Caretta caretta (Loggerhead turtle): 125644518
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Entry
125644518 CDS
T09292
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04145
Phagosome
ccay04814
Motor proteins
ccay05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125644518 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
125644518 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125644518 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125644518 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125644518 (DYNC1I2)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
125644518 (DYNC1I2)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125644518 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
125644518
NCBI-ProteinID:
XP_048724510
LinkDB
All DBs
Position
11:complement(38311827..38355376)
Genome browser
AA seq
647 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEALPVQEESDLEKKRREAE
ALLQSMGLTPDSPIAVQPLRVVTADTCLFHYLVPPPMSPSSKSVSTPSEAGSQDSGDGAV
GSRTLHWDTDPSVLQLHSDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMTQPK
EDDEDEDDVVVPKPSTEPEEEKTLKNDEEEEAAPHELTEEEKQQILHSEEFLSFFDHSTR
IVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQY
PELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGG
TYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWS
LDMLSQPQDSMELIHKQSKAVAVTCMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEM
FEGHQGPITGIHCHAAVGPVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVM
WSPTHPALFACVDGMGRLDLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSE
GQIVIYDVGEQIAVPRNDEWTRFGRTLAEINANRADAEEEAATRIPA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgaattgaaggcagagttagagcgcaaaaaacaacgcttggcgcaa
atcagggaggagaagaaaagaaaggaggaagaaagaaagaaaaaggaaactgatcagaag
aaggaagctcttcctgtacaagaagagtctgatcttgaaaagaaaagaagagaagctgaa
gcattgcttcaaagcatgggattaacaccagattctcctatagctgtgcaacctctacga
gtagtaacagcggatacctgtctgtttcactatttagtccctcctcctatgtctccatct
tccaaatctgtgagtactccaagtgaggctggaagccaagactctggtgatggtgctgtt
ggatctaggacgctgcattgggatactgatccatcagttcttcagctccactctgattcc
gatctgggacgtggacctattaaacttggaatggctaaaattacacaagttgactttcct
ccccgagaaattgttacatacacgaaggagactcaaacaccagttatgactcaaccaaag
gaagatgacgaagatgaagatgatgtagtggtaccaaagccatcaactgaacccgaagaa
gaaaaaacattgaaaaatgatgaagaggaggaagctgcccctcatgagcttacagaagag
gaaaaacagcaaattttacactctgaagagtttttaagtttctttgaccattctacaagg
attgtagaaagagctctttcggagcagattaacattttctttgactacagtggaagagat
ctggaagacaaagaaggagagattcaagcaggcgctaaactgtccttaaacagacagttt
tttgatgaacgctggtcaaagcatcgtgttgttagttgtttggactggtcatctcagtat
ccagaattgcttgtagcctcctacaacaataatgaagatgcccctcatgagcctgatggg
gtggctcttgtgtggaatatgaaatacaagaaaactactccagagtatgtctttcactgc
cagtcagcagtgatgtcggctacatttgcaaaatttcatccaaatctggtggttggtggc
acatattcaggccaaattgtgctatgggataatcgcagcaataaaagaaccccagtgcag
agaactccactttcagctgctgctcacacgcaccctgtatactgtgtaaatgtggttggg
acccaaaatgctcataatttgattagcatctcaactgatggaaagatatgctcatggagt
ctggacatgctttcccaaccgcaggatagtatggagttgattcataagcagtccaaggct
gtagctgtcacatgcatgtcctttcctgttggagatgtcaacaacttcgttgttggaagt
gaggaaggctctgtgtacacagcatgccgccatggcagcaaagcgggaatcagtgagatg
tttgaaggacaccaaggaccaatcacaggtatccattgccatgccgcagttggacctgta
gacttctctcatctttttgtcacctcatcatttgactggacagtaaagctttggacaact
aagaataataagcctctctactcctttgaagacaactcagactatgtttatgatgtgatg
tggtctcccactcaccctgccctgtttgcttgtgtggatggaatgggtaggcttgatctg
tggaatctcaacaatgatactgaggtgccaactgcaagcattactgtggagggtaatcct
gctcttaatcgtgtgagatggacacattctgggcgagagattgctgtaggtgattcagaa
ggacaaatagttatatatgacgtgggagagcaaattgctgttccgcgcaatgatgaatgg
acacgttttggtcgaacactagcagaaattaatgcaaacagagctgatgcagaggaggaa
gctgcaacccgcatacctgcgtaa
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integrated database retrieval system
