Caretta caretta (Loggerhead turtle): 125644246
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Entry
125644246 CDS
T09292
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00260
Glycine, serine and threonine metabolism
ccay00630
Glyoxylate and dicarboxylate metabolism
ccay00670
One carbon pool by folate
ccay01100
Metabolic pathways
ccay01200
Carbon metabolism
ccay01230
Biosynthesis of amino acids
ccay01240
Biosynthesis of cofactors
ccay04981
Folate transport and metabolism
Module
ccay_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
125644246 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125644246 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125644246 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125644246 (SHMT1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
125644246 (SHMT1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
125644246
NCBI-ProteinID:
XP_048723845
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Position
10:complement(78212743..78237005)
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AA seq
486 aa
AA seq
DB search
MAHLTNVNGELPSAELWVSHNKMVVEPLDASDPEVYDLIKKEKQRQRLGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELEILCQKRALEAYRLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVSPNT
GYIDYDQLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADENGAYLLADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGARSVDPKTGKEIPYNLESPINQAVFP
GLQGGPHNHAIAGIAVTLKQAMTPEFKAYQRQVVANCQALSATMIALGYHVVTGGSDNHL
ILVDLRNRGTDGGKAERVLEVCSIACNKNTCPGDKSALRPSGLRLGTPALTSRGFREEDF
QKVAHFIHKGIELTLRIQNDMSPKATLKEFKERLVSDGKYQAGLKSLKEEVETFAAAFPL
PGLPVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctcacttaaccaatgtcaatggagagctccccagtgctgaactctgggtgtcccat
aacaagatggtcgtggagccacttgatgccagtgacccagaggtgtacgacctcatcaag
aaagagaagcagcgccagaggcttgggttggagctgattgcgtccgagaacttcgcaagt
cgagcggttctggaggccttgggctcctgcatgaacaataaatactcggaagggtacccg
ggacagaggtactacggcgggacagagtttgtggatgagctggagatcctctgccagaag
agagctctggaggcttacaggctggacccacagaaatggggggtcaatgtccagccatac
tcaggctcccccgctaactttgcggtgtacacggccctggtggagccccatggcaggatc
atgggtctggacttgcctgatggggggcacctgacacatggcttcatgacagacaagaag
aaaatctcagctacctcaatcttctttgaatccatgccctacaaggtcagtcccaacact
ggctatatcgactacgaccagctggaggagaacgcccgtttattccacccaaagttgatc
atagcaggcgtcagctgttactcgcgtaacctggactacgcccgcatgaggaagatcgcg
gatgagaacggagcttacctcctggccgacatggcccacatcagcggcttggtggcagcc
ggtgtggtgccgtcaccatttgaacactgtgacgttgtgtcgaccacgactcacaagacg
ctgagaggctgccgggccggcatgatcttctataggaaaggagctcgcagcgtggatccc
aagactggcaaggaaattccatacaacctggaaagccccatcaaccaggccgtcttccca
gggcttcagggagggcctcacaaccatgccattgcaggaatcgctgtcactttgaagcaa
gccatgaccccggaattcaaagcctatcaacggcaggttgtcgcaaactgccaggcactg
tctgccactatgatcgcactgggctaccatgtcgtcactggtgggtctgacaaccacttg
atcctcgtggacctgcgcaacagagggacagatggcgggaaggctgagcgggtgctggaa
gtctgttccatcgcctgtaacaagaacacctgtcctggtgacaagagtgccttgcgccca
agcggcctgaggcttgggacaccagctttgacctcccggggattccgggaagaggacttc
caaaaagtagctcatttcatccacaaagggatagagctgacgctgaggattcagaacgac
atgagccccaaagcgacgctgaaggaattcaaggagaggctggtgagcgatgggaagtac
caggcgggtctcaagtctctgaaagaggaggtggagacctttgctgctgccttcccactc
cctggcctgcctgtcctttaa
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