVKCKSSNASASIKLT
AGLTTNHGNMNYPTILPSPASKASSAPVPKGKESGSPPVAMVNSPVSVNAAPFEKLHQLM
GEHGLCRTSSRLSGLNMPCPLPSPQPSTLTCELQNCPYCANILEDPEFEFSESDSYDSDN
NGVYEFTQDLRHGDQRDQIQQQRNKKRKKKKPKERNKVARLWVAFGNKLKRIVESKYFNR
GIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMVLKLLAFGIFGYIKNPY
NIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVAT
FCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWN
VVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSAN
FDEDFEKLRDLRATEMKMYSLAITPNGHVEGRGSVPPPIIMRTAATPMPTPKCSPHMDSV
HTFVDSRRGSNASVDPLSYDQKSLSSLRSSPCANWGPNSNWGSRRSSWNSLGRAPSLKKK
NQSGERESLLSGEGKGSTDDDSDDAKSSTVSRATLHRRAESLDYRSSLDLPELLQLPTMR
HSLSINPLAVLPAEYQDCNGKMVHVPSEFFLRIDSHKDDPLDYDDDMDDSYCYRIRKALE
PYKPEWCKNHEDWSLYLFSPQNRIRAMCQKVIAHKMFDHVVLVFIFLNCITIALERPDID
PHSMERIFLSVSNYIFTAIFVVEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDI
IVSMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCA
FFIIFGILGVQLFKGKFYYCEGPDTKNISTKADCTSVHYRWVRRKYNFDNLGQALMSLFV
LSSKDGWVNIMYNGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFH
KCRQHQEAEEARRREEKRLRRLEKKRRSKELYMSEAQRRPYYADYSPTRRYIHTLCTSHY
LDLFITFIIGVNVITMSMEHYNQPKTLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFK
DRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRAL
LDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFTNFGMAF
LTLFRVSTGDNWNGIMKDTLRECTKEDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAV
LMKHLEESNKEAKEDAEMDAEIELEMSRGGSTPANSGGGSGTSASDVRAPYGSQEARKPE
SPMRVKHQALEALSCENVSLAIPDSDPLEGRETPRMENTSFRSAPHHHVLTPSHKTPGCE
SEEGAACMRSKREPQNFLTVRKISVSRMHSLPNDSYMFRPVMPAKAPYPLHEVEMETYAC
KSQRGSVTSIRSQPVGTCSSLRVPRELLQVTAVSSHRDSCDTCKIPSPQSTSRSPSLNRL
LCRQEAIRTDSLDGQNTDSKDSLQAESSESLQLKKQSQSNLGAALFHPSPLSQPGTPPQS
PTSSSHHRHPSVRTRKHAYSQHSIPSRPSSQNSNPASPENSLFESSDLADEEVSHINSSV
KDWQEQPEIRSRSVSPFISPASSLVPLKNCSTASLARSNSRERDLRKFYSVDTKGFLDKP
SWADDQRRHSIEICPSIDNGDGSLEQPAEGKERSPVHIQSESEYIPGARRKKKMSPPCIS
IDPPMEDESSTASRTKASENSMLRRRTPSCESTAYRDSLDMTDSQPGEQASKAERRVQPP
CRGEHLTIPNFSFEQSDPSSSSSLSDLLLDSGQAMPSGVVSVDSRPDATALELKKLDHLK
TQCNNPEKNKELLGVTKSPKRRHELVPVTVATDEDIDKPV
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggagagagcccttccagccactggcgagtgacgaagtccgggtg
cccatagcctccctccccagccaggcagcccagccgggagaggacgaggatgtgctcagc
ccttgcaagtcgatccagggcagcctgggctctggaggctcctctgcccgggatccagcc
caagaggacgaggaacaggtcccttacccggccctggcacccactgtcttcttctgcctc
aagcaaaccacccggccacgcagctggtgcctcagactggtttgtaacccctggttcgag
catgtcagcatgctggtcatcctgctgaactgtgtcaccttgggcatgttccagccctgc
gaggatgtggactgcaagtcggagcgatgcaccatcctggaggcatttgaccatttcatc
ttcgccttctttgctgtggagatggtcatcaagatggtagctctggggatcttcgggcag
aagtgttacctaggagacacatggaatcgcctggacttcttcatcgtaatggccggcatg
atggaatattctctggatgggcacaacgtaagcttatctgccatccgaactgtccgggta
ctcaggcctctacgagccattaacagggtcccaagtatgcgaatactcgttaccctgctg
ttagatactctgcctatgttaggcaacgtccttctcttgtgcttctttgtctttttcatc
tttgggattgtcggcgtgcagctctgggcagggctgctcagaaacaggtgtttcctagac
agcaactttgcaatgacatataactttactttacggcagccgtattaccagccggaagga
gaggagaatccattcatctgctcgtcccatcgggataacggcatgcagaaatgctccaat
atcccaaacaggaaggagtacagggtggagtgcaccttgagcatggactcctacaaccaa
aatttgtataacccagatttcagcaacaggagcgcttgcataaactggaaccaatattac
aacgtatgcaaggcaggggatgtaaacccgcacaatggagctattaattttgataacatt
ggctatgcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatg
tattatgttatggatgcgcattctttttacaattttatatattttatattgcttataata
gtgggctctttcttcatgattaacttgtgcctggttgtgatagcaacgcagttttctgaa
acaaagcagcgggagaaccagctgatgaaggagcagcgtgcccgctacctctccaacgac
agcacaatcgccagcttctcggagccgggcagctgctacgatgagcttctcaaatatatc
tgccacatcttcaggaaggtaaagcggcggacgttacgcctgtacaacaactggcagagc
aagcgccggaaaaaggtcacccccaacagcgcccccagcgggcaaagccacagaagcaaa
aaacgcatcacctccatccaccacctcatccaccaccatcaccaccatcaccatcactac
cacgtcagcaatgggagccctcgggggctccgctccaaccctgagatctgtgacctggag
ctgaaggccatgaagtctgggagccaactgatgcttccatctccatcccccaacctgcat
agccctcctcctcatgtggattcagagtctgtccatagcatttaccatgccgactgccac
gtcgaaggaccccaggtgaaatgcaagtcttccaatgcctctgcaagtattaaactgacc
gctgggctcaccaccaaccatggcaatatgaattatccaaccatcttgccttctccagct
agcaaagccagttctgccccggtacccaaagggaaggaaagtggcagcccccctgtggcc
atggttaatagccctgtgagtgtgaatgcagctccttttgagaagctccatcaactgatg
ggagagcatggtctgtgtaggacttccagcaggctgtcgggtttgaacatgccgtgccct
ctgcccagcccccagcccagcaccctgacttgcgaactccagaactgcccctactgtgct
aacatcctggaggatcccgagtttgagttcagtgagtccgacagctacgactctgacaac
aacggcgtctacgaattcacgcaggacctgaggcacggagaccaaagagatcagatccag
cagcagaggaataagaagaggaagaagaagaaaccaaaggagaggaataaagtcgctaga
ctttgggtggcttttggcaacaagctgaaaaggattgtggagagcaagtatttcaaccgg
gggattatgatcgccattctgatcaacacgctgagcatgggaattgagtatcacgagcag
ccggatgaattgaccaacgctttggagatcagtaacattgtcttcaccagcatgtttgcc
ctggagatggtcctcaagctccttgcctttggtatcttcggttacatcaagaacccatac
aacatcttcgacgggatcatagtcatcatcagtgtctgggagatcattggccaatccgat
ggaggcctttctgtgttaagaacttttcggctgctcagggtcctcaagctggtacgcttc
atgcctgcccttcgccgccagctggtggtcctgatgaagacgatggataacgtggccacc
ttctgcatgctgctcatgctcttcatctttattttcagcattctcggcatgcatcttttt
gggtgcaagtttagcttgaaaactgatacgggggacacagttccagacagaaagaatttt
gattccttgctctgggccattgtgaccgtgtttcagatcctcacccaggaagactggaac
gtggtgctctataatggcatggcatccacctcctcgtgggcggcactctacttcgtggcc
ctgatgacctttggcaactacgtgctcttcaacctcctagttgccatcctggtagaaggc
ttccaagcagagggtgatgccaacaggtcggacacagatgaggacaagacatctgccaac
ttcgatgaggattttgagaagctgagagacctccgcgcaacagagatgaagatgtactcc
cttgccatcaccccaaacggtcacgtggagggcagggggagcgtaccccctcccatcatc
atgcgcactgctgctactcccatgccaacgcccaagtgctcgccgcacatggattcggtg
cacaccttcgtggactcaaggagagggagcaatgcttcagtggatcccctgagctatgat
caaaagtccttgtccagcctccgcagctcgccatgtgcgaactggggacccaacagcaac
tggggaagccgacgctcaagctggaacagcctcggaagggccccaagcctcaagaagaag
aaccagtctggggaaagagagtccttgctctctggggaggggaaagggagcacggatgat
gactccgatgatgccaagtccagtactgtcagcagagccaccctgcaccgccgggcagag
tccctggattacagaagctccttggacttgcctgagcttctccagctccccaccatgcgc
cactccctcagcatcaaccccctggccgtgctgcccgcagagtaccaggactgcaatggc
aaaatggtgcatgtgcccagtgagttcttcctgcgcatcgacagccacaaggacgacccc
ttggactatgatgacgacatggacgatagttactgctacaggattcgtaaagccctggag
ccctacaaaccggagtggtgcaagaatcacgaagactggtccctctacttgttttctcct
cagaatcggattcgagcgatgtgccagaaggttatagcccacaagatgtttgaccatgtg
gttctggtcttcatctttctcaactgcatcaccattgcactggagaggcccgatattgac
ccccacagcatggagaggatatttctgagtgtctccaattacatcttcactgcaatcttt
gttgttgagatgatggtgaaggtggtggcccttggcttcttctctggggaaaatacctat
ctccaaagcagctggaatgtcctggatggggtcctggtctttgtatccatcattgatatt
atcgtctccatggcgtcagcaggcggggctaagattttgggtatccttcgagtcttaaga
ttgctgcggaccttgaggcctctccgagtcatcagcagagccccaggtctaaaactggtg
gtggagaccttgatatcatccctgaggcctattggaaatattgtgcttatctgctgtgct
ttcttcattatcttcgggatcttaggggttcagctttttaagggcaagttctactactgc
gaaggaccagacaccaaaaacatctccactaaagccgactgcactagcgtgcactacaga
tgggtccggcggaagtacaacttcgacaatttagggcaggctctgatgtccttgtttgta
ctctcatccaaagacggctgggtgaacatcatgtataatggcctggatgctgtgggcatt
gaccagcagcccgtccagaaccacaacccgtggatgcttctctacttcatctccttcctg
ctcatcgtcagctttttcgtgctcaacatgttcgtgggggtggtggtggagaatttccac
aagtgtcggcagcaccaggaggcagaagaggcccgtcggcgggaggagaagcggctgagg
cgcctggagaaaaagcgcaggagtaaggagctatacatgtctgaagcccagcgcagaccc
tactatgctgactattccccgacgcggaggtatatccacaccctctgtaccagccactat
ctggacctcttcattactttcatcattggggtcaatgtcatcactatgtcaatggagcac
tataaccagcccaagaccctggatgaagctctgaagtactgcaactatgtgttcaccatc
gtttttgtgtttgaagctgttctgaagttggtagcatttggttttcgaagattctttaag
gacaggtggaaccagctggacctggccatagttcttctctcaatcatgggcatcacgctg
gaggaaattgaaatgaatgccgcgctgcctatcaatcccacgatcatacgcatcatgcgg
gtgctacgcatagcaagagtgttgaaactgctcaaaatggccacggggatgcgagctctc
ttggacacagtggtgcaggccctaccccaggtagggaaccttggcctactttttatgctc
ctgttttttatctatgctgccctgggagtggagctgtttggaaagctagactgcagcgaa
gacaatccctgcgaaggtctgagccggcacgcaaccttcaccaacttcggcatggccttt
ctcaccctcttcagggtgtccactggagacaactggaatgggattatgaaggacacgctg
cgggagtgcaccaaggaggacaagcactgcctgagttacctgccagtcatctcccccgtc
tacttcgtcacctttgtcctcatcgcccagtttgtcctggtcaatgtggtggtggccgtg
ctgatgaagcacctggaggagagcaacaaggaagccaaggaggatgcagagatggacgca
gagatagagctggaaatgtccagaggagggagcaccccagccaacagtgggggtggaagt
ggcacctctgcctcggacgtcagggccccctacgggagccaggaagccaggaagccagag
tcccccatgcgagtgaagcatcaagccctggaggcactgagctgtgagaatgtgtcttta
gccatcccagactcagacccgctggagggcagagagactccccggatggaaaacacgtcc
ttccgctctgctcctcaccaccatgtcctgacaccttcccacaaaaccccaggctgcgag
tcagaggaaggcgctgcttgcatgagatcaaagagagagcctcagaacttcctaacggtt
cgcaagatctcagtgtcccggatgcactccttgcccaacgacagctacatgttccgccct
gtgatgccagccaaagccccgtaccctctccatgaggtggagatggagacctatgcctgc
aaatcacaaagagggtctgtcacctccatccgttcccaacccgtgggaacatgctcctct
ctgagagtcccaagggagttgcttcaggtgactgctgtatcttctcaccgagacagctgt
gacacatgcaagatcccttctccacagtccacatcacgatctcccagtctcaacaggctg
ctgtgtagacaggaggccattagaacggattcactggatgggcagaatacagattccaag
gacagtctgcaagctgagtccagcgagagcctgcagctgaagaagcagtcccagagcaac
ttaggtgcagctttgttccatcctagcccactctcccagccgggcactcccccgcagtcc
ccaacgtcatcctcacaccatcgacacccgagcgttcgtacccgcaagcacgcttacagc
cagcacagtattccgagcaggccttccagtcaaaatagcaacccagccagccccgagaac
tctctgtttgaatcctcagacctggctgacgaagaagtcagccacataaacagctcggtg
aaagactggcaagagcagccggaaatcagaagccgctcggtctctcctttcatctccccg
gcttcatctctggtccccctcaagaactgcagcacagccagcctggccaggagcaacagc
agagagagagacttgaggaagttttacagtgttgatactaaagggtttctggacaagccc
agctgggcagatgaccaaagaaggcactccattgagatctgcccttccattgacaatgga
gacggtagcttggaacagcccgcggaagggaaggaaaggtctcctgtccacattcagtct
gagtcggagtatatccctggggctcggaggaagaagaagatgagcccaccttgcatttct
atagatcctcccatggaggacgaaagcagcacggcttcacgtaccaaagcctctgagaac
agcatgctgaggagaaggaccccgtcgtgcgaatccaccgcgtacagggactccttggac
atgactgacagtcagcccggggagcaggcctctaaagcagaacggcgggtccagcccccg
tgtcgaggggagcacctgacaatcccaaacttctccttcgagcagtctgaccccagctcc
tcaagcagcctctcagatctccttttggacagtggccaggccatgccctccggcgtggtg
tccgtggactcccggccagatgccacggcgctggaactgaaaaagctggatcacttaaaa
actcagtgcaacaaccctgagaaaaacaaagagcttctaggcgttacgaagagccccaaa
aggcggcacgaactggtccctgtgactgttgcaacagatgaagacatagacaaaccagta
tag
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integrated database retrieval system
