Caretta caretta (Loggerhead turtle): 125644012
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Entry
125644012 CDS
T09292
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125644012 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125644012 (DIS3L)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
125644012 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
Rrp44_CSD1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
125644012
NCBI-ProteinID:
XP_048723347
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All DBs
Position
10:complement(6080893..6110496)
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AA seq
1050 aa
AA seq
DB search
MQRTEKVLQLRGLQGRSVRVVREHYLRPDVPCRSALCQAACPRDGKLLSDDVTHYVVPDW
KIVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLVKDARHDCILFANEFQQ
YCYLPRERGESMEKWQTRSIYNAAVWYYNHCLGQLPVVMVTEDEDAIREYGGETEGVFVI
LFKNYLDNFWPDLKAVHELYDSILQSRRERESESQENNGKEYPEHLPMEILEAGIKSGRY
IQGVLNVNKHRAQMEAFVRLQGASGKETDLQSDILIHGTKARNRAIHGDVVAVELLLRHE
WKGRTASLCENDTEEKAPGDTSSEPMPTGRVVGIIQKNWRDYVVTFPSKEESQSQGKNAQ
KILVTPWDYRIPKIRISTQQAEALQDCRVIVRIDSWESTSVYPNGHFVRVLGRIGDLEGE
TAVILVENGISVAPFSEAQTCEMPSSTSENPWKVNPEEELKRTDLRNTHLVFSIDPKGCE
DVDDALSIRTLANGNLELGVHIADVTHFVAVNSYTDIEARARATTCYLADRRYDMLPSIL
SADLCSLLSRVERYAVSVMWELDKNSYEILRVWYNRTIIQSSYKLVYEVAQGLLDGDLSV
VDDILELKELDERTRQQKLEELVWAIGKLTDIARHVRAKRDSCGALELEGVEVRVQLDDK
KNIHDLIPKQPLEVHETVAECMILANHWVAKMIWENFPHQALLRQHPPPRQEFFSELREC
ASAKGFSIDTRSNKALADSLSKADDPLDPTVNKLLRSMATQAMSNALYFSTGSCPEEEFH
HYGLALDKYTHFTSPIRRYADIVVHRLLMAATLKDTEVDVTVNLFSNKDLEELCRHINNR
NRAAQHAQKQSTELFQCMYFKDKVPETEERCTADGVIYSIRTNGVLVFVPRYGIKGAAYL
KNKEGLVISCQSDGSCVWKPGSLQRFQNRITSTTVAGESFTLSLFDHITVKVSVQSSRCH
PDTIKLEIISNIPYKNTATELYQKNFHIMKTDLVKEVTRSAEEALLAQEKNRVEVIQEEH
QEYCQTKGVSLYQLLEEIRDLALLDVSAGN
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcacggagaaggtgctgcagctgcggggcctgcagggccgctcggtgcgcgtc
gtgcgggagcactacctgcgccccgacgtgccctgccgcagcgccctgtgccaggccgcc
tgcccccgcgatgggaaattgttgtcagatgatgtgactcattatgttgtccctgactgg
aagattgttcaagattaccttgagattcttgagtttccagagctgaagggtattatcttc
atgcaaacagcatgtcaagctgtccagcatcaaaggggtcgcagacagtacaacaaattg
cgaaatctagtgaaggatgcccgccatgactgtattctgtttgctaatgaattccagcag
tattgttatctgccaagagagaggggagaatcaatggagaaatggcagaccaggagtatt
tacaatgcagcagtatggtattataatcactgcttgggtcagctgccggttgttatggta
acagaagatgaagatgctatccgagaatatggaggtgaaacggaaggagtgtttgtgatt
ttattcaagaattacttggataatttttggcctgacttaaaagctgtccatgaactctac
gattctatacttcaatctcggcgtgaacgagagtctgaaagccaagaaaacaatgggaag
gaataccctgaacatcttcctatggaaatattggaggctgggatcaaatctggaagatat
atacagggtgtcctgaatgtcaataagcacagagcacaaatggaagcttttgttcgactt
caaggagccagtggtaaagaaacagatctccaaagtgatatacttattcatggtaccaaa
gctcggaaccgtgcaatccatggtgatgtagtagctgtagagttgttactccggcatgaa
tggaaaggaagaactgcttctctttgtgagaatgatactgaagaaaaggcaccaggagac
acctccagtgaacctatgcccacaggtagagttgttggaatcattcagaagaattggcga
gattatgtggtcacttttccatccaaagaagagagtcaatctcagggtaaaaatgcccag
aaaatccttgttacaccttgggattacagaattcctaaaatcaggatcagcacacagcag
gctgaggcactacaggactgtcgagttattgtgcgtattgattcttgggagtcaacgtct
gtgtatccaaatggacattttgtacgagttttaggacggataggagatctcgaaggggaa
actgcagttattctagtggagaatggcatttctgttgcccctttctcagaagcccagacg
tgtgagatgccttccagtacctcagagaatccatggaaggtgaatccagaggaggaacta
aaacgcactgacttgaggaatacgcatttagtatttagcattgaccccaaaggctgtgaa
gatgtggatgatgcattgtccattcggacactagccaatgggaacctagagctaggtgtc
catattgcagatgtaacccattttgtggcagtaaattcttacactgacattgaggccaga
gcaagggcaacaacctgttatttagctgatcgtcgttatgatatgctgccttccatcctg
agtgctgatttatgctctcttcttagcagagttgaaaggtatgctgtcagtgtcatgtgg
gagctagataaaaattcctatgaaatcctgagagtctggtacaacagaaccatcattcag
tcttcgtacaaactggtctacgaggtagctcaaggattattagatggtgacctaagtgtt
gttgatgatatcctagaactcaaagaactggatgagagaactagacaacagaagctggaa
gaattggtctgggcaataggaaaactgactgatatagctcgacatgttcgggctaaacgt
gacagctgtggtgctctagagctggaaggagtagaagtaagagtgcagctggatgataaa
aagaacattcatgatctcatccctaaacagccactggaggtgcatgagactgttgctgaa
tgtatgatccttgccaaccactgggtggcaaagatgatttgggagaactttcctcaccag
gctttgctgcgccaacaccctccaccacgacaagagtttttttctgagctccgagaatgc
gccagtgccaaaggcttttccatagacacacggtctaataaagcactggctgattctctg
agtaaagcagatgatcccttagatccaactgtgaataaattactgcggtccatggctact
caggcaatgtctaatgcactgtacttctcgactggctcatgccccgaagaagagttccat
cattatggacttgccctagataaatatacccattttacttctccaattagaagatatgct
gatattgtcgtccacagactgctaatggctgccactttaaaagacactgaagtagatgtt
acggttaatttgttcagcaacaaagatcttgaggaattgtgtagacacatcaacaacaga
aacagggctgcacaacatgcccagaaacagtctactgagcttttccagtgtatgtatttc
aaagacaaagtccctgaaacagaagagcgctgtacagcagatggtgttatttactccatt
cgaacaaatggtgtacttgtttttgtaccaaggtatggcattaaaggtgctgcttatctg
aaaaacaaggagggtttggtcatctcctgtcagtctgatggcagttgtgtgtggaaacct
ggttctcttcagcgttttcagaacagaattacttccactacagttgctggagaatctttt
acattgagtctgtttgaccatataacagtaaaagtatctgtgcagagttcacgctgccat
cctgacaccatcaagcttgaaataattagcaacataccttacaagaatacagccacagag
ctttaccagaagaatttccacataatgaaaactgacttagtaaaagaagtaaccagatct
gcagaggaagctctacttgcccaagaaaaaaacagagttgaagtaattcaagaagaacat
caggagtattgccaaacaaagggagttagcttgtaccaactgcttgaggaaattagggac
ttggctctactagatgtatcagctggtaactga
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