Caretta caretta (Loggerhead turtle): 125643657
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Entry
125643657 CDS
T09292
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04120
Ubiquitin mediated proteolysis
ccay04137
Mitophagy - animal
ccay04144
Endocytosis
ccay04340
Hedgehog signaling pathway
ccay04350
TGF-beta signaling pathway
ccay04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125643657 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125643657 (SMURF1)
04350 TGF-beta signaling pathway
125643657 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125643657 (SMURF1)
04137 Mitophagy - animal
125643657 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
125643657 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125643657 (SMURF1)
04121 Ubiquitin system [BR:
ccay04121
]
125643657 (SMURF1)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125643657 (SMURF1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125643657 (SMURF1)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125643657 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
125643657 (SMURF1)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
HECT type E3
125643657 (SMURF1)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125643657 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
125643657
NCBI-ProteinID:
XP_048722619
LinkDB
All DBs
Position
10:complement(76160095..76218955)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGSGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDTTGAAGGGNCRFVESPSQDQRLQAQRLRNPEVRGHVQTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMNHQCQLKEPSQPLPVPNEGSLEDGEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatccagggacccggagaaacggctccagcatcaaaatccggctcacagtatta
tgtgccaagaatcttgcaaaaaaagatttcttcagacttcctgatccatttgcaaaaata
gtagtagacggatcaggtcagtgccattcaactgacactgtgaagaacacgttagacccc
aagtggaaccagcattatgatctatatgttgggaaaacagattctataaccatcagtgta
tggaatcacaagaaaatacacaagaaacagggagctggcttcctggggtgtgtccgtctc
ctttccaatgccatcagcagactaaaagatactggataccagcgtttggatctatgcaaa
ttaaaccccacagatactgatgcagtacgaggccaaatagtggtcagtttacagacacgg
gacagaataggctcaggaggttctgtggtagattgtagagggctgttggagaacgaagga
acggtttatgaagattctggacctggaaggccactcagctgtttcatggaggaaccagca
ccatatacagatactactggtgctgctggtggagggaattgtaggtttgtggaatcccct
agtcaagatcagaggcttcaggcacagcgacttcgaaaccctgaagtcagaggtcatgta
caaacacctcagaatagaccacatggtcatcagtcacctgacctacctgaaggttacgaa
caaaggacaacggtacagggacaggtttattttttgcacacacagactggagttagtacg
tggcatgaccccaggataccaagagaccttaacagtgtgaattgtgatgaactaggacct
ctgccaccgggttgggaagtgagaagtacagtgtctggaagaatatattttgtagatcac
aataacagaaccacacagttcacagacccaagattacatcacattatgaaccatcaatgc
caactaaaagaaccgagccagcctttgccagtcccaaatgaggggtcattagaagatggt
gaggagttgcctgcacaaagatatgaaagagacttagtacagaaattaaaagtccttaga
catgaactctctcttcagcaaccacaagctggtcactgccgcattgaagtatccagagaa
gaaatatttgaggagtcctaccgtcagataatgaagatgaggccaaaagacttgaaaaag
aggctgatggtgaaatttcgaggagaagaaggcttggattatggtggagtggcaagagag
tggttgtatttactgtgccatgaaatgttgaacccctattatggactcttccagtactct
actgacaatatttacatgctgcaaatcaatccagactcttctatcaatcctgatcactta
tcatatttccattttgttggtcggataatgggtttagctgtgttccatggacactacatc
aatgggggtttcacagttcccttctacaaacagctgctggggaaacccattcagctatct
gatctggaatctgttgacccagaactgcacaagagtttagtttggattttagagaatgac
atcaccccagtgttggaccatactttctgtgtggaacacaatgcttttgggcggattctg
cagcatgagctcaaaccaaatggcagaaatgttcctgttacagaagagaacaagaaagaa
tatgtcaggttgtatgtaaactggcgatttatgagaggaattgaggcacaatttctggct
ctacaaaaaggttttaatgaacttattcctcaacacttactaaagccttttgaccagaag
gagcttgagctaataataggaggcctggataagatagacctgaatgactggaagtcaaac
acacgtctaaagcactgcatggcagatagcaatatcgtaaagtggttttggcaagccgtg
gaaacgtttgatgaggaaagaagggcaaggctgttacagtttgtgactgggtccacacgt
gtccctcttcaaggtttcaaggctttgcaaggttctacaggcgctgcaggacccaggctg
tttaccatccatttgatagatgcaaatacagacaaccttccaaaagcccacacttgcttt
aaccggattgacattccgccttatgagtcatatgagaagctttatgagaagctactgaca
gctgtggaagagacatgtggatttgctgtggagtga
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