Caretta caretta (Loggerhead turtle): 125644244
Help
Entry
125644244 CDS
T09292
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03440
Homologous recombination
ccay03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125644244 (TOP3A)
03460 Fanconi anemia pathway
125644244 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccay03032
]
125644244 (TOP3A)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125644244 (TOP3A)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125644244 (TOP3A)
DNA replication proteins [BR:
ccay03032
]
Eukaryotic type
DNA Topoisomerases
125644244 (TOP3A)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
125644244 (TOP3A)
FA (Fanconi anemia) pathway
125644244 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF_2
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
125644244
NCBI-ProteinID:
XP_048723841
LinkDB
All DBs
Position
10:complement(78184226..78199877)
Genome browser
AA seq
1019 aa
AA seq
DB search
MNFQARLFARCGVRLLSQSWSLFSQAAEDMTFRKIQKVLCVAEKNDAARGIADILSNSRM
RRREGFSKFNKIYEYDYHMFGQNVTVAMTSVSGHLLAHDFKMPFRKWHSCNPLVLFEAEI
EKYCPENFVDIKKTLEREAQQCQALVIWTDCDREGENIGFEIIHVCKAVKPSLQVFRARF
SEITPRAIRGACENLVQPDQNISDAVDVRQELDLRIGAAFTRFQTLRLQKLFPDVLAEQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVAHEHEDGMVDFNWKRNRLFNHTACLV
LYHMCMEDPVATVVEIGSKPKSKWRPLALDTVELEKLASRKLKINAKETMKIAEKLYTQG
YISYPRTETNIFPKDLNLTSLVQQQTQDPNWGAFAQGILDRGGPTPRNGTKSDQAHPPIH
PTKYTCNLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFVAHGLMILARNYL
DVYPYEKWSDKVLPVYERGSRFQPTTVEMVDGETSPPQLLTEADLISLMEKHGIGTDATH
AEHIETIKSRMYVGLTPDQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKFVVLRQQIEKYQKVFTEAVAKANKLDQALSQYFGEVRALEQQEEIYPAMPVSIRKC
PQCNSDMVLKSKKNGGFYLGCMNYPNCKAAVWFPESVLEVSKDDSVCAVCKPHPVHRLKF
KFKRGSVPPLLPLEFVGCIGGCDEMLREILDLKYLQGPSRPVQSVNRPANYLQVNQSLNR
MASYENGHMRPTTNPGVARAPRAASHPAPAAAENNAVVCNCREEAALLTVRKEGPNQGRQ
FYKCSAGSCNFFLWADQQSDDGNSVTHRSFAAPPDSLGERPPGSFRSLGGGRGLGRYGSN
GFDSGGGGSGTMCKCDQPAITRTVQKEGPNKGRQFHTCPKPREQQCGFFQWVDENVAPGT
AGAFSSNQFRSDGHLRGSGSKAKRPSNLSSEKGPTPKRQRTCGICHQLGHTRKTCPQDH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcaggccaggctttttgcccgctgtggggtcaggttgttgtctcagtcctgg
agtctcttctcccaggctgcagaggatatgacatttcgaaagattcagaaggtcctttgt
gtggcagagaaaaatgatgctgccagaggaattgcagatattctctccaatagcagaatg
aggcggagagaagggttttccaaattcaacaagatctatgaatatgactatcatatgttt
ggccagaatgttactgtggcgatgacctctgtttcgggacatttactggctcatgacttt
aagatgccatttcgcaaatggcatagctgcaacccacttgtactctttgaagctgaaatt
gagaaatactgccctgaaaactttgtggatattaagaaaaccctagaacgagaagcccag
cagtgccaggctctggtgatctggaccgactgcgatcgagaaggagagaacattggtttt
gaaataatccatgtttgcaaagctgtgaagccaagccttcaggtgttccgagcccgcttt
tccgagatcactcctcgtgccataagaggagcctgcgagaacctcgtccaacctgatcag
aacattagtgatgctgtggatgtcagacaggagctggaccttaggataggtgctgccttc
accagattccagaccttgaggctccagaagctcttccccgacgttttagctgagcagttg
atcagctatggtagctgtcagttcccaactctgggatttgtggtagaaagatttaaagcc
atccaggcctttgttcccgaggccttctataaaattaaagtggcccatgaacatgaggac
ggcatggtagacttcaactggaagaggaaccgactctttaaccacacagcatgccttgtc
ctctaccacatgtgtatggaggatccagtggccactgttgtcgagattgggagcaaaccg
aagagcaaatggaggcccctggcactagacactgtggaactcgagaagctggcttcccgc
aagctaaaaataaatgccaaagaaaccatgaaaatagcagaaaagctctacactcaaggg
tacataagctatccccgaactgagaccaacattttccccaaagacctaaacctcacctct
ttggtgcaacagcagacccaagaccccaactggggagcctttgcacaggggattctagac
cggggtgggccaacccctcggaatgggaccaaatctgatcaggctcaccctcccattcac
cccactaaatatacatgtaacctgcaggggaatgaacagcgactgtatgaattcattgtg
cgtcactttttggcttgctgctctcaggatgccaagggacaagaaacaactgtggagatt
gacattgctaatgagcgatttgttgctcatggactaatgatcctggccagaaactatctg
gatgtctatccttatgagaagtggagtgacaaggttctcccagtgtatgagagagggtct
cgctttcagcccaccacagtcgagatggtggatggggagaccagcccaccccaactcctc
acagaagctgatctcatttcactcatggagaaacatggcatcgggactgatgccactcac
gccgagcacatcgagaccatcaagtcacggatgtacgtggggcttactccagatcagagg
ttccttccggggcacctgggcatggggctggtagaaggctacgattccatgggctacgag
atgtcaaaacctgaccttcgtgctgagctggaggctgatctgaagctgatttgtgagggg
aagaaggacaaatttgtggtgctgaggcagcagattgagaagtaccagaaagtcttcact
gaagccgtggccaaagccaacaagttggatcaggctttatctcagtatttcggagaagta
agggcacttgagcagcaagaggagatctacccagcaatgcccgtttccattcggaaatgt
ccacagtgcaacagtgacatggtcctgaagagcaagaagaatggcggcttttatctgggc
tgcatgaactatcctaactgtaaagcagctgtgtggtttcctgaatctgtgctggaagtc
agcaaggatgacagtgtttgcgctgtgtgtaaaccccatccggttcataggctgaaattt
aagttcaagcgaggtagtgttccacccctgctgccactggaatttgttggctgtattgga
ggttgcgatgagatgttgagagagatcttggacctgaaatatttacaaggaccatccaga
ccggtacagtcagtcaaccggccagctaactacctacaagtcaaccagtcccttaaccgc
atggccagctatgagaatggtcacatgaggcctaccacaaaccctggtgtagcaagggca
cccagagctgctagtcatccagctcctgctgctgctgagaacaatgcagtggtgtgcaac
tgtagggaggaggcagcattgctcacggtgcgtaaagaagggcccaaccagggcaggcag
ttctataaatgcagtgccggcagctgcaacttcttcctctgggccgatcaacaatcagat
gatggaaacagcgtaacccacaggagctttgctgcaccccccgattccttgggtgaaagg
cctccaggaagcttcaggagccttggaggaggaagaggtctgggccgctatggaagcaat
ggttttgactcgggaggagggggcagtggcacgatgtgtaagtgcgatcagccggccatc
acacgcacagtccaaaaggagggacccaataaagggcgtcagttccacacctgcccaaag
ccgagagagcagcagtgcggcttcttccagtgggtggatgaaaacgtggccccaggaact
gctggagccttctcttcaaaccaattcaggagcgacgggcacttaagagggtcaggaagc
aaagctaaaagaccaagtaatctctcttctgaaaaaggacctactcccaagagacaacgg
acctgtggcatttgccaccagcttggtcacaccaggaagacatgtcctcaggaccactga
DBGET
integrated database retrieval system
