Caretta caretta (Loggerhead turtle): 125643650
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Entry
125643650 CDS
T09292
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125643650 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125643650 (MYO5A)
04131 Membrane trafficking [BR:
ccay04131
]
125643650 (MYO5A)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125643650 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125643650 (MYO5A)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125643650 (MYO5A)
mRNA cycle factors
P-body specific factors
125643650 (MYO5A)
Membrane trafficking [BR:
ccay04131
]
Others
Actin-binding proteins
Myosins
125643650 (MYO5A)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125643650 (MYO5A)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125643650 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
Myosin_N
AAA_22
HetR_C
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
125643650
NCBI-ProteinID:
XP_048722609
EnsemblRapid:
ENSCECG00000014200
LinkDB
All DBs
Position
10:complement(23386478..23594890)
Genome browser
AA seq
1827 aa
AA seq
DB search
MAATELYTKYARVWIPDPEEVWKSAELLKDYKEGDKIIQLRLEEGKDLEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGID
DAKEMVHTRQACTLLGINDSYQMGIFRILAGLLHLGNVGFTSRDADSCTIPPKHEPLTIF
CDLMGVEYQEMSHWLCHRKLATASETYIKPISKLQAINARDALAKHIYAKLFNWIVDHVN
KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKLGILDLLDEECKMPKGSDDSWAQKLYNTHLNKCALFEK
PRMSNKAFIIQHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKMLSELFQDEEKALS
PTSATPSGRTLLSRTAVKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
SDRKQTCKNLLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRVACIRIQKTIRGW
LMRKKYLRMKKAAITIQRYVKGYQARCYAKFLRRTRAAIILQKFQRMYVVRKRYRLMRAT
TIVLQSLLRGYIARNKYQGMLREHKAIIIQKHMRGWLARVHYRRSLKAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLNIGMENKIMQLQRKVDEQHKDYKSLLEKLTSLETTYNTE
TEKLRSDVERFRMSEEEAKNATNRVHVLQEEITKLRKELHQTQSEKKTIEEWADKYKQET
EQLLSELKEQNTLLKKEKEELNRRIQDQAKEMTETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLRDEVNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITETEDLPLRM
EQEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRTKTREEEERPPMRG
AELEYESLKRQELESENKKLKNELNELQKALLERSSPEVTAPGAPAYRVLLDQLTSVSEE
LEVRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRL
LESQLQSQKKSHDNELEALRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITRL
TNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPR
KEKDFQGMLEYKKDDEPKLVKNLILDLKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQK
VRSLLTSTINGIKKVLKKRGDDVETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEH
CLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPPGLRK
RTSSIADEGTYTLDSIIRQLNTFHSVMCQHGMDPELIKQVVKQTFYITGAVTLNNLLLRK
DMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAIC
SMCNALTTAQIVKVLNLYTPVNEFEERVSISFIRTIQMRLRDRKDSPQLLMDAKHIFPVT
FPFNPSSLALETIQIPTSLGLAFISRV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaccgagctctacacaaagtatgctagggtttggatccctgatccagaggaa
gtctggaagtcagcagaacttctcaaagattacaaagaaggagataaaatcatccagctt
cgactcgaagagggaaaggatttagaatattgccttgatccaaagaccaaggaactgcct
cccttacgaaaccctgacatacttgttggtgaaaatgatctcacagcactcagttatctc
catgaacctgctgttctacacaacctcaaagttcgctttatagattcaaaactcatttat
acctattgcggtatcgtcttggtagccataaatccttatgagcagctacctatctatggc
gaagatatcatcaatgcatacagtggtcagaatatgggggatatggatccacacatcttt
gctgtggctgaagaagcatataaacagatggccagagatgaacggaatcagtcaatcatt
gtaagtggggaatctggagcaggaaagacagtctctgctaagtatgccatgagatacttt
gccactgtaagtggttctgccagtgaagcgaatgttgaagagaaagtactggcttccaat
cctatcatggagtccatcggaaatgccaaaaccacaaggaatgacaacagtagccgtttt
gggaagtacattgaaattggttttgataagaggtaccgaatcattggtgctaacatgaga
acttacctcttagaaaaatcaagagtggtatttcaggcagaagaggagagaaattatcac
attttctaccagctctgtgcctctgcagcattacctgagtttaaaacactgcgattaggg
aatgcaaattactttcactatacgaagcaagggggtagtccagtgattgacggcattgat
gatgctaaggaaatggtacacaccagacaggcctgcactttgctagggattaatgattcc
taccagatgggaatctttcgaatcctcgctgggctccttcacctaggcaacgtggggttt
acctctcgggatgctgacagctgcacgatccctcccaaacatgaacccctgaccatcttc
tgtgacctcatgggtgtggagtaccaagagatgtcccactggctttgccatcggaagctt
gctactgcctctgagacctacatcaaaccaatttccaaactgcaggccatcaatgccagg
gatgctcttgccaaacatatctacgctaaactctttaactggattgttgatcatgtgaac
aaagctctgcattctactgtaaagcagcattctttcattggcgtattggacatttacggg
tttgagacatttgagataaacagctttgaacagttttgtataaactatgccaatgaaaaa
ctgcagcaacagttcaatatgcatgtctttaagctggaacaagaggaatatatgaaggaa
caaattccatggaccttgatcgatttctatgacaatcagccttgcattaatctcatagag
gccaaattgggcatcttggatctgctagatgaggaatgtaagatgcctaaaggatcagat
gactcttgggcccagaaattgtataatacacatttgaataaatgtgcactcttcgaaaaa
ccacgtatgtcaaacaaagcttttatcatacaacactttgctgacaaggtggaatatcaa
tgtgaaggttttttggaaaagaacaaagacacagtttatgaagaacaaatcaaggtccta
aaatcaagtaagtttaagatgctgtcagagttgtttcaggatgaagagaaggcccttagt
cccacctcagcaaccccttcaggccgcacgctgctgtctcgcactgctgtaaaacccgcc
aaggccagaccaggccaagcaagcaaggaacataagaaaactgtgggacatcagtttcgg
aactctcttcatctgctgatggaaacccttaatgctacaactccacactatgtgcgttgc
attaagcccaatgacttcaagtttccattcacgtttgatgaaaagcgggcagttcagcag
ctcagagcttgtggtgttctggaaactatccggatcagtgcagctggcttcccctcaagg
tggacgtatcaagagttcttcagccgctaccgtgtcctgatgaagcaaaaagatgtcctt
agtgacagaaaacagacatgcaaaaatttgttggagaagctgattctggacaaggataaa
taccagtttggtaagacaaaaatattttttcgggctggtcaagtagcctatctggaaaaa
ataagagcagataagctgagagttgcctgcatccgcatccagaagacaatccgaggatgg
ctgatgcgaaagaagtacctgcgcatgaagaaagcagccatcaccattcagagatatgtt
aaagggtaccaagcacgatgctatgccaagttcttgcgaagaaccagggctgccatcata
cttcagaagttccagcgcatgtatgtggttcgcaaaagataccgtctcatgcgagctacc
actattgttcttcagtcacttttacgaggttacatagccaggaacaaataccaggggatg
cttcgagagcacaaggccattattattcagaaacacatgcggggctggctggctcgtgtg
cactaccgtaggagcttgaaggcaattgtctacctgcaatgctgctacaggcgtatgatg
gccaagagggagctgaagaagctgaagatagaggcacgctctgtggaacggtacaagaag
ctcaatattgggatggagaacaagatcatgcagctgcagcgtaaagttgatgagcagcat
aaagactacaaatccctgctggagaaactaactagcctggaaaccacttacaacacagag
actgagaagctgcggagtgacgtggaaaggtttcgtatgagtgaggaggaggctaagaat
gccaccaatcgtgtgcatgtgctccaagaggagatcaccaagcttcgaaaggagctgcac
caaacacaatctgaaaagaagacaattgaggaatgggcagacaaatacaaacaggaaaca
gagcagttgttatcagaactaaaagaacaaaacacattactgaaaaaggaaaaggaggag
ctgaatcgtcgcatccaggatcaggccaaggagatgaccgagaccatggagaagaagctt
gttgaggaaacgaaacagctggagctagatctgaatgatgaaaggttaagatatcagaat
cttctgaatgagttcagccgcttagaggagcgctatgacgatctcagggatgaggtgaat
ctgatggtgagcatccccaagcctgggcacaaaagaacggattccacacatagtagcaat
gaatctgaatatacatttagctctgagattacagagacagaagacttaccactgagaatg
gagcaggagccaagtgagaaaaaggcaccgctggacatgtctctgttcctcaagctgcag
aaacgggttacagagctggagcaggaaaagcaatccttgcaggatgaactggacaggaaa
gaggaacaggctctccgcaccaagaccagggaggaggaggaaaggcccccaatgagaggc
gcagagctagaatatgagtcactcaagcgtcaagaacttgaatctgagaacaagaagctg
aagaatgagctgaatgagctgcagaaggcccttttggagaggagctctccagaggtgact
gctcctggtgcccctgcctacagagtcctcctggatcagctgacctccgtaagtgaggaa
ctggaggtacgcaaggaagaagtcctcatcctgaggtctcagctggtgagtcagaaggag
gctattcaacccaagaatactatgacagattctacaatcctcttggaggatgtacagaag
atgaaagacaaaggagaaatagcgcaggcatatattgggctaaaggaaacaaacaggctc
ctagaatctcagcttcagtcccagaaaaagagtcacgacaatgagctggaagctctccgg
ggtgagattcagagtctgaaggaggagaataaccgccagcagcagcttttagcacagaac
ttgcagctgcccccagaagctcggattgaggccagtctacagcatgagatcacccggctg
actaatgaaaacttggatttaatggagcagcttgaaaagcaggacaagacagttcgcaag
ctgaaaaagcagctgaaagtgtttgctaaaaagattggtgaacttgaagtgggccagatg
gaaaacatttcgcctgggcaaatcattgatgaacccatacgtccagttaatattccacgg
aaagaaaaggacttccagggaatgttagaatataagaaggatgatgagccaaaactggtc
aagaatcttattttagatctgaaaccacgtggtgtagcagtcaacctgatcccaggacta
ccagcatatatattattcatgtgtgtccgccatgctgattaccttaatgatgatcaaaaa
gtgaggtcattgctgacttccactattaatggcatcaaaaaagtattgaagaaaagaggt
gacgacgttgaaactgtctccttctggctatctaacacctgccgatttttgcactgtttg
aaacagtatagtggagaagagggatttatgaagcacaacacgcctcgtcagaatgaacac
tgcctcaccaattttgacttggctgaatacagacaggtattgagtgacttggctattcag
atctaccagcagctcgtcagagtgttagagaatattctgcagccaatgattgtttcagga
atgctggagcatgaaactattcaaggcgtctcaggggtaaagccaccagggctgcgaaag
agaacgtccagtattgcggatgaagggacctacacgctggactctatcattcgacagctg
aacacattccactctgtaatgtgtcagcatggtatggatccggagttgatcaagcaagtt
gtcaagcaaacgttctacatcactggggcagtaaccctgaataacctcctcttgcgcaag
gacatgtgctcctggagcaaagggatgcagatacggtacaatgtgagtcagcttgaagaa
tggctacgtgacaaaaatttgatgaatagtggggctaaagaaacactggagcctctaatt
caggccgcacagttgttacaggtgaaaaagaagacggatgaagacgcagaagccatttgt
tcaatgtgcaatgctctaactactgctcagattgtaaaagttttgaatttgtatactcca
gttaatgagtttgaagaaagggtctccatatcatttatacgtacgatacagatgcgttta
cgagacaggaaagactctcctcagctgctaatggatgctaaacacatctttcctgttact
tttccatttaatccatcctctcttgcattagaaaccattcagattccaaccagcttgggc
ctagcattcatctcacgtgtctga
DBGET
integrated database retrieval system
