Caretta caretta (Loggerhead turtle): 125644429
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Entry
125644429 CDS
T09292
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03420
Nucleotide excision repair
ccay03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125644429 (ERCC4)
03460 Fanconi anemia pathway
125644429 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccay03032
]
125644429 (ERCC4)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125644429 (ERCC4)
DNA replication proteins [BR:
ccay03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125644429 (ERCC4)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125644429 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
DUF4110
AmiA-like
Motif
Other DBs
NCBI-GeneID:
125644429
NCBI-ProteinID:
XP_048724338
LinkDB
All DBs
Position
10:complement(63404949..63436119)
Genome browser
AA seq
904 aa
AA seq
DB search
MAALLEHENQIFLDLFHRDGLVICARGLGIDRILLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEITSNCRYEVYTQGGVLFATSRILVVDFLTDRIPSNLITGI
LVYKAHRIIESCQEAFILRLFRQKNKKGFIKAFTDNAIAFDTGFCHVERVMRNLFVRKLY
LWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMLTIQTSILDILNVCLRELKRYNPALEVED
LSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLVE
SLRATEKAFGQNSGWLFLDSSTSMFVNARARVYRISDDKISKKSKVSEKMDIKEGKELKR
ELVLESNPKWEALREVLKEIESENENKNSEDLGGPGQVLICASDDRTCAQLREYIIAGAE
ALLMRLYNKSFGKDERAGEAWIKDRKAVKSKGNARSAKGPQTKKAKVHVSSKQNKIMKKQ
DLTLTQMMGKTEEENIGEEMEGYKESSSSEEINIEETKPEDFHLNLASDAYYGIFKTPLT
ILHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGNPYRVYFLIYGG
STEEQRYLTVLRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVRDSTSATVSTDTRKA
GGQEQKSVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICIERKSISDL
IGSLNNGRLYSQCISMSRYYKRPILLIEFDPSKSFSLTSRGSLHQEISSNDITSKLTLLT
LHFPRLRILWCPSPHVTAELFEELKQNRPQPDAAIAMAITADSEIVPESDKYNPGPQDFL
LKIPGVNAKNCRILMNHIKSISELVTLSQDKLSEILGNAVNAKQLYDFIHISYAEAISQG
KTRR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagaatcagattttcctggatctcttccaccgagacggg
ctggtgatctgcgcccgcggcctgggcatcgaccgcatcctgctgcgcttcctccgcctc
tattgcgagccggccagtctggtgctggtgctcaacaccagcccggccgaggaggagtat
tttattgatcagctgaggtcagatggagttgtccatcttcctcggcgtgttaccaatgaa
attacaagcaactgtagatatgaagtttacacacaaggtggtgtcctcttcgcaacaagt
cgaattcttgtggtggatttcttgacagatagaattccttcaaatcttataactggtatt
ttggtatacaaagcacacagaatcattgaatcttgtcaggaagcatttatcttgcgactc
tttcgccagaagaacaagaaagggttcatcaaagcctttacagacaatgccattgccttt
gatactggcttttgtcatgtggaaagagtgatgagaaatctctttgtacggaaactttat
ctgtggccaaggtttcatatagcggtgaattcatttttagagaaacacaaacctgaagtg
gtggaaatacatgtatccatgacccctgccatgctcactatccagacctctatactggac
atcctgaatgtgtgtctgagagaactcaaacgctataacccagctcttgaagtagaagac
ttatcattagaaaatgctattggaaaaccttttgacaagacaattcgtcactatttagat
cctctttggcaccaacttggagctaagaccaaatctttggttcaggatttgaagatatta
cgtactttgctacagtatctaactcagtatgattgtgtcacctttcttaaccttgtggag
tcattgagagcaactgaaaaagcatttggtcagaattcaggatggctatttcttgactct
agtacttcaatgtttgtaaatgctcgagcgagagtttatcgcatttcagatgacaaaata
agtaagaaaagcaaagtatctgaaaaaatggatattaaagagggaaaagaactgaaaagg
gaattggtcttagaaagcaacccaaagtgggaggccttaagagaagtattgaaagagatt
gaatctgagaacgagaacaagaacagtgaggatcttggtgggccagggcaagtgcttatt
tgtgccagtgatgaccgaacttgtgcacaactgagagagtatattattgctggagcagag
gcacttttaatgaggctctataacaaaagttttgggaaggatgaaagagctggagaagca
tggattaaggatagaaaagctgtcaagtccaaaggaaatgccagatcggccaaaggacct
caaaccaaaaaagccaaagtacatgtctcctcaaaacaaaacaaaatcatgaagaaacaa
gacttgactctaacccaaatgatgggaaaaacagaggaggaaaacataggagaggagatg
gagggctataaggaatcaagcagcagtgaagaaatcaatatagaagaaaccaaacctgaa
gatttccatctaaacttagcatcagatgcttattatggtatcttcaaaaccccgctaact
attcttcatcctttgcagggttgtagtgacccctatgctctcactcgggtattgcatgaa
gtggaaccaagatatgtagtgctatatgatgcagaactaacttttgttcggcagctggaa
atctacaaggcaagcaggcctgggaatccctacagggtttatttccttatatatggaggt
tcaacagaagaacagcgctatcttactgtgctgagaaaagaaaaagaagcttttgaaaaa
ctcattcgagagaaggccagcatggttatccctgaggaaagagaaggcagagatgaaaca
aacttggatctagtaagagattctacttctgcaactgtttctactgacacacgcaaagca
ggtggacaggaacagaagagcgttcaacaaactataatagtggatatgcgagaatttcgc
agtgagcttccatctctgattcatcgtcgtggcattgacattgaacctgttactttggaa
gttggagattacattctcacccctgatatctgcatcgagcggaagagtatcagtgatttg
atcggttccttaaataatgggaggctctattcccaatgcatttctatgtctcgttattat
aagcgaccaattcttctgattgaattcgaccctagcaaatctttctctctcacttcacga
ggctctctacatcaagagatttccagtaacgatattacttctaaactcacccttcttact
cttcatttcccaaggttacgtatcctgtggtgtccgtctccccatgtcactgctgagttg
tttgaggagttgaaacagaacaggccacagcctgatgcagcaatagcaatggccattaca
gcagattctgaaattgttcctgagtcagacaagtataaccctggaccacaggatttctta
ttaaaaataccaggtgtaaatgccaaaaattgccgtatcttaatgaaccacattaagagc
atttcagagctggtaactctctcacaggacaaactctcagaaattctgggcaacgctgtc
aatgctaagcagctttatgacttcattcacatatcctatgcagaggccatttctcaaggg
aaaaccagaagatga
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