Caretta caretta (Loggerhead turtle): 125643997
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Entry
125643997 CDS
T09292
Symbol
SNUPN
Name
(RefSeq) snurportin-1 isoform X1
KO
K13151
snurportin-1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125643997 (SNUPN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125643997 (SNUPN)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
125643997 (SNUPN)
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GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
IBB
Motif
Other DBs
NCBI-GeneID:
125643997
NCBI-ProteinID:
XP_048723319
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Position
10:37537753..37550201
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AA seq
389 aa
AA seq
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MVGCPEGLSTKRSLPSRSMRVAGSKMEELNQALASSFAVSQDLNSPAAPHPRLAQYKSKY
SSLEQAERRRRLLELQKSKRLDYVNHARRLAEDDWTGAEEEEEGEDAGNEDMDVDVGKKL
PKRYANQLMLSEWLIDVPPDLEQEWILVMCPMGKRALIVASRGSTAAYTKSGFCVNRFPS
LLPGGNRRNSATGKDYTILDCIYSEVNQTYYILDVMCWRGHPVYDCQTDFRFYWLHSKIQ
EEEGLAEKSRINPFKFVGLQSFPCTPESLCKVLAMDFPFEIDGLLFYHKQTHYSPGSTPL
VGWLRPYMVSDILGMTVPANPLTAKPDYAGHQLQQIIEHKKSKKLAGEEGCLSSKEVADN
GRYELEHLSTPRPAESPNSQVETASQMES
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggtgtcctgaggggctgagtaccaaacgtagtctcccatcgagatccatgaga
gtggcaggtagtaaaatggaggagttgaaccaggcactagcttccagcttcgcagtgtct
caggacctgaacagcccagcagcccctcacccccgactggcacagtacaagtccaagtac
agttccttggagcaggcagagaggagacggcggcttctggaacttcagaaatctaagcga
ttggactatgtgaaccatgccaggagactggcagaggatgactggactggagctgaggag
gaggaggaaggtgaagatgcaggcaatgaggatatggacgttgacgtgggcaagaagttg
ccaaaacgctatgctaaccaactaatgctatccgagtggctgattgatgtccctccagat
ctggaacaagaatggatcctggtgatgtgtcccatggggaaaagggcactgattgtggca
tccaggggctccactgcagcttacaccaagagtggattttgtgtcaacaggttcccctcc
ctcttgccagggggaaacaggcgcaattcggcaactgggaaagactacacgatcttggac
tgtatctacagcgaagtgaaccagacgtactacatccttgatgtgatgtgttggaggggg
catcctgtttatgactgtcagacagatttccgattctattggcttcattctaagatacaa
gaagaggaagggctggcagagaaaagcagaattaatccatttaaatttgtgggcctgcag
agtttcccctgcactccagagagcctatgcaaggtgctggccatggacttcccctttgag
atagatgggctcctcttctaccacaaacaaacacactacagccctggcagcaccccactg
gtgggctggctccgaccctacatggtatcagacatccttgggatgactgtgccagctaat
ccactaactgccaaaccagactacgccgggcaccagctccagcagatcattgagcataag
aagagtaaaaagctggcaggagaggagggatgcttgagctccaaggaggtggctgacaac
ggacgttacgagttggaacacttgtctacccctcgtccagcagaatctcccaacagccaa
gtcgagacagcaagccagatggagagctag
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