Caretta caretta (Loggerhead turtle): 125644139 Help Entry 125644139         CDS       T09292                                  Symbol ACAN Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism ccay  Caretta caretta (Loggerhead turtle) Brite KEGG Orthology (KO) [BR:ccay00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ccay00535]     125644139 (ACAN)    00536 Glycosaminoglycan binding proteins [BR:ccay00536]     125644139 (ACAN)    04091 Lectins [BR:ccay04091]     125644139 (ACAN) Proteoglycans [BR:ccay00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    125644139 (ACAN) Glycosaminoglycan binding proteins [BR:ccay00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    125644139 (ACAN) Lectins [BR:ccay04091]  C-Type lectins   Lecticans    125644139 (ACAN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF EGF_TEN hEGF I-set EGF_CA Antimicrobial25 Ig_3 Motif Other DBs NCBI-GeneID:  125644139 NCBI-ProteinID:  XP_048723572 LinkDB All DBs Position 10:15288067..15362958 Genome browser AA seq 1825 aa AA seqDB search MTTLLLVFVCLRVITAAISVEVSDHGNTLSVSIPERSPLRVILGNSLTIPCYFIDSLDHV TPAPYTPPLTPRIKWSRLSNGKEVVLLVATEGQVRINTEYTEVISLPNYPAIPTDATLEI KALRSNDTGIYRCEVMHGIEDSQDTIEVIVKGIVFHYRAISTRYTLDFEKAKQACIQNSA VIATPEQLQAAYDDGFDQCDAGWLADQTVRYPMHHPREGCYGDKDEFPGVRTYGIRETDE TYDVYCYAEEMQGEVFYATSPEKFTFQEAAEKCLSLGSRLATTGELYLAWKAGMDVCSAG WLADRSVRYPISKARPNCGGNLVGVRTVYLHVNQTGYPHPHSRYDAICYTDEDFLVPENF TIWTVTQTEVEIPLPHNVTEEEARGSIATLEPIDFTPTASELDEGFTVTPDLFATGITAE TAFTEAENVTEEGVTAVWVTPEEVTISVLDTLFTSWAPEVSSAKEDLGVTATPELESASV EEMIVQVTAAPESGLIPEQPISPISPTGVVFHYRPATSRYSLTFTKAQQACLDNSAVIAT PEQLHAAYQTGFHQCDAGWLRDQTVRYPIVTPRNQCVGDKDSSPGVRTYGMRPASEMYDV YCYIDRLKGEVFFATQADQFTLLEAQEYCESQNATLASVGQLHAAWKLGLDRCRAGWLAD GSIRYPIVTPRPACGGDKPGVRTIYLHPNQTGFPDPLSRHHAFCFRALPSFDKDEFVEEQ IVTQVIPGLEEVPSGEETTVEMEFATEPENQTEWGTEVFPTDISLLSVSPSAFPPVSAIP DEPSGETALSGVPSGEISASGVLETSGEPSASGTFEPSGEPSGIEESGVPSVDLDFSGLP SGLPSGDESGLPSGIIEVSGLPSGEEELLVSASGIPDLSGVTSGLQEISGIPEISGLPSG EVSGVELTSGLPSGEYDESGLPSGFPTVSLVDTTLVEVVTTVAESQLEGKGTIGVSGEED LSGLPSAEWDISGKVSGLPSGVDISGAPSGIPDISGFPSGIDFSGAPSGIPDISGAPSGI PDISSFPSGIDFSGEPSGIPDISGLVDLSGLVSGVDRSGEPSGITFLNTSLVEVTTPSVT EAEAKKFLEISGLPSGDEDISGTVSGILDISGQPSGQIDFSGGVSGAPEMSGLPSGVIDI SGETSGVEVVSGLPSGIYDYSGLPSGFPTVSLVDTTLVEVVTQTSVAQEVGEGPSGILEI SGLPSGEREISGEVSGVMDISGLPSGTVDISGEPSGIPYFSGDISGVTDLSGESSAVTGV SGEASGLPGVTLVTSDLVEVVTKPTVSQELGGETAVTLPPIFESSGDGSSSGEIGREASA FPEITVETSGFHEISIETSTVPETNGETSALPEITIEISTVHETSGETSAIAEISIETST VHETSDKISALPEISIETSTFYKTRGETSVLPEVNIETSGIAVVSETSGAPEERREDSSG TPTHPLSDVSGETSAPDIVISTSMPDTELTQEPMGPEEARLEIQSSTPMVSEQETEIAVV LETLEISPTATAILPQVSPEATNVPEPTAEVIPKTCDEKPCGAGTCQERDGNITCLCPLG YMGDHCDIDIDECHSSPCLNGATCADGIDSFKCLCLPSYGGDLCEIDLEDCDEGWTKFQG HCYKHFEQRETWVEAETRCREHQSHLSSIITPEEQEFVNNYAQDYQWIGLSDRAIEHDFR WSDGNSLQYENWRPSQPDNFFAAGEDCVVMIWHEQGEWNDVPCNYHLPFTCKKGTVACGD PPVVENARTFGRKKDRYEINSMVRYQCNQGYIQRHVPTIRCQPNGHWEEPRIGCIDPSIY KRRLHKRSPRNRSRTNGRAAQTPTR NT seq 5478 nt NT seq  +upstreamnt  +downstreamnt atgaccactttactattagtgtttgtgtgtttgcgagtcatcactgcagccatctctgtg gaagtttcagatcatggtaacacactgagtgtgagcatacctgaacggtctcccctgcgt gtcatcctgggaaactctctgaccatcccctgctacttcatcgactcattggatcatgtc accccagccccctatacgcctcctctgaccccaagaatcaaatggagcagactctccaat gggaaggaagtcgtcttactagtggccacagaggggcaagttcgaatcaacactgagtac acggaggtgatctctctgcccaactatcctgccatccccaccgatgccaccttggaaatc aaagcgctgaggtccaacgacactgggatctatcgttgcgaggtgatgcatggtattgag gacagccaggatacgatagaggtcatagtgaaaggaatcgtgttccattacagagccatc tccaccaggtacactttggactttgagaaggcaaagcaggcatgtatccagaacagtgct gtcatcgctacccctgaacagctgcaggctgcctatgacgatgggtttgatcagtgtgat gccggctggctggctgatcagactgtcaggtacccaatgcaccatccccgagagggttgc tatggtgacaaggatgaatttcctggagtgaggacctatggcattcgggagacagacgaa acatacgatgtttattgttatgcagaggaaatgcaaggtgaagtcttctatgccacctcc ccagagaagttcaccttccaggaagctgcagagaaatgcctcagtcttgggtcccgtttg gccaccacaggagagctgtacctggcatggaaggctggaatggatgtgtgcagtgcaggc tggctggcagaccgcagcgttcggtatcccatttccaaggcacgtcccaactgtggtggg aacctggtgggggtgcggacagtgtacctccatgtcaatcagacggggtaccctcaccct cattcgcgctatgatgccatctgctacacagacgaggactttttagtccctgagaacttc accatctggaccgtcactcaaaccgaagtggagatacctctcccacacaatgtcacagag gaggaagcccgagggagcattgcaactctagagccaatcgacttcacacccactgcctca gagctggacgaaggcttcacagtgactccagacctctttgccactggtatcactgccgag acagctttcacggaggcagagaatgtgactgaagagggagtcacagctgtatgggtgact cctgaagaggtcaccatttcggtcctggacactcttttcaccagttgggcaccggaggtg agctcagcgaaggaggacttgggggtgactgccacgccagaactagagtctgcctcagtg gaagagatgattgtgcaggtgacagctgctcctgagagtggtctcattcctgagcagccc atttctcccatttctcccactggtgtcgtgtttcattaccgaccggccaccagcaggtat tccctcaccttcaccaaagcccagcaggcctgcctggataacagtgctgtcatcgccaca cctgaacaactgcacgctgcctaccagactggctttcatcagtgtgacgctggctggctg agggatcagactgtcagataccccattgtgaccccacggaatcaatgtgtaggagacaag gacagctccccaggcgtgcggacgtatggcatgcgcccagcttctgagatgtacgacgtg tactgctacattgaccgactgaagggtgaggtgttctttgcaacccaagcagatcagttc accctcctagaagcccaggaatactgtgagagccagaatgccacgctggcctctgttggg caactccatgccgcctggaagctgggcctggatagatgccgcgctggctggcttgctgat ggcagcatccgatatcccattgtgactccacgtcctgcttgtgggggagacaaacctggt gtgagaaccatctacttgcaccccaaccagacgggatttcctgacccactgtcaaggcac catgccttctgtttcagagccctgccatctttcgacaaggatgaatttgttgaggagcag attgtaacccaggtgatccctggtttggaggaagtgccctctggggaggagacaactgtg gaaatggagtttgccactgaacctgaaaatcagacagagtggggaacagaagtctttcca actgacatttccttgctatcagtgagtccatcagctttcccccctgttagtgcaatacca gatgaacccagtggagagactgctctcagtggagtgccttcaggggagatatctgcatct ggagtacttgaaaccagtggtgaaccatcagcttctggaacatttgaacctagtggagag ccctcagggatcgaagaaagcggagtgccatctgtagacctggatttcagtggacttcct tctggactgccgtcaggcgatgaaagtgggctgccctcgggcattattgaagtcagtggg ttaccttctggcgaggaagaactattagtgtctgcttctggaatcccggaccttagtggg gtaacatctggactgcaagaaatcagtggaattccagaaatcagtgggctaccttctgga gaagtctctggtgttgagcttactagtggcctgccttccggagagtatgatgaaagtgga ctcccatctggttttccaactgtctctcttgtggatactactttggtggaagttgtaaca acagtggcagaaagtcaactggaaggaaaaggaacaattggggtcagtggagaagaagac ctatcggggttaccatctgctgaatgggacattagtggaaaagtcagtgggttgccctca ggagttgatatcagcggagcaccgtcggggatacctgatatcagtggctttccctcagga atcgatttcagtggagcaccatccgggatacctgatatcagcggagcaccgtctgggata cctgatatcagcagctttccctcaggaatcgatttcagtggagaaccatctgggatacct gacataagcggccttgtagacctaagtggcctcgtttctggtgttgatagaagtggagag ccctcaggcattacctttttaaataccagtttggttgaagtgacgaccccatcagttacg gaagcagaagcaaaaaagtttttggaaatcagtggattgccctctggggacgaagatata tcaggtacagtgtctggaattttagatattagtggtcagccttctgggcaaatagacttc agtggaggggtttctggagctcctgaaatgagtggacttccaagtggagtaattgacatc agtggagaaacctctggagttgaggttgttagcggcctgccatctggaatttatgattat agtggactcccatctggctttcccactgtctctcttgtggatacaactttagtggaagtt gtaacacagacatctgttgcacaagaggtaggagaagggccatctgggatattagaaatc agtggacttccttcaggggaaagagaaatatctggagaagtgtctggagttatggatatt agtgggttaccatcagggacagtagacatcagtggagagccatcaggcattccatacttt agtggagacatttctggagtcacagacttaagtggagagtcctcagcagtgaccggagtt agtggagaggcctccggacttccaggcgtcaccttggtcacttctgatttggtcgaagtt gtgacaaaaccaacagtttcacaggagctaggtggagaaacagctgtgacactcccccct atttttgagtcaagtggagatggctcttcatctggggaaattggtagagaagcctctgca tttcctgaaattactgtagaaacatctggatttcatgaaattagcatagaaacatctaca gttcctgaaactaatggtgaaacatctgcattgcctgaaattaccatagaaatttctaca gttcatgaaaccagtggtgaaacatctgcaatagctgaaattagcatagagacttctaca gtacatgaaaccagtgacaaaatatctgcattgcctgaaattagcatagaaacttctaca ttttacaaaaccagaggtgaaacatctgtattacctgaagttaacatagaaacatctggc atagctgtggtcagtgaaacttctggagcaccggaagagaggagggaagattcttcagga acacccacacacccactctcagatgtttcaggggaaacctctgctccagacattgtaatt agtaccagtatgccagacactgaattaacacaagagcccatgggtcctgaagaggcccgg cttgaaatacagtcctctactcccatggtatcagaacaagagaccgaaatagctgttgtt ctagaaacgttagagatatcacccactgccactgctatcttgcctcaagtttcaccagaa gccaccaatgtgccagaacccactgcagaagttatacccaagacatgtgatgagaagccc tgtggagcgggaacctgccaggaaagagatggaaacatcacctgcttgtgcccgcttggg tacatgggggaccactgtgatatagacattgatgagtgccactcaagcccctgtctgaat ggagctacctgcgctgatggcatcgactctttcaaatgcttatgccttcccagctacgga ggggacctgtgtgagatcgacctggaggactgtgacgagggctggaccaagttccagggc cattgttacaagcactttgaacagagagagacgtgggtggaagctgagacccggtgccgg gaacatcagtcccacctgagcagtatcatcactccagaagaacaagagtttgtaaacaac tacgcccaggattaccagtggattggactcagtgacagggctatcgaacacgacttccgc tggtccgatggaaattccctccaatatgagaactggcggcccagccagcccgacaacttc tttgcggcaggagaggattgtgtggtgatgatctggcatgagcaaggcgagtggaatgat gtcccatgcaactatcacctccctttcacatgcaagaaaggaacagttgcctgtggggac cctcctgtggtagagaacgccaggacctttggaaggaagaaggaccgatatgaaataaac tccatggtacggtaccagtgcaaccagggctacatacaacgccacgtgcctacgattcgg tgccagcccaatggccactgggaggaaccacggataggctgcatagatccctccatctac aaacgcagactacacaagaggagcccaaggaatcggtcgagaaccaatggcagagccgca cagacacccacccgttag

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