Caretta caretta (Loggerhead turtle): 125644206
Help
Entry
125644206 CDS
T09292
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125644206 (CHD2)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125644206 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
125644206
NCBI-ProteinID:
XP_048723775
LinkDB
All DBs
Position
10:complement(12508270..12611935)
Genome browser
AA seq
1838 aa
AA seq
DB search
MMRNEDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSEQGSEHGSETNSSSESS
ESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSESENESPKRRGQKQMRKPGKWKREASGEEEDENGAEQGSSAESEPEQKKV
KARRPVLRRAVVKASVKKPHKPQRGKRRKKQDSSEDEDDDEDDETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGTDEQQDNSETIEKVMDVRVGKKGATGASTTVYETEANGNP
SADFDPEKDEGEVQYLIKWKSWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL
AKVTPEDVEYFSCQQELAAELNKQYQIVERVIAVKTNKSAMGHSEFPAHSRKLSSNEPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNHRNNSKTIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFYQHQLY
GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDMMSRNTIREYEWIHSQTKRLKFNALI
TTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLLDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEDDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERETGMEMLMSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYP
FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSSSA
TDELLSQFKVANFATMEEEETELDERSQRDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQANDSDSDAESKRRIQRSSGSESETDDTDDDKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSIADLKRLGELIHNSCVSAMQEYEEQL
KENPGEGKGPGKRRGPTLKISGVQVNVKSIIQHEEEFEMLHKSIPKDPEEKRKYCLTCRV
KAAHFDVDWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLEKKETVKDGEETKLKKRKPRVKKENKAPKVKDEHGNDLSSPRHSDNQ
SEEGEVKEDGLEKSPVKKKQKKKENKENKEKQSTTKKEKEGEKEKKKTKDKKEKAKGSET
KSGSKGKRSQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKG
LTVQEQLEHTRNCLLKIGDRISECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLY
KMAHKKRSQEEEQEQKKKEDMAGSKRLFRPEPSGSSRDSLMSQSHLPPNPHSQKLHLPPS
HPQQMHGHQRDNYSHPNKRHFSNADRGDWQRDRKFNYGGNSNQVWGGERHHQYEQHWYKD
HHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSEE
FRPQNYHQQEFRRMSDHRPPMGYHGQGPSDHYRSFHTDKSGDYKQPLPPPHSQVSDPRSP
PSQKSPHESKSPLDHRSPLDRSLEQKNNPDYNWNVRKT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaatgaggacaaaagccaaggagaggagggttcagtacacagcaatgcatcg
agtcactcagcatctgaagaggcctctggctccgactctgcaagccaatctgaaagcgag
caggggagcgaacagggcagtgagcatggcagcgagacaaacagcagctcagagtcctcc
gaaagccaatctgaatctgaaagcgagtcaacaggttcgaaatcccagcagaccccacct
gaaaccaaagaaaaaccagccagcaagaaggaaaggatagcagatgtaaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggagatcaaaccgaagcagacaagaaccatcg
cgatttaatataaaagaagaggcaagtagtgaatctgaaaatgaaagcccaaaaagaaga
ggccagaagcaaatgagaaaaccaggtaaatggaaaagggaggcttctggggaagaggag
gatgaaaacggtgcggagcaaggctccagtgcagaaagtgaaccagaacagaagaaagtt
aaagccaggagaccagtcctgagaagagcagtggtcaaagccagtgttaaaaagccccac
aagccccaacgtggtaagaggagaaagaaacaagactcgtctgaagatgaagatgatgat
gaagacgatgagactcccaaaaggcaaacccggcgcagagcggctaaaaatgtcagttac
aaagaagatgatgattttgagacggattccgatgacctgattgagatgaccggggaaggg
accgatgaacagcaggacaacagcgagaccattgagaaagtcatggacgtcagggttgga
aagaaaggagccactggtgcttctaccactgtgtatgagactgaggccaacggcaacccc
agcgctgactttgaccctgaaaaggatgagggagaggttcaatacttgatcaagtggaag
agctggtcgtacattcacagcacgtgggagagtgaagagtccctgcaacagcagaaggtg
aagggcctgaaaaaactagagaacttcaagaaaaaagaggatgaaatcaaacaatggcta
gccaaggtaactcctgaagatgtggaatacttcagctgccaacaggagcttgctgcagag
ttgaacaaacagtatcagatagtggagagagtgatcgctgtgaagaccaacaagtctgca
atgggacattctgagttcccagctcacagtcggaaattgtcctctaatgagcctgaatat
ttgtgcaagtggatggggttgccctatgcagagtgcagctgggaagacgaggccttgatt
agcaagaaatttcaacactgcattgacagcttcaaccatcgcaacaactccaaaaccatt
cccactcgggactgcaaggtgttgaagcagagacccaggtttgttgctttgaagaaacag
ccttcttacattggtggcgagaacctggagctccgagattaccagctggaggggctcaac
tggcttgctcactcgtggtgcaagaacaacagcgtgatcttggctgatgaaatgggcttg
gggaagactatccagacaatatcatttctctcctatctcttctatcagcatcagctgtac
ggcccctttctgatagtggtgcccttgtctactctgacttcgtggcagagggagtttgaa
atctgggcaccagagattaatgtggtcgtttacataggagacatgatgagtagaaatacg
atccgtgaatatgagtggatccattctcagactaaaaggctgaagttcaatgcactcatc
acaacatatgagatcctcctcaaagataagactgttctgggcagcattaattgggccttt
ctgggtgtggacgaagcccatcggttgaagaacgatgactctttgctgtataaaactctg
cttgatttcaagtccaaccataggctcctgatcactgggaccccgcttcagaattccctc
aaagagctctggtcactgctgcactttatcatgccggagaagtttgagttctgggaggat
tttgaagatgatcatgggaaagggagagagaatggctaccagagccttcacaaagtcctg
gagcctttccttctgcgcagggtgaagaaggatgtggagaaatccctgccggccaaagtg
gagcagattctccgggtggaaatgtctgccctacagaagcagtattataaatggattttg
acaagaaattacaaggctctctcgaaggggacaagaggaagcacgtctggcttccttaac
attgtgatggagctgaaaaagtgttgtaaccattgctatctcattaaacctccggaagaa
aacgaaagggagactggcatggaaatgctgatgtctctaatcaggagcagtggaaagcta
attctcttggacaaactgctgaccaggctgcgtgagagaggtaacagagtcctgatcttc
tcccagatggtgaggatgctggacatcttggcagaatacttggctatcaagcactaccct
ttccagcgcttggacggctcaatcaaaggggagatccgaaagcaagctctggatcacttc
aacgcagaaggctctgaggacttctgtttcttgctgtcaacacgagctggcggactggga
attaacctggcttctgcagacactgtggttatctttgactcggactggaacccccagaat
gacttgcaggctcaggctcgggctcaccgaattggacagaagaagcaggtgaacatttac
cgcttagtcacaaaggggacagtggaagaggagatcatcgaaagggctaagaaaaagatg
gtgttagatcatctggtgatccagcgtatggacaccacgggccgtactgtactggataac
aactctgggagatccaactcaaatcctttcaacaaagaggagttgacagctattctgaag
tttggagctgaggatctcttcaaggagattgaaggggaagaatcggagccacaggaaatg
gatattgatgagattttacgcctggctgaaacacgagagaacgaagtgtcctcaagcgcc
acggatgagcttctgtctcaattcaaggtagccaattttgcaaccatggaggaggaagag
actgagctggacgagaggtcccagagggactgggatgatattattcctgaagagcaaagg
aagaaagtggaggaggaggaacgacagaaggagttggaagaaatctatatgttgcccaga
atccgcagctccactaaaaaggctcaggcaaatgacagtgattctgatgctgaatcaaag
agaaggatacaaaggtcatctggatcagagagtgagacggacgataccgatgacgataaa
aggccgaaacgccgggggcgcccacggagcgttaggaaagacacagtggaaggatttact
gatgccgaaatcaggaggtttatcaaggcttataagaagtttgggcttccactcgaacgg
ctggagtgcattgctcgcgatgccgagctggtggacaagtccatagctgatctgaaacgt
ctaggggaacttattcacaacagctgtgtgtcggcaatgcaggaatacgaggagcagctg
aaagaaaaccccggtgaggggaaagggcctgggaaaaggaggggtcctactctcaagatc
tctggtgtccaagtcaatgtgaaatccatcatccagcatgaagaagagtttgaaatgctg
cacaaatccattcccaaggacccggaggagaagagaaagtactgcctgacctgccgcgtc
aaagctgctcattttgatgtagactggggagtggaggatgattctcgtttattgctggga
atttatgaacatggctatggaaactgggagctaattaaaacggacccagaactgaagtta
actgataagatcctacctgttgagacagataagaagcctcagggaaagcagctccagacc
cgtgtcgattatttgctgaaattgctgaagaaagatctggagaagaaggaaactgtgaaa
gatggggaagagaccaaactgaagaagaggaaaccacgcgtgaagaaagagaacaaagct
cccaaagtcaaagatgagcatggaaatgacctgtcctctcctcggcactcggacaaccag
tcagaagagggtgaagtcaaggaggatggcttggaaaagagcccagtgaaaaagaaacag
aagaagaaagagaacaaagagaacaaggaaaaacagtcgaccacaaagaaagaaaaggaa
ggcgaaaaagagaaaaagaaaacaaaggataagaaggagaaggccaaaggtagtgagacc
aagtctggaagcaaagggaagcgatctcaaggtcctgtccacattactgcagggagtgag
cccatccccattggagaagatgaggatgatgacctggaccaggaaacgttcagcatatgc
aaagaaaggatgaggccagtgaaaaaggcactgaagcaactggataagccagataaggga
ctgacagtgcaagaacagctggagcatactcgcaactgcctcctgaaaattggcgatcgc
atctcagagtgccttaaagcctactctgaccaggagcacatcaaactgtggagaaggaac
ctctggatatttgtgtccaagttcacagaatttgatgccagaaaattgcacaaactctac
aaaatggctcacaaaaaaagatcccaggaagaggagcaggagcagaagaagaaggaggac
atggctggcagcaaaaggctattccgcccagagccttctggctccagccgggattccctc
atgtctcagtctcacctgcctcccaaccctcattctcagaaactccacctgcccccctcg
caccctcagcagatgcacgggcaccagcgggacaactacagtcaccctaacaagagacac
ttcagtaacgcagatcgaggagactggcagagagatcggaaatttaactatggtggcaac
agcaaccaggtctggggtggagaacggcatcaccagtacgagcagcactggtacaaggat
caccactacggggatcgtcggtctcgtggcgacccccaccgaagctccgggaactaccga
ccaaataacctctcccgcaagaggccatatgagcagtacaacagtgaccgagaccacagg
ggacacagagattattacgacagacaccatcacgattccaagcggcgaagatctgaggag
ttcaggccccagaactaccaccagcaggaattcagaagaatgtctgatcacaggccaccc
atgggataccacggccagggaccttcggaccattaccggtccttccatacagacaaatcg
ggggattacaaacagccgcttccccctcctcactcccaagtctcggaccctcgctcaccc
ccgtctcaaaaatcccctcatgagtccaagtcacccctggatcacaggtcacccctggac
aggtcattagaacagaaaaacaatccagattataactggaatgttcgaaaaacataa
DBGET
integrated database retrieval system
