Caretta caretta (Loggerhead turtle): 125643621
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Entry
125643621 CDS
T09292
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125643621 (TP53BP1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
DUF4537
SH3_Hsr9
RTT107_BRCT_5
Tudor_2
Motif
Other DBs
NCBI-GeneID:
125643621
NCBI-ProteinID:
XP_048722542
LinkDB
All DBs
Position
10:complement(282723..355658)
Genome browser
AA seq
1956 aa
AA seq
DB search
MDPSQSQLDLGFSQQDTPCLIVEDSQPESAVIEEDAAHGCISLLALRLPNCKSPVLEMTS
PQGSKLAAGGGGGEDRGLEEKQLTEPMDSSTHQDATGSLSQVIDRLPQPTRKNRVLEMVA
AAAEEAGEDAAHCTTHLLGAEDSGTSQLGFGALELSQSQDFEGDSILSEEGRGHQLQPSG
TVPTCSNPMRNDPNEELHIVRSEALSAGESYTGAQCWQEKSGRSEVMSSSPRIPQQHKET
SRIQMSVCDVLESGLQAEKTPDPGLQESEILSTQEDMFSQSHTTASESDCTITRVEVGGS
VACTPAGTLQLLHLSVQGSLGQESLSTYSSGLITPSPDAFRSHPLIISSSPTEQEETKDE
QMDISAPAEGGDLQEKQKGDEPVDTGSPPEPHVLPQVSTPVSQSAPAFVPGSFPIPSQPE
FSHDIFISTPSLEEKPSGEEKSGVLPSSCLPADVSETTEAPPKIPTGDPEFSCKLVLSAS
ECSQPTKTEGNTSSLKTNQDSENTQVEMDSTLQASELKPCSTESYSVQLRLSEDSQALLS
ENCEKPKREAERATGEPTICPVAEGVAAEGSVAQLACIDLTCDSGSQTAATLSVQSETSA
HTLGQEALTEIKEKLSGEASEFEAVPETLCEEQGGERQAEEKQLNEEGSSDPLTLSRGLI
LVRETQEHEGQEVMEVESSEAFGKNSEKLCDLSHGLVQMDPEIRKKETSKDSNVVAEVKS
MKDLSLKPAPEDVPKLSEVPPQPFVGESLQQQDGSLPQVKVDVAPGLASCTKKCAGSPGN
RSQAEGDLELKQVQKDQQPPPAPLERGDEVPATPQESQQPLLMTLEKAADMPEKPFKTSN
LEQEEERAADQSPCPSSGTLFHFTLPKEGDVIQPLTSVTPSLIGQLKMGPRRHSTPIVDG
SCPDRTIITSDVTAEGSIGTNDVTVESAMASADVLEECEKGDSDAAPEADGKLCLRMNLA
TPVSEESEGSLPFSLEKPAASERKNGSSAVAGAVASSQKTLSVFSRVCEVRREDEARGHD
LPAAPFRGNLFSFPSTQEEEEMHDDPEAWQQCQKHTSCGEIKVSHPTEQDSGHPPSHAKE
GEAMEVDIERDLEKEGKSTQEKLSKALAAQERDKGQQMWAGTSNKEVQTTGGSLLASAAV
SAATQTVTGVSSQIEVGTSMAGQRPGQQDAKVQTEESGEKLVNAPGDDTESLHSQGEEEF
NLPQPPRGHVQHRHMRTIREVRTVVTRIITDVYYVDGAEVERKVIEETEEPIVECQECET
DISPSRTTGGSSLTSGDLGDISSLSSKASSLHRTSSGASSGMSATHGGSSSGRGAGSFKG
KVSGMEAGEFALPSGRGVLGKLSPRKGAGQPGSPLRAGQTGATACEEDEDPAPGIRQGGK
APLTPRGRGRRGRPPSRATGTRDAAGSGLLGVEDLSTTASPEEKPFVRIVVHPPDGGDRF
DAAGPCTLRRSDSPEIPLQVVTGPSDSADLSSGSSFVGLRVVAKWSSNGYFYSGTITQDV
GAGKYKLLFDDGYECDVLGKDILLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGELYY
CIEKEGQRKWYKRMAVILSLEQGNKLREQFGLSPYEPITPLTKAADISLDNLVEGKRKRR
SNFGSPSTSSSSTTPTRKGQESPRVAPGLLSGKRKLVASEDERSPAKRGRKSAAMKPGAV
RAGEFVSPCESGDHTGDPSTLEEHHGPLPHNKTLFLGYAFLLTMATPSDKLAIRQKPSDG
PAGSSEEEEEFSIPYNKQYTALQLRTGAGYILEDFNETQCNAAYQCLLIADQHCRTRKYF
LCLASGIPCVSHVWVRDSCHANQLQNYRNYLLPAGYSLQEQRLLEWHPRENPFGNLKVLL
VSDQQQNFLELWSEILMTGGAASVKQHYLNAQNKDIALGVFDVVVSDSSCPAAVLKCAEV
LRLPVVSQEWVIQSLIAGERVGYNQHPKYKHDYGPC
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagccagagccagctagatttaggcttctctcagcaggacactccctgcttg
atagttgaggactcccagccagagagtgcagtgatcgaggaagacgctgctcatggctgc
atcagcctgctagccctacgtcttcccaactgcaagagcccagtattggagatgaccagc
cctcaaggtagcaaactggctgctggtggtggaggaggagaagacagaggccttgaggaa
aaacagctcacagagcccatggacagttctacccatcaggatgcgacaggttcgctcagc
caagttattgatcgattgcctcagcctaccaggaagaacagggttcttgagatggtagca
gctgctgctgaggaggcaggtgaagatgctgcacactgcactacccacttgctgggtgct
gaagactctggcacatcgcagttgggttttggagctctggaactctcacaaagtcaggac
tttgagggagactcaatattgagtgaagagggcagaggtcaccagcttcagccatcaggc
actgtccctacctgttctaatcccatgaggaatgaccctaatgaggagctgcacatagtt
aggagtgaagctctgtctgctggagaaagttacacaggtgcacagtgctggcaagagaag
tctggaaggtcagaggttatgtctagctctcccagaattccacagcaacacaaagagacc
agcaggatacaaatgtctgtctgtgatgtgcttgaaagtgggttgcaggctgagaagaca
cctgatcctggtctgcaggagtcagagattttgtcaactcaggaagatatgttttcccag
agccacacaacagcttcagagagtgactgtaccataaccagggtggaagtgggaggttcc
gtggcatgcacccctgctggcactctgcaactcctgcatctctctgtgcaggggtccctt
ggtcaggagagtctttccacttattcttcaggcctaattactccttctcctgatgccttt
agatcccatcctcttatcatctccagtagtcccacagaacaggaagaaacaaaagatgag
cagatggatatatctgctccagcagaaggaggagacctacaggagaagcagaaaggagat
gagccagtggacactggcagtccaccagaacctcatgtactaccacaggtttcaactcct
gtatcccagagtgccccagcctttgttcctggatccttccctataccatcacaaccagag
ttttcccatgatatttttatttcaactccgagtctggaggagaagcctagtggagaagag
aagagtggagttttacctagttcatgcttgccagcagatgtctctgaaaccacagaggct
ccaccaaagatccccacaggagatcctgaattttcctgtaagctagtactctctgcaagt
gaatgcagccagcccacaaagacagaaggcaacacaagctctctgaaaaccaaccaagac
agtgaaaacacacaggttgagatggattctacactgcaagcttcagagctgaaaccctgt
tccacagaaagttacagtgtacaactgaggctgagtgaggacagccaagccctgctcagt
gaaaactgtgaaaagccaaaaagggaggctgagcgagctacaggagaacctaccatttgt
cctgttgctgaaggtgtagcagcagaagggtctgtagcacagctggcttgcattgatctc
acatgtgattctggaagtcagacagctgccactctgtctgttcagtctgagacttcagca
cacactctgggtcaagaagcattgactgagatcaaggaaaagttatcaggagaggcgtct
gaatttgaagcagtccctgagactctatgtgaggaacaaggaggagaaaggcaggcagaa
gagaagcagctaaatgaagagggatcctctgaccctctaactctgtctcgggggctgatt
cttgtaagggaaacacaggaacacgaaggccaggaagtgatggaagtggaatccagtgag
gcttttggcaaaaactcagaaaaactatgtgacctgagccatgggttggtacagatggat
ccagagatcaggaaaaaagaaacctctaaagattctaatgtggtcgctgaagttaaaagc
atgaaggatctgtccctgaagcctgctccagaagatgtgccaaagctcagtgaagttccc
cctcagccttttgtgggagagtcgttgcaacagcaggatggctcattgccccaagtaaag
gtggatgttgccccaggattagcatcatgtaccaaaaagtgtgcaggcagtccagggaat
aggagtcaagctgaaggtgacctggaattgaaacaagttcagaaggatcagcagccacct
ccagctcctttagagagaggggatgaagtgccagcaacaccgcaagagagccagcagcca
cttctgatgacgttggagaaggcagcagatatgcctgaaaaaccatttaaaacgagtaat
ctggagcaggaagaggagagggcagctgaccagtccccctgtccatccagtggaaccctg
tttcatttcactttgccaaaggaaggtgatgtcattcagcccttgactagtgtgacccca
tctcttattgggcagcttaaaatgggacccagaagacacagcactcctatcgtggatggc
agctgcccagatagaaccataataaccagcgatgtcacagcagagggcagtattggcacc
aatgatgtcactgtggagagcgctatggcatcagcagatgtgttggaagagtgtgaaaag
ggggattctgatgcagctcctgaggctgatggaaaactgtgtcttcgaatgaaccttgct
acccctgtgagcgaggagagtgaggggagtctgcccttcagtctggaaaagcctgcagcc
agtgaaaggaaaaatggatcctctgctgttgctggagctgttgccagctcacagaagaca
ctgtctgtgtttagtcgtgtctgtgaagtaagacgagaggatgaggccagaggtcatgat
cttcctgctgctccatttagggggaacctgttcagtttcccaagcacacaggaggaggag
gaaatgcatgatgatcctgaagcttggcaacagtgtcagaagcacacctcttgtggggaa
attaaagtttctcatcccacagagcaggactccggacatccgccatcccatgcaaaagag
ggagaggctatggaagttgatattgaaagagatctggaaaaggaagggaagagcacacag
gagaagctgagtaaggctctggcagcccaagagagggataaaggccagcagatgtgggct
ggcaccagtaacaaagaggtccaaactacaggaggttctcttttggcctcagcagctgtg
tcagcagcaacacagacagtgacgggagtgagcagccagatagaagtgggaacgagcatg
gctgggcaaaggcctggccaacaggatgccaaggtccaaactgaggagagtggggagaag
cttgtgaatgcccctggagatgacactgagtctctgcacagccagggagaggaggagttt
aacctgccccagccaccccgaggccatgtccagcatcgccacatgcgaaccatccgtgaa
gtgcgcacagttgtcacacgtatcatcacagatgtttactacgtagatggtgctgaggta
gagcggaaggtcattgaggaaactgaagagcccatagtggagtgccaagagtgtgagaca
gacatctccccctcccgaacaacagggggctcgtcactgacctccggggatctcggtgac
atcagctccctttcatccaaggcctcgagtctccatcgtacatctagtggagccagtagt
ggcatgtcagctacacatggtggcagtagctcagggaggggagctggatctttcaaaggg
aaagtcagcggaatggaagctggagagtttgccttgcccagtggtagaggagtcctagga
aaattgagccctagaaaaggagctggccagccagggtcccctctcagggctggtcagaca
ggagcaacagcatgtgaggaggatgaagacccagcacctggcatccgacagggtgggaaa
gcacctcttacacctcgtgggcgagggagaaggggccgcccaccatctcgagcaactgga
acaagggatgcagctgggagtggcctactaggggtggaagatctctcgactacagcatca
ccagaggagaagccctttgtgcgcattgtggttcacccaccagatggtggggacagattt
gatgctgctggcccttgcactttgcgccgaagtgactctccggaaattcccttgcaggtg
gtgacaggtccctcggacagtgcggacttatcctctgggagcagctttgtgggcctgcga
gtggtagccaagtggtcctcaaatggctacttctattctgggacaatcacccaggatgtt
ggggcagggaagtacaagctgctctttgacgatggatatgagtgtgatgtcttaggcaaa
gatattttactctgcgatcccattccactggaaactgaggtgactgcgctctctgaggat
gagtatttcagtgcaggtgtggtgaagggacaccggaaggagtctggagagctgtattac
tgtattgaaaaggaaggccagaggaaatggtacaagcgtatggcagtaatcctgtccttg
gaacaaggaaacaaacttcgggagcagtttgggctgagtccatatgaaccaatcacaccc
ctgaccaaggcagctgacatcagcctggataacctggtggaggggaagcggaagcggcgc
agtaactttggctcacccagcacttccagcagcagcactacacccactcgaaaaggacag
gagagtccccgtgtcgccccaggcctgctgtctgggaagaggaagctagttgcttctgaa
gatgagagatccccagccaaacgagggcgcaagtctgcagcaatgaaacctggggctgtg
agggcaggtgaatttgtgagcccctgtgaaagtggagatcacacaggagatccctcgaca
ctggaggagcatcatgggccattgccccacaacaagaccctctttctgggctatgctttc
cttctcactatggcaacccccagtgacaaactggctattcgccagaaaccatcagatggt
cctgcaggcagtagtgaggaagaggaagaattctcaattccttacaacaaacagtacaca
gcattgcagctgcgaaccggagccggctacatcctggaggacttcaatgaaacccagtgt
aacgcggcatatcagtgtctcctgattgcagatcagcactgccgaacccggaagtacttc
ctgtgccttgccagtggaattccctgtgtatctcatgtctgggtccgtgacagttgccat
gctaaccagcttcaaaactaccgtaattaccttctcccagctggctacagcctccaagag
caaaggctgctggagtggcatccccgagagaacccctttggtaacctgaaagttcttctg
gtatcagaccaacagcagaacttcctggagctctggtcagaaatcctcatgacaggggga
gcagcatcagttaaacaacattacttgaatgcccagaacaaagatattgctttgggggtg
tttgacgtggtggtgagtgactcgtcctgcccagctgctgtcctgaagtgtgcggaagtg
ttacggctgccagttgtgtcgcaggagtgggttattcagagcctcattgctggggagaga
gttggctacaaccagcatccaaaatataaacatgactatggcccctgctaa
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