Caretta caretta (Loggerhead turtle): 125643743
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Entry
125643743 CDS
T09292
Symbol
IGDCC4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125643743 (IGDCC4)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125643743 (IGDCC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Ig_RIMBP2
Sp38
Ig_C17orf99
SusE
Motif
Other DBs
NCBI-GeneID:
125643743
NCBI-ProteinID:
XP_048722797
LinkDB
All DBs
Position
10:6853944..7041217
Genome browser
AA seq
1283 aa
AA seq
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MALEDLLCLCFFSLTFCVLAVEGKLVQGDSLELSCSAASPKVTLDPSQAVVLDCNLASVE
QLINITWKKNGFPLVEQEHLLVLPNGSLFISSPTAAKESKYPERTGAEGNYSCVSQSSLG
AVASQTTAVRFSSLSRFFQQPESQTVEENGMVRFECRIEGLPSPVITWEKDQAAVPAEPR
FITLPNGILQIVDVQESDAGAYHCVATNAARKRYSNDAILSVLKGSQPAVTRDVTIVAAP
ENTTVVAGESAVMECMASAEPTPFVSWIRQDGKPISMDVIVLGRTNLLIPQAQPHHSGVY
VCRANKPQTRQFVTAAAELSVLAPPSISQSPETISRTRASTARFVCKAEGEPAPVIHWLK
NGEAVLSNGRVKIQSSGSLVINQIGLEDAGYYQCVAENRLGMACATAKLSVIVREGLPSA
PKKVSAVSLSSTTVLVSWERPEYNSEQIIGFSLHYQKAVGTDNVEYQFAVNNDTTELQVK
DLEPNTNYVFYMVAYSQLGASRTSSSIIVRTLEDVPSAAPQLSLSSTTPADIRVTWLPLP
PELSNGKITKYKIDYCTLKEDQISSTEVGANETQITLESLHPNKVYKVRIAASTSAGYGA
PSEWTQHRTPDKDNQTHVPFAPTELKVRAKMESLLVTWQPPANHAQISGYKLYYREVGTE
ESSDENPSDGTEEESWDVGPIKLKKKMKQYELTRLAPGRLYEVKLVAFSKHEDGYAAVWK
GKTEKASATAVDPPVQKGPPLPPAHVYAESNSSTSIWLRWKKPDFTTVKIVNYTVRFSPW
GLKNASLVTYYTSSDEAILISGLKPYTKYEFAVQSNGVGIDGPFGSVVERFTLPDRPSTP
PSDLRLQPINPYAVQVHWCPPVEPNGIIVEYVILYNANNTQPDDMWTLLRKEGNTFSTEV
HGLESDTRYYFKMGAKTIVGSGPYSNVKDVHTLREKRSDVLDTHSVTGIIVGVCLGLLCI
LFCTCASFRSSKQREALPGLDSQASGNHSSYHRGRQGPPGPSAKSDSHELESLMSPLSEE
VPLPLVDITELTEVHSLIHTSLPDDSIHGIRKSTWNKSINQNWASSIARCGDAITKEPTA
AVNGTLKPPSNAGQKLLLQALVYDAVTNEGMKNQPPISLHQVEAEVIVHSDFSASDRDCD
SQLHTLDAEETDPEDHSPENVPSDEQPLQTSPNAKQNVSIAFVDCQGKPELQTQDAMLST
DRKTNKMEAVGPHGLTNGFHKHGESLDFMESGDSDSLQEDRGNVQSVKCQAFPTGQQDAP
LCSISALINSSSASENVTRVHNH
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaggacttgctttgtctctgttttttctctttgaccttctgtgtcctggct
gtggaagggaagctggtgcagggggattctctggagctgagctgcagtgctgcctctcca
aaggtgacattagacccgagccaagccgtggtgctggactgtaacctggcttctgtcgag
cagttgatcaatatcacctggaagaagaatgggttcccattagtggagcaggagcacctt
ctcgtgcttccaaatggatcactcttcatatcgtccccgactgctgctaaggagagtaaa
tatcctgaaaggactggcgcagagggtaattactcctgtgtctcccagagctccctaggc
gcggttgccagtcaaacgactgcagttaggttttcaagtttatcccgtttttttcaacag
ccagagtctcagacagtggaagaaaatggtatggtccgatttgagtgtcggatcgaagga
ctgccctcccctgtcatcacctgggagaaggatcaagcggctgttcctgcagagcccagg
tttataactcttcccaatggcatcctccaaatcgtagatgtgcaggaaagcgacgctggg
gcttatcactgcgtagcgaccaatgcagcacggaaacgctacagtaacgatgctattctt
agcgtcttaaaaggttcccaaccagctgtgactcgagatgttactattgttgctgctccg
gagaacaccacagtggtagctggagagagtgccgtcatggagtgtatggcctctgcagag
cccaccccatttgtctcttggatacgacaggacgggaagcctatttccatggacgtgatt
gtgttaggccggaccaacctcctaattcctcaggcccagccccatcactctggcgtgtac
gtctgtcgggcgaacaaaccccagacccggcagtttgttacagctgcggctgagctcagc
gtcctcgcacctcccagcatctcccagtctcccgaaaccatttcccgcacccgggccagc
actgccaggtttgtgtgcaaagcagaaggggagccagcccccgtcatccactggctgaag
aacggagaggccgtcctgtccaatggccgggtgaaaattcagagcagtggcagcctggtg
atcaaccagatcgggcttgaggacgccggctattaccagtgcgtggcggagaacaggctg
gggatggcgtgtgccacggccaagctctcggtcattgtgcgggagggcttgccaagtgct
cccaagaaggtgtcagccgtctccctgtccagcaccactgtcttagtgtcctgggagcgt
ccagagtacaacagcgagcagatcattggcttttccctgcattatcagaaggccgtggga
actgataatgtagaataccaatttgctgtcaataatgataccactgagcttcaagtgaaa
gacctggaacccaataccaattatgttttctacatggttgcatactcccagctaggagcc
agtcggacgtcctcttccattatcgtgcggaccctggaggatgttcccagtgctgctcct
cagctgtctctgtcaagtacaaccccggccgacatcagagtgacgtggctgcctctccct
ccggagctgagcaatgggaagataacaaaatataaaattgactactgcaccctcaaggaa
gatcagatctcctccaccgaggtgggtgcaaatgagacgcaaatcacccttgagtctctc
catcccaataaagtctacaaagtgcgcattgcggccagcaccagtgcagggtatggggcc
ccgtcggagtggacgcagcaccgtactcctgacaaggacaaccaaacacacgttccattt
gccccgacagaattaaaggtccgagcgaaaatggaatccctcctggtcacttggcaaccc
ccagccaaccacgcccagatttcaggctacaagctgtactaccgggaagtgggcacagaa
gagtcaagtgacgaaaacccctctgatggcacggaagaggagagctgggatgtggggccc
ataaagctaaagaagaaaatgaagcagtatgagttaactcgactagccccagggagactc
tatgaggtgaagctggtggcgttcagtaagcatgaagatggctacgcggctgtatggaag
ggcaaaacagaaaaggcatcagcgacggcagtagaccctccagttcagaagggccccccg
ctgcccccagcccatgtctatgcagagtccaacagttcaacctcaatttggctcaggtgg
aagaaaccagacttcacgactgtcaagatcgtcaattacaccgtgcgtttcagcccttgg
ggactgaaaaatgcctctcttgtcacttactacacaagttctgatgaagctattctcatc
agtggattgaaaccctataccaagtatgagtttgcagtccagtctaatggagttgggatt
gacggaccgttcggcagcgtggtggagaggttcacccttcctgaccggccatcgacgcct
ccatccgacctcaggctgcaaccgatcaacccatatgctgtgcaggtgcattggtgtcct
ccagtcgaacccaatggcatcattgtggagtatgtcatcctgtataatgcaaacaacaca
cagcccgatgacatgtggactctgctgaggaaagaaggaaatactttcagcaccgaggtg
catggcttggagagtgacaccaggtattacttcaagatgggagcaaagaccattgtaggg
tccgggccgtactcgaatgtaaaggacgtgcacacccttcgcgagaagcggtcagatgtt
ctggatacccactcggtcaccgggatcatcgtgggagtctgcttaggtctcctctgcata
ctcttctgtacgtgtgccagtttccgcagcagcaagcagagggaggctctgccaggcctg
gattctcaagcctctgggaatcacagctcctatcaccggggcaggcagggaccgcccggg
cccagcgccaagtctgattctcatgagctggaatcgctcatgtccccgctctctgaagag
gttcccttgcccctggtggacatcacagagctgacggaagtacacagcctcatccacacc
agccttccggatgacagcatccacgggataagaaagtctacatggaataaatcaattaat
cagaactgggctagtagcatagccagatgtggagatgccattacaaaggagcctactgct
gctgtgaatggaacgctgaagccgccttctaatgcaggacaaaagcttttgctacaagcc
ctggtgtacgatgctgttacgaatgaagggatgaaaaatcaaccacccatcagccttcat
caagtggaagccgaggtcattgtccattccgatttctcagcctctgacagagactgcgac
tctcagcttcacacgctggacgctgaagaaacggatcctgaggaccacagcccagaaaat
gtcccctccgatgagcagccccttcaaacctccccaaacgccaagcagaatgtcagcata
gcattcgtggactgccaaggcaaacctgagcttcagacccaggacgccatgttaagtact
gacagaaagactaacaaaatggaagctgtcggccctcatgggctcaccaacggcttccac
aagcacggagaaagtctggactttatggaaagcggggattcggactctcttcaagaagac
agagggaatgtacagtcagtcaagtgccaagcttttcccacaggccagcaggacgcccct
ctgtgtagtatctctgcgctaatcaattcatcctcagcatctgagaacgtgacgcgtgtc
cataaccattaa
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