Caretta caretta (Loggerhead turtle): 125644220
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Entry
125644220 CDS
T09292
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125644220 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125644220 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125644220 (CPSF4)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125644220 (CPSF4)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125644220 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
125644220
NCBI-ProteinID:
XP_048723798
LinkDB
All DBs
Position
10:76398411..76406529
Genome browser
AA seq
269 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLRAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQPQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNNVGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggaccacatcaagttcgacctggagatcgcggtggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaaatcaggtgctgctgtc
tgtgaattttttttaagagctgcttgtggaaaaggaggcatgtgtcctttccgacacatc
agtggagaaaagacagttgtttgcaaacactggctccgagggctgtgcaagaaaggagac
cagtgcgaattcctgcatgagtatgacatgaccaagatgcctgagtgttatttctactcc
aaatttggagagtgcagtaacaaagagtgtccgttcttgcacattgacccggagtctaag
atcaaagactgcccctggtatgacagaggcttctgtaaacacggtcccctctgcagacac
agacacactcgaagagtcatttgtgtgaattacctggtgggattctgtccagaggggcct
gcttgtaaattcatgcatcctcgatttgaactgcctatgggaaccacagagcaaccacca
ctgcctcagccgacacaaccccagcaaaagcaaaataacaatccgccattacaaaggtca
tcatccttgatccagttaacaagtcagaactcttctcccaaccagcagaggaccccacaa
gtcatcggagttatgcagtctcaaaacaacaatgtggggaacagaggtccccggccgctg
gagcaggtcacgtgttacaagtgtggtgaaaaaggacattacgccaacagatgcaccaaa
ggacatctggcctttcttagcggacagtga
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integrated database retrieval system
