Caretta caretta (Loggerhead turtle): 125644059 Help Entry 125644059         CDS       T09292                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism ccay  Caretta caretta (Loggerhead turtle) Brite KEGG Orthology (KO) [BR:ccay00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ccay03400]     125644059 (SPG11) DNA repair and recombination proteins [BR:ccay03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      125644059 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C S6PP_C CNP_C_terminal Motif Other DBs NCBI-GeneID:  125644059 NCBI-ProteinID:  XP_048723409 LinkDB All DBs Position 10:complement(2315455..2379930) Genome browser AA seq 2458 aa AA seqDB search MAAPWSRPAEAGSSVWGKLAGGPRRMEGAKGELRVLLVPLAQEARSPPGDTAQVKLNRAQ DALGSRLVSGGLHLRSLACGRAGRARGSPVPGPWADFMWEDAENNDPQGNKSKLLALSKN NELFVYELNREDGKSDTAPLYSWNEERLKKLLEVKNISLSSISSVRILSFKKSTSLLLLN NFILVHLDFPGEDTELQALDCFILDLSPQALERITDVNFCRGVLFLLDNSGWIYIFDTID GVHLADVDVALFQANVQDENKNTTIISPLTSVKVSHDLNVAVIVNSSNCAISIDLNLYFR EFPGHLFCKKIFQNLPVTRLEGIDEDDLASSDYSMKFMRFSFRTDRSWKAHLSSLCNTSK RADSPDLVSNICLRWYQYLPHLEHYDYKICETSEKILSSIPQDIVYILSESTKKDYANIN DIGRQWKKIHPGGLEEMMKLECKSVTGFSALFALSAGDKGLTVALWDLETQDVTYYHIGK NCIYVDCSGEEQLCVIQTEHGLSLILFGLTQEEFLNRLIIHGSAGIVDSLCHLNGWGRCS IPIHALEAGLENRQLDTVDFFLKSKENLFNLTSACSLPEQSTNITPQFYLRSVEELKPAL DLLCSAIRENDLEAQSKHFSEQLLNLTLAFLNKQIREIFIHTKELDECLQKCVDILTTYI IELRTFMIKFPRKQTNLINIRCDFDEDIPRTEQSQMWETLTPEQVIFEAILNNRIPEAQT FFRVNQNPAQSLQELIQIGFELVYDSLLKGNVKEASELIRNMGFDVKEQLHKICFYTIDK NIRNLLVKVLQEQNYFSEKEKRVIAFVHQVENFYSGSFQDNKEIQPLSSFRNWKKEQDLS SHTAVLDTFLTCDKPQIHNREHRIMLNWGQWWDQDIQEMILLPKRSHEEFKSCNPAVLWM YLTSQHDWLNICSWIEESQPHSHTLFQQANWPSLTPDIIDQNTFCSSYMRNEILDKLARN GIFVPSEQDDFEFLLLRLSHIGGVMQNPHPVPKYSSASGLDFHTHFILYCLERSLQHLLY TYLDYYSLTPSNCPVLDKKELHEAHPWFEFLVQCRGVASNPRDPKMIFQASLANAQILIP SNQASVSSMLLEGHTLLALATTMYAPGGIDQVLQNEDTEKPLKKVDPQLLKMALTPYPKL KAALFPQNTSHGILPPDISLYHLMQSLAPFDPTKLFGWQSSNTLAIADISSDLPHFSSPD LVNKYAIMERLDFSYYLHHGRPSFAFGTFLVQQLVKSKSPKQLIQQAGNEAYALALSFFY IPSIGAACICFLELLGLDSLKLRVDIKVADIIWSFKSRNEDSQHNLIREALVGNLTKLAD GEKAAAAEVLISLEEAFWDKIEHQEIKKTSSDSRRQWSLVMQFCKLHDIKLSTSYLKECA RSNDWLQFLIQTQMYSYQIDEVISILQDFTPILQEHLMLAFENLQHSRSDTGSHHNNNTS PLKIEHRQSEHTSDLFQILLCCQESPNPGCYLLAEGVRHHAPFLSVLAACFQDPNIIHCL CVWIITSVDNVTAAEATNHIQGSVENHEWDLHDLSTIWKMFLRRQKNKTLMNGFRLFLKD SPLLHILEMYELCMDYKKYNEAKTKLHNFQTSLANLKIADKPTPSIISVPWLESQAFFLL ELMMQQCRTQYELGKLLQLFADIDKLLPDGPDVKKLCALSQILKDSSISINRSILTSYDT EYFQNECRSVLEQLQERGLFSLARKVAELAELPVDSVVIQEVLQDLHLLEHIGPWHQKQT RINFWKKCHDRFMRNSVSSKAASAFFLAEANAVSEPSADEKVNSIMEKHLLLTLAGHWLA QSDSVTLDKLEEIEKQIWLCCIAQQTLNRDDVLVKSRFSHQVSASGELSFDSLAKEFSFS KLTALNTSKYLQLDGLAFQDMSENILDKAEVESLRFLIGRLLDEGSIHEASRVCRYFHFY SRDVSLVLHCRALASGEADLNSLHPDIRAILLVGDTADERDTQPRRLQSTSSIENWSHVL APSPDDLVMTSLTTLIDECVHGRNYCRQVLCLYELSKELNCSYGEISAHDSEKVLRAILS SQQPDRCKKAQMFIKTQGLQSETVAELVAEEIMQELLVSSERKGQKQIVNPADETQAFLE LAKLCKDHTLVGMKLLDKISSVPCGELSCTTELLILAHNCFSLTCHMEGIIRVLQTARLL TEAHLAPNEEFGLVVRLLTGIGRYNEMTYIFDLLHEKHYFEVLMRKKLDPSGTLKTALLD YIKRCRPGDSEKHNMIALCFSMCREIGENHEAAACIQLKLIESQPWEESLRDVPNLKKLL MKALTLFIDAAESYSKDSCIRQSLRCNRLTKLITLQLHFLNTNQSTMLINLNRQNLMDCI MSLPRFYQVAIVSEAYDFVPDWAEVLYQQVIIKGDFNYLEEFKQQRLLKSNVFEEIAKKV KQHQPTETAQKNLKTLLTYCEDIYLYYKLAYDNKFYDVVNMLLKDAQTGCCLKDMLAN NT seq 7377 nt NT seq  +upstreamnt  +downstreamnt atggccgcgccctggtcgcgcccggctgaagccggaagttcggtctgggggaagctggct ggcggcccccggaggatggagggggcgaagggggagctgcgggtgctgctggtgcccctc gcccaggaggcccggagccccccgggcgacacagcccaggtcaagctcaacagggcgcag gacgctctgggaagccggctggtctcgggggggctccacctcaggtccctggcctgcggc agggccggccgggcccgcggcagccccgtccctggaccgtgggcggacttcatgtgggag gatgcagaaaataatgatccacaaggaaacaagtcaaaactcctggctcttagtaaaaac aatgaactgtttgtctatgagctcaatagagaggatggaaaatctgacacagctcccttg tacagctggaatgaagagagacttaaaaaacttctggaagttaaaaatattagtctttct tcaatatcgtctgtgaggattctgtcatttaaaaagagcacatctttgctgctgttgaat aattttattcttgtgcaccttgattttcctggagaagatacagaattacaggcacttgac tgctttatccttgatttgtctccacaagctttggaaagaataacagatgtgaacttttgt agaggggttctatttttgttagataactctggttggatatacatatttgatacaatagat ggtgtgcatctagcagatgttgatgttgcactcttccaagcaaacgtgcaggatgagaac aagaatacaaccatcatatctcccctcacttcggtaaaggtgtcgcacgatctcaatgtc gctgtgatcgttaattcctctaattgtgccatttctattgatctaaatttgtatttcaga gaattccctgggcatttattttgtaagaaaatttttcagaatcttcctgtgacacgactg gaaggaattgatgaggatgacctagccagctctgactacagcatgaaatttatgaggttt tctttccggacagacaggtcatggaaagcacacttgtcctcattatgcaacacgtcaaag agagctgactctccagatttggtatctaacatttgcttacgttggtaccagtaccttccc catcttgaacattatgattataaaatctgtgagacgtctgagaagatcttgtcctccatt ccacaagacattgtctatatcctttccgaatcaacaaagaaagattatgcaaatatcaat gacataggaagacaatggaaaaaaatccatccaggaggactagaagaaatgatgaaactt gagtgtaaatctgtgacaggatttagtgcactgtttgcattatcagctggtgacaaagga ttgactgttgctctgtgggatttagagacgcaagatgtgacatattatcacattggcaaa aactgtatttatgtggattgcagtggagaggagcagttgtgtgtcattcagacagagcat ggactctccttgattctgtttggtttaactcaagaggaattcttgaatagactgataatc catggaagtgctggcattgtagattctctttgtcatctcaatgggtggggaagatgttcg attcccatacatgcattagaggctggtttggagaaccgtcagctagacacagtagacttc tttttaaagagcaaagagaatcttttcaatcttacttcagcctgttccttaccagagcaa tctaccaatatcacaccccaattttacttgagaagtgtggaagaactgaagccagcttta gatttactttgctcagcaatcagagaaaatgatttggaagctcagagtaaacacttctct gagcagctgctaaaccttactttggcttttcttaacaaacaaatcagagagatttttatt cacacaaaagaactcgatgagtgcttgcagaagtgtgtggatattttaaccacctacatt atcgaacttagaacatttatgataaagtttcctcgaaagcagacaaatctcataaatata agatgtgattttgatgaagacattcccagaacagaacaaagccaaatgtgggaaacactc actccggagcaagttatttttgaggccattttaaacaacagaataccagaggctcagacg ttcttccgagtgaatcagaaccctgctcagagtcttcaagagctgattcaaataggtttt gaacttgtttatgacagtcttctaaagggcaatgtcaaagaggcctcagaactcataagg aatatgggttttgatgtgaaagagcagttgcataagatatgtttctacactattgataaa aacatacgcaacttgttggtgaaagtgttgcaagaacaaaactatttttctgaaaaagag aagagagtgatagcctttgtgcatcaggttgaaaacttttattcgggatccttccaagac aataaagagattcagcctctttccagtttcaggaattggaaaaaagaacaagatctgtcc agtcacacagctgttttggatacattcttgacttgtgacaaacctcagattcacaacagg gagcacagaattatgttaaactggggtcagtggtgggatcaggatattcaggaaatgatt cttcttcccaaaagatcacatgaagaattcaagtcctgtaatcctgcggttctttggatg tatctgacatcccagcatgactggcttaacatttgctcatggattgaagaatcccagcca catagtcataccttatttcaacaagctaactggccttctctgacaccagatattattgac caaaatacattctgcagcagctatatgagaaatgaaatattagacaagctggctagaaat ggaatttttgtcccatctgaacaagacgactttgaattcctcctcctaagattgagccat attggaggagtgatgcaaaatccacatcctgttccaaaatacagttctgcgagtggtttg gatttccacacccatttcatcctctattgtttagaacgtagtctgcagcatctgctatac acatatttagactattacagtttaactccttcgaattgtcctgttttggataaaaaggaa ttgcatgaggctcacccctggtttgaatttctagtgcagtgtcgaggggttgccagtaac ccaagagatccaaagatgatatttcaggctagtcttgcaaatgctcagatcttgattcct agtaatcaagctagtgtgagcagcatgctgttggaaggacatacacttttagcacttgca accacaatgtatgcacctggcggtatagatcaggttcttcagaatgaagatactgaaaag cccctgaagaaggtggatccacagctgttaaaaatggcattgacgccttaccccaaactc aaagctgctctctttccgcagaacacttctcatggaattttgccacctgatatctcactc taccatcttatgcagtcattagcgccttttgatcccactaaattatttggctggcagtcg tcaaatactcttgccatagcagacatctcaagtgacctccctcatttctcgtcccctgat ttggtaaacaaatatgccataatggaacgactggatttttcctactacttgcaccatgga cgcccatcatttgcttttggtacctttttggtccagcaattagtaaagagcaaatcccca aagcagctgattcagcaagcagggaatgaagcctacgctctagctctttctttcttttat ataccttcaataggagcagcatgcatttgttttctagagttacttggtcttgacagcctt aaacttcgggttgatattaaagttgcagatataatttggagcttcaagtctagaaatgaa gactctcaacacaatttaataagagaagccttggttggaaatctaacaaaattggcggat ggtgaaaaagcagcagcagcagaagtgctaatctccttggaagaagctttttgggataaa atcgaacatcaagaaataaagaaaacatccagtgactctagaagacagtggtctttggtg atgcagttctgtaagctccatgatatcaaactgagtacatcttacctaaaggaatgtgct agatccaatgactggctgcagtttctcatccagacccagatgtacagctaccaaatagat gaggtcatttccattcttcaagatttcactcccattttgcaagaacatttgatgctggcc tttgagaacttgcagcactctcgctctgatacagggagtcatcacaacaacaacaccagt ccactcaagattgagcacaggcagagtgaacatacaagtgacctctttcaaattctgttg tgctgtcaagaaagtcctaaccctgggtgctaccttttggctgaaggagtgaggcaccat gctcccttcttgagtgtcttagcagcctgttttcaggatcccaacattattcactgtctc tgtgtttggataattacctctgtggataatgttactgctgctgaagcaacaaaccatatt caaggctcagtagaaaatcatgaatgggatcttcatgacctttccaccatctggaagatg tttttaagaagacaaaaaaataaaactctcatgaatggtttccggctctttctcaaggat tcccctttattacatatactggagatgtatgaactgtgcatggactacaaaaaatataat gaagccaaaaccaaactccacaacttccagacaagtcttgcaaatcttaaaattgcagat aaaccaacaccgtcaataatatcagtaccatggctggagtcacaggcattctttcttctt gaattgatgatgcagcaatgtagaacacagtatgaattaggaaaactgttacagctcttt gcagatatagataaacttctacctgatggcccagatgtgaagaaactgtgtgcactcagt cagattttgaaggattcatctatatctattaatcgctctatcctgaccagttatgacaca gaatattttcagaatgaatgcagatcagttctagagcagctgcaagagagaggattgttc tcactggcgaggaaggttgcagaattagctgaactgcctgtggacagtgtggttatccaa gaggtacttcaagatttacatctcttagagcacattggaccgtggcatcaaaaacaaact agaattaacttctggaaaaaatgtcatgaccgttttatgagaaattccgtctccagcaaa gcagcatctgcctttttcttagcggaggcaaacgcagtgtctgaaccttcagctgatgag aaggtaaacagcattatggagaaacacctgctgcttaccttggctggccactggctagca cagagtgactctgtgaccctggacaaattggaagaaatagagaaacagatctggctttgt tgcattgcacaacaaaccttaaatagagacgatgtgttggtcaagtcaagattttctcac caggtttcagcgagtggtgaactttcctttgatagcttagctaaggagttttccttttca aagctaactgctctgaatacatcaaaatatttacaacttgatggccttgcattccaagat atgtctgaaaacattctggataaagctgaggtagaatcacttcgctttctgattggacgt cttctagatgaaggaagcatacacgaagccagccgtgtttgccggtattttcacttttat agcagagatgtttctttggtattgcactgcagagcactggcctcaggggaggctgatcta aacagcttacacccagatattcgagctattcttctggtgggagatacagcagatgagaga gacacgcagcccagaagattacaaagcacctcaagcatagaaaattggtcacatgtcctg gctccatctccagatgatctggtaatgaccagtctgacgactctaatagatgagtgtgtt catgggagaaactactgcagacaagtcctctgtttgtatgagctttcgaaggaactgaat tgctcctacggtgaaatatcagcccatgattctgaaaaagtgcttcgagcgatcctttca tcgcagcagcctgacagatgcaagaaagcccagatgttcatcaaaacacagggtctccag tctgaaactgtggcagaacttgtggctgaagaaatcatgcaggagttactggtatcttct gaaagaaaagggcaaaagcagattgtgaatccagcagatgagactcaagcattcctagag ttggccaaattgtgcaaggatcatacactggttggcatgaagttattggataaaatttca tctgtaccctgtggggaactatcttgcactacagagctgctgattttggcccataattgc tttagtctgacatgtcacatggaaggaattattagagtcctgcaaactgctcgacttctc actgaggcacacttggcccctaatgaggagttcggccttgtggtccgactccttactggt attggaagatataatgaaatgacgtacatattcgatctgctgcatgagaaacattacttt gaagtgcttatgagaaaaaagttggacccgagtggaacgctgaagacagctctgctagat tacataaagcgctgtcggccaggggacagtgaaaagcacaatatgatagccctgtgcttt agcatgtgtcgagaaattggagagaatcatgaggcagctgcttgtatacagcttaagctc attgaatctcaaccatgggaagagtctctcagagatgtgcctaacttaaagaaactgttg atgaaagctctgacactctttattgatgcagccgaaagttattctaaggattcctgtatc cgccagtccttgcgctgcaaccggttgacaaagctgataaccctccagcttcattttctg aacacgaatcagagcacgatgttgattaacctgaacagacagaacctgatggattgcatc atgtccctgcccagattctaccaggttgctattgtgtctgaggcttatgactttgttcca gactgggctgaagttctgtatcaacaagtgattataaagggcgacttcaattacctggaa gaatttaagcaacaaaggttactcaaatccaatgtatttgaggagattgcgaagaaggtc aaacagcaccagccaactgagactgctcagaaaaatctgaagacgttactgacctactgt gaagacatctacctgtactacaaattggcgtatgataacaagttttatgatgtggtaaat atgcttttgaaggatgcgcagactggctgctgtctaaaggatatgctggcaaattag

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