Caretta caretta (Loggerhead turtle): 125644096
Help
Entry
125644096 CDS
T09292
Symbol
MYO5C
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125644096 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125644096 (MYO5C)
04131 Membrane trafficking [BR:
ccay04131
]
125644096 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125644096 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125644096 (MYO5C)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125644096 (MYO5C)
mRNA cycle factors
P-body specific factors
125644096 (MYO5C)
Membrane trafficking [BR:
ccay04131
]
Others
Actin-binding proteins
Myosins
125644096 (MYO5C)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125644096 (MYO5C)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125644096 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
125644096
NCBI-ProteinID:
XP_048723478
LinkDB
All DBs
Position
10:complement(23322501..23382007)
Genome browser
AA seq
1741 aa
AA seq
DB search
MALAELYTQYNSVWIPDNEEVWQSAEITKNYKTGDHVLHLLLEDGTELNYPVDPAPLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFVESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSVIVSGESGAGKTVSARYAMRYFAT
VSKSNSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQTHQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKHLKLGHAEEFNYTRMGGNTVIEGVDDR
ADMMETQKTFTLLGLKEDFQMDVFKILAAILHLGNVQMTAVGDEKSSVSLEDKHLNIFCE
LLDLDNDKVAQWLCHRKIITTSETVIKPMTKLQALNARDALAKKIYSHLFDFIVERINKA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNYINKNPFFQKPK
MSNTSFIIQHFADKVEYKSEGFLEKNRDTVYEVLIDILKNSKFHLCANFFQDHPVPISPF
RSAITVKSAKTVVKPPNKQFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDQKLPFE
FDSKRVVQQLRACGVLETIRISSQSYPSRWTYIEFFSRYSILMTQHELSLSDKKKICKTV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIVIQKNVRSWHQRKKFLRIK
QAAVTIQQYFRGQRAVRQAITATALKQAWAAIVIQKHCRGYIVRKLCQLICVAAITIQAY
VRGFLARKKFQKMLKEHKAVILQKHARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENHGLLERLTHLASTHASDLDSIQKLELELEKLVTQKRTSEEKGKKYKEDTEQKLSK
LEKQNAELQEQKTFLEQKLQEETEEMKDKMDDLTKQLFTNVQQEERQRIILEKKFQNEKQ
DYEKEIESLKGEIKTLEEEKIKLQDQIQEEHIIQDGLKLEVGHLQKQAKMIPELQKEIEL
LQTQKMDVEKQVQSQKQEMREKVSEVAQQFFESYDVEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESQFQSQKENYEKEIEALNFKVEHLSQEIIHLQKLFREENDINDSIQLE
VSRLTSENMMIPDFKQQISELQKQKVDLEQRLREQAAKMKGKMEEMPNQVHHSLSEKGQR
RTLEDQTETHTKEEEKQIATIQEIQKTINHLKEQHEIEDKVKSKIKQEAFNLTLENIDLE
EELDMKDRVIKKLQDQIKTLTKIIEKANETHVPAVSKEYIGMMEYVKEDEARIIKNLILD
LKPRGVVVNMIPGLPAYILFMCVRYADYVNDDDMLKSFMSITTNGIKQVIKEHAEDFEML
SFWLSNTYHFLNCLKQYSGEEEFMKQNTPRQNMNCLKHFDLSEYRQILSDLAIRIYHQFI
LVMENNIQPMIVPGMLEYESLQGISGMKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYST
MCQNGLDTELLKQAVKQLFFLIGAATLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKN
LQSSSAKETLEPLSQAAWLLQVKKITDEDAKEIYERCTSLSAVQIVKILNSYTPIDDFEK
RVSPSFVRKVQAMLNNREDIPQLMLDTKYLFQVTFPYTPSPYALEIIQIPSSFKLGFLTR
V
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaacagcgtttggatccctgacaatgaagaa
gtttggcagtctgctgaaatcacaaagaactacaaaacaggagaccatgtgcttcaccta
ctattagaagatggaactgaattgaattaccctgttgatccagcacctttgccacctcta
cgaaatcctgacatacttgttggtgaaaatgacctcaccgcacttagctatctccatgaa
cctgctgttctacacaatcttagagttcgttttgtggagtcaaaacttatctacacttat
agtggaatcattttggttgcaatgaacccctataaacagttgccaatatatggggatgcc
attatccatgcatatagtgggcagaacatgggggatatggatccacatatatttgctgtg
gcagaagaggcttacaaacaaatggcaagaaacaacaggaatcagtctgttatagtcagt
ggagaatcaggagctggaaaaactgtgtctgctagatatgctatgagatactttgccaca
gtcagtaagtcaaacagcaatgcgcacgtggaggataaagtactggcatccaacccaata
acagaggctgtaggcaatgcgaaaacaacacgcaacgataatagcagtcggttcgggaag
tacactgaaatcagttttgatcagacacaccaaatcattggcgccaacatgaggacgtac
ctgcttgagaaatccagagttgtctttcaatcagagaatgaacgaaattaccatatattc
taccagctgtgtgcttctgctctgcaaccagaatttaagcatcttaaattggggcatgca
gaagaatttaattatacaagaatgggtggcaacactgttattgaaggagtcgatgacaga
gcagatatgatggagacccagaagacgttcactctactaggtctgaaggaggattttcag
atggatgtttttaaaatactggcagccatcctacacttaggcaatgtgcaaatgacagct
gtcggtgatgaaaaatcttcagtcagcctggaggataaacatctcaatatattctgtgaa
cttctggatttagacaatgacaaagtggcacaatggttgtgccaccgaaaaattatcact
acctcagagactgtaataaagcctatgacaaaactccaagctcttaatgcaagggatgct
ttggcaaagaagatctattctcacctgtttgacttcattgtggaaagaattaacaaagct
ttgcatttttctggaaagcagcacacttttattggtgttttggacatttatggatttgaa
acttttgatgtgaacagttttgaacagttttgcatcaattatgctaatgaaaaactgcaa
caacaatttaaccagcatgtctttaaacttgaacaagaggaatatatgaaggaagacatc
ccatggactctaatagacttttatgacaaccaaccagtcattgaccttattgaagctaaa
atgggcattttagagctgctagatgaagagtgcttgttacctcacgggactgatgaaaat
tggcttcaaaagctatataataattatatcaacaagaacccattctttcaaaagcccaaa
atgtcaaacacatcttttatcatccagcactttgctgataaggtagagtacaaatctgaa
ggatttctggaaaaaaacagagatacagtgtatgaagtattgattgacatcttgaaaaac
agcaagtttcatctgtgtgcaaacttttttcaagaccatccagtgcccatttcacccttc
cggtcagctataacagtcaaatcagcaaaaacagtggtcaagccacctaacaaacagttc
cggacgacggttggcaataagttccgcagttctttgtatttacttatggaaacacttaat
gcaaccactcctcactatgtacgatgcataaagccaaatgatcagaagttaccatttgag
tttgactcaaaaagggtggtgcaacaactgcgagcatgtggtgttttggaaactattcga
attagctcacagagctatccatccaggtggacttacattgaatttttcagccgttacagc
attctcatgacgcagcatgaactctctttaagtgacaagaaaaagatttgcaagactgtt
ttgcagaggctaatccaggatcctaaccagtatcagtttgggagaacaaaaattttcttt
agagcaggacaggttgcttatttagaaaaactgcggtcagataaactgagacaagcatgc
atcgtgatccaaaagaatgttcgaagctggcatcaacggaagaaattcctccgtataaaa
caagcagctgttacaatacagcagtacttccgtggacagcgggctgtacggcaagctatc
actgctacagctctaaagcaagcatgggctgctatagttattcagaagcactgtcgggga
tatattgtccgtaaactttgccagctcatctgtgtggctgctataacaatccaagcttat
gtgcgaggatttctagcaaggaagaaattccaaaagatgctcaaggaacacaaggctgta
atccttcagaaacatgcccgtgcttggcttgcaagacgcagatttcagaatattcggcga
tttgtgttgaatatccagctttcgtacagagttcagcgactgcagaagaaactagaagac
cagaacaaagaaaatcatggcttactggagaggctgactcacctggcttcgactcatgcg
agtgacctagattcaatccagaaacttgaattagagcttgaaaaattagtgacacaaaag
agaacctctgaggaaaaaggaaagaaatataaggaggacactgaacagaaactctcaaaa
cttgagaaacagaatgcagaactgcaagaacaaaaaacattcttagaacagaagctccaa
gaggaaactgaggaaatgaaagacaaaatggatgacctcacaaaacaactgtttaccaat
gtacaacaagaagaaagacaaagaataatacttgagaaaaagttccaaaatgagaagcaa
gactatgaaaaagaaattgagtcattaaagggagaaattaagactctcgaagaagagaaa
attaagctgcaagatcaaattcaggaagaacatatcattcaggatggcttaaaactggaa
gtaggacaccttcaaaaacaggcaaagatgatacctgaattgcaaaaggaaattgaactg
cttcagacacagaaaatggatgtggaaaagcaggtccaatcccagaagcaagaaatgaga
gaaaaggtgtcggaagttgcacaacaattttttgagagctatgatgttgaggatgtaaga
agcaggctgtccacagaagatttggaacatttaaatgaagatggagaactttggtttgct
tatgagggcctgaaaaaagccacaagagtgttggaaagccaattccagtctcagaaagag
aactatgaaaaagagattgaagctttgaactttaaagttgaacatcttagtcaagaaatt
atccatttacaaaagttgtttagggaggaaaatgacataaatgacagcatccaacttgaa
gttagtagactaacatcggaaaacatgatgatcccagactttaaacagcagatttctgaa
cttcaaaagcaaaaggtggatcttgaacaacgccttcgagaacaagctgccaagatgaaa
ggaaaaatggaagaaatgcctaatcaggtgcatcacagtctgtcagagaaaggtcaaagg
aggacactggaagaccagactgaaacacacacaaaagaagaagagaagcagattgccaca
atccaagaaattcagaagacaatcaatcacctgaaggagcaacatgaaattgaggataaa
gtaaagagcaagataaagcaggaggcatttaatcttactctggaaaacatagatcttgaa
gaagagttagacatgaaagacagagtaataaaaaaattgcaggatcagatcaagactctt
accaagattattgaaaaagccaatgaaacacatgtgccagctgtgtctaaagagtacatt
ggaatgatggagtacgtaaaggaagatgaagcaagaattattaaaaatctcatccttgat
ctaaagccacgtggagtggtagtgaatatgattccgggcctaccagcttacatcctgttc
atgtgtgtgagatatgcagattatgtgaatgatgatgacatgctgaaatctttcatgagt
ataaccactaatggcatcaaacaagttattaaggagcacgctgaagattttgagatgttg
tccttttggctctccaatacatatcattttcttaactgtttgaaacaatacagcggggaa
gaggaattcatgaagcaaaatactccacgtcagaatatgaactgtttgaagcattttgat
ctttcagaatacagacaaattcttagtgacttggccattcgtatctatcaccaattcatt
cttgtaatggagaataacattcagccaatgatagtgccgggtatgcttgaatatgaaagt
ctccaaggaatttctggcatgaaacccacaggattccgtaaacgttcttctagtatagac
gacaccgatacctacacaatgacctccatcctgcaacagctcagctatttttatagcaca
atgtgccagaatggcttggacacagagcttctaaagcaggcagtgaagcagcttttcttt
ctgattggagcggccacccttaatagtcttttcctccgcaaggacatgtgctcttgtcgg
aaaggaatgcagataaggtgtaatatcagctacttagaagaatggcttaaagaaaagaat
ctgcagagcagttctgccaaggaaactttggaacctctctctcaggcagcctggctcctt
caggtcaaaaagatcacagacgaggatgccaaggagatatatgaacgctgtacgtccctg
tctgctgtgcagatagtaaagatcctcaattcatacactcctatagatgattttgagaaa
agagtgtccccatcgtttgttcgtaaagtccaggctatgctcaataatcgagaggatatt
ccacaattgatgctagataccaaatatctctttcaagtgacatttccttacaccccatct
ccatatgctttggaaattatacagattcccagcagtttcaaacttggctttctcacaaga
gtgtaa
DBGET
integrated database retrieval system
