Caretta caretta (Loggerhead turtle): 125643850
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Entry
125643850 CDS
T09292
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125643850 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125643850 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
125643850 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
125643850
NCBI-ProteinID:
XP_048723026
LinkDB
All DBs
Position
10:complement(28489858..29103983)
Genome browser
AA seq
1024 aa
AA seq
DB search
MVDSLIISLRLLGFIVVLGFQLVIPQTSVEHRKVPQRIEEQSSEDSSAGIPGIWGSWGPW
SACSRSCSGGVMEQTRPCLPSYYHDRGYSRPGQQYPALERTLAPQHSRRHEDPLTPYSGH
VISAIRTSVPLHRNEEQLQSGLWVSVSSTGHNDSHLNRGTLRGSRHSQRHRTKPERRNRN
QSPIGPGKYGYGKVPYILPLQTDTGQLPQKTRRQRQSTRNQAYEQNQGLGNTPNHPPNPS
VQHGNLYQEERGPQVLGPSIYQQAPTHSQAFPASQSLFHGTDSTHHGSASHQPFQGQPHS
PRAGTIVCIGAYKQYKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVKGSQ
KCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTSVCVSGQCKSIGCDDYLGSDKVADKCGI
CGGDNTGCKVVSGVFKHTLTNLGYHKIVEIPEGAIKINITEMSKSNNYLALRSRSGRSII
NGNWAIDRPGRYEGGGTTFTYKRPNEISSTAGESFLADGPTDEILDVYMIHQQPNPGIHY
EYIIPEANVISPQLPPHRRPGELFNGQLELTDGTDHEDENLRRETDTHTGQSTGTFPVIQ
PGRFPSHQPDNQVPAVQPPRRNREHNWKQVGTTECTTSCGKGLRYPIFRCVNRISHEEVS
ESYCDTSTKPTPEEEACNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRTLMV
QQYRCHHLEKPETTSTCQLKICSEWQIQTEWTSCSVPCGVGQRTRDVKCVSNLGDIVDDE
ECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGAGVRTRSVVCMTNHVSSLPLEGC
GNNRPSETIPCDNGPCVGKVEWFAGSWSQCSIECGSGTQQREVICIRKTEGSFDVLNPYE
CSFLERPPSQQSCYLKPCGAKWFNTEWSTCSKSCEGGFRVREVRCLSDDLTPSNQCDPQL
KPEEKESCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVASRQSRF
LGRR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatcatatctttgagacttctcggcttcatagtggtattaggattt
cagctggtcatcccacagacgtcagttgaacacagaaaggttccccagaggatagaagaa
caaagttctgaagacagcagtgcaggaatcccaggcatatggggcagttggggcccctgg
tctgcttgctctcgaagttgcagtggtggggtgatggagcaaacccggccctgcctccca
agctattaccacgacaggggctattctaggccagggcaacagtacccagccttggaaaga
actctcgcaccccagcattcccgccgtcatgaagatccattgaccccttattccggccat
gtcatctctgccatccgtacgtccgtgccacttcacagaaacgaggagcagcttcagagc
ggtctttgggtttcagtttcctctacgggccacaatgacagccatctgaacagaggaacg
ttgagaggcagccggcattctcaaaggcacagaaccaagccagagaggagaaacagaaac
caaagtcccataggcccagggaaatatggatatggaaaagtaccatatatattaccactg
caaactgacactgggcaactgcctcaaaaaacacggaggcaacgacagtcaacaaggaac
caagcatatgagcagaatcagggacttgggaacacacccaatcatccacctaacccttca
gttcaacatgggaatctttaccaagaagaacgtggacctcaggtgttggggccctcaatt
tatcagcaggctccaacccattcacaggcctttcctgcatctcaaagtttgtttcatggg
actgactcaacccaccatggctctgcatcccaccagcccttccaaggtcaacctcactct
ccaagggctggaactattgtgtgcattggagcctacaagcagtacaaactctgcaacaca
aatatgtgtcctgaaagcagcagaaatatcagagaggtacagtgtgcatcatacaacaac
aaaccatttatgggtcgattttatgagtgggaaccttttgcagaagtgaagggaagtcag
aagtgtgaactgaattgccgagcaataggctaccggttctatgtgagacaagctgaaaaa
gtaatagacggcacgccatgtgatcaaaatggaacttcagtctgtgtttctgggcaatgc
aagagcattggctgtgatgactacctgggatcagacaaggtggctgacaaatgcggaata
tgtggaggggacaacactggttgcaaagtggtctctggtgttttcaaacacacgctaaca
aatcttggctaccacaaaatagtagaaattcctgaaggggctattaaaatcaacattact
gagatgtccaagagcaacaactacttggcattgcggagtcgatcaggacggtccatcatc
aatggaaactgggcaattgatcgacccgggagatatgaaggaggagggactacattcaca
tataaacgcccaaatgaaatctcaagcactgcaggggagtcctttttagcagacggtccg
acagatgagatcttggacgtctatatgatacatcagcaacctaacccaggtatacattat
gagtatataattccagaagccaacgtcattagccctcagttgcctcctcacagaagacca
ggggagctattcaatggtcagttagaactgacagatggtacagatcacgaagatgagaat
ttgcgtagggagacagacactcacactggacagtcaacagggacctttcctgttattcag
ccaggaaggtttccttctcatcagccagacaaccaggtccctgctgtgcagccaccacga
cgaaaccgagagcacaactggaaacaggttggaacaactgagtgtaccacttcgtgtggg
aaagggttgcgatacccaatcttccgctgtgtaaatagaatctctcatgaggaggtgtct
gagagctattgtgacaccagcaccaagcctacgccagaagaagaagcctgcaacatcttc
ccgtgcccagccttctgggatataggggagtggtctgagtgcagtaaaacatgtggcctt
ggtatgcagcaccgacaagtcctgtgccgacaagtgtatgccaatcgtacgctgatggtt
cagcaataccgatgccatcacttggagaagccagaaacaaccagcacatgccagctgaag
atttgcagtgaatggcaaattcagacagagtggacttcgtgttcggtgccatgtggagtg
gggcagaggacccgagatgtaaagtgtgtaagcaatcttggagacattgttgatgacgag
gaatgtaatatgaagctacggccaaatgacatagaaaactgtgacatggggccctgtgct
aagagctggttcctcacggagtggagtgacaggtgttctgcggaatgtggtgcaggagtc
cgaacacggtcagtagtttgtatgactaaccatgtcagcagtttgccactggagggctgt
gggaataacagaccctctgaaaccatcccctgtgacaatggaccctgtgtgggtaaagtg
gagtggtttgctggaagctggagtcagtgttcaattgaatgtggcagcggaacccaacag
agagaagtcatttgtattagaaaaacggaaggcagttttgatgtgttgaacccttatgaa
tgttcatttttggaaagaccgcccagccagcagtcctgctacctcaaaccctgtggggct
aagtggtttaatacagagtggagcacatgttccaaatcctgtgaaggaggattccgggtt
cgagaagtgcgatgtctgtcagatgatctgacacccagtaaccaatgtgatccacagctt
aaaccagaagaaaaagaatcttgtaacactcaggattgtataccagaaatagatgaaaat
tgcaaagacaaatactacaactgcaatgtggtggtgcaggcccggctctgtgtctatacc
tattacaagacagcttgttgtgcgtcctgcacaagggtggccagtagacaatcacggttt
ctaggacgcagataa
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integrated database retrieval system
