KEGG   Caretta caretta (Loggerhead turtle): 125643997
Entry
125643997         CDS       T09292                                 
Symbol
SNUPN
Name
(RefSeq) snurportin-1 isoform X1
  KO
K13151  snurportin-1
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125643997 (SNUPN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccay03041]
    125643997 (SNUPN)
Spliceosome [BR:ccay03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    125643997 (SNUPN)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme IBB
Other DBs
NCBI-GeneID: 125643997
NCBI-ProteinID: XP_048723319
LinkDB
Position
10:37537753..37550201
AA seq 389 aa
MVGCPEGLSTKRSLPSRSMRVAGSKMEELNQALASSFAVSQDLNSPAAPHPRLAQYKSKY
SSLEQAERRRRLLELQKSKRLDYVNHARRLAEDDWTGAEEEEEGEDAGNEDMDVDVGKKL
PKRYANQLMLSEWLIDVPPDLEQEWILVMCPMGKRALIVASRGSTAAYTKSGFCVNRFPS
LLPGGNRRNSATGKDYTILDCIYSEVNQTYYILDVMCWRGHPVYDCQTDFRFYWLHSKIQ
EEEGLAEKSRINPFKFVGLQSFPCTPESLCKVLAMDFPFEIDGLLFYHKQTHYSPGSTPL
VGWLRPYMVSDILGMTVPANPLTAKPDYAGHQLQQIIEHKKSKKLAGEEGCLSSKEVADN
GRYELEHLSTPRPAESPNSQVETASQMES
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggtcgggtgtcctgaggggctgagtaccaaacgtagtctcccatcgagatccatgaga
gtggcaggtagtaaaatggaggagttgaaccaggcactagcttccagcttcgcagtgtct
caggacctgaacagcccagcagcccctcacccccgactggcacagtacaagtccaagtac
agttccttggagcaggcagagaggagacggcggcttctggaacttcagaaatctaagcga
ttggactatgtgaaccatgccaggagactggcagaggatgactggactggagctgaggag
gaggaggaaggtgaagatgcaggcaatgaggatatggacgttgacgtgggcaagaagttg
ccaaaacgctatgctaaccaactaatgctatccgagtggctgattgatgtccctccagat
ctggaacaagaatggatcctggtgatgtgtcccatggggaaaagggcactgattgtggca
tccaggggctccactgcagcttacaccaagagtggattttgtgtcaacaggttcccctcc
ctcttgccagggggaaacaggcgcaattcggcaactgggaaagactacacgatcttggac
tgtatctacagcgaagtgaaccagacgtactacatccttgatgtgatgtgttggaggggg
catcctgtttatgactgtcagacagatttccgattctattggcttcattctaagatacaa
gaagaggaagggctggcagagaaaagcagaattaatccatttaaatttgtgggcctgcag
agtttcccctgcactccagagagcctatgcaaggtgctggccatggacttcccctttgag
atagatgggctcctcttctaccacaaacaaacacactacagccctggcagcaccccactg
gtgggctggctccgaccctacatggtatcagacatccttgggatgactgtgccagctaat
ccactaactgccaaaccagactacgccgggcaccagctccagcagatcattgagcataag
aagagtaaaaagctggcaggagaggagggatgcttgagctccaaggaggtggctgacaac
ggacgttacgagttggaacacttgtctacccctcgtccagcagaatctcccaacagccaa
gtcgagacagcaagccagatggagagctag

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