Caretta caretta (Loggerhead turtle): 125644654
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Entry
125644654 CDS
T09292
Symbol
CWC22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125644654 (CWC22)
Spliceosome [BR:
ccay03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125644654 (CWC22)
Complex C
U4/U6.U5 tri-SnRNP related factors
125644654 (CWC22)
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
125644654
NCBI-ProteinID:
XP_048724859
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Position
11:32501303..32559874
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AA seq
903 aa
AA seq
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MKSRVAHISHGSSYERKESHSSCRRSSSPEDRYAERERSWSPRDRGYSDHSKYDQEYSGK
GRDDKTVEARGWRRETPQEKGKERESDRRKQKKFPSPDRKSPERSVPQSSLGHNEPPSKK
RKEELDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVNKVNVSN
IENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAAVVAIINSKFPNIGELILKRL
ILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSIEVAIGFL
KECGLKLTEVSPRGINAIFDRLRHVLHESKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGL
DLVEEEDQFTHMLPLEDDYNPEDVLNVFKMDPDFMENEEKYKTLKKEILDEGDSDSETDQ
DAGSSEEDEEEDEEDEEGQKVTIHDQTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMDF
PDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYDTIHRLET
NKLRNVAKMFAHLLYTDSLPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPNLNA
RLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQKQDV
ESSDSSSSSSESDDSSDSNPDSSNSSSGSSSGRDSSSSSGHSSVSDAAKVKRKKMQKKNK
ALDKVARKKQGSKKKLIEKKIERSEQEGRYDVERDSERNADRNLRDPNRRDDLSKYPYDR
DDATDRNSYRSGKDWYYERNMDLENKHSNSKKKKAERRTSFSDNEKDKHWSKDNVHQSRR
KERSKSRERNRNNSSPREEEEQENRYRNGAEKRPEKYSRYSDQSRESRKNEDRRRENSPH
RRK
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtagagtggcacacataagtcatggctccagttatgaaagaaaagagagtcac
agctcttgccggaggagttcctctccagaagacaggtatgcagagcgtgagaggtcttgg
tcccctagagacagaggttactctgatcacagcaagtatgatcaagaatattcgggaaag
gggcgtgatgataaaactgtggaagccagggggtggaggagagagactccccaagagaag
gggaaagagagggaatctgatcgaaggaaacagaaaaaattcccttcacctgatagaaaa
agtccagaaagatcagtaccccagagctcacttggtcacaatgaacccccttcaaagaag
agaaaagaagagctggatccaattctcacccgtacaggtggtgcatacattcctccagca
aagctcaggatgatgcaggaacaaattaccgataaaaatagcttagcatatcaaaggatg
agttgggaagccctgaagaagtcgatcaacggtcttgtcaataaggtgaacgtttctaat
atagaaaatatcatccatgaacttcttcaagaaaatattgtcagaggaaggggattgctg
tctagatcaattttgcaagcacaaagtgcctctccaatctttacacacgtttatgcagca
gtcgtagcaattatcaattcaaagtttccaaatattggagaactgattctcaagaggcta
attctaaattttcgcaaaggatatcgcagaaatgataagcaactttgtctgacagcttca
aagttcgttgcacatctaatcaatcagaatgtggctcatgaggttttatgtttggagatg
ctcacgttgcttcttgaaagaccaacagatgacagtattgaagtagcaattggatttcta
aaggaatgtggactcaaattaacagaagtatctcctagaggtattaatgcaatctttgac
cgccttcgccacgttcttcacgaatctaaaattgacatgcgcgttcagtacatgatagaa
gttatgtttgctgtacgtaaggatggattcaaggatcacccaatcattccagagggacta
gacctagtagaagaagaggatcagtttactcatatgttacctttagaagatgattataac
ccagaagatgttcttaatgttttcaagatggatcctgacttcatggaaaatgaagagaag
tacaaaacccttaagaaggaaattcttgatgaaggtgatagtgactcagaaacagatcaa
gatgctggaagcagtgaagaggatgaagaagaggatgaagaggatgaagaaggacaaaaa
gtgactatccatgaccaaacagaaattaacctggtctcctttcgtcgtacaatttatctt
gctattcagtcaagcttagactttgaagaatgtgctcataaattgttgaagatggacttt
cctgacagtcaaactaaagaactctgcaacatgatccttgactgctgtgctcaacaaaga
acatatgagaaattctttggtttactggcagggcgtttctgcatgttaaaaaaagaatac
atggaatcctttgaagctattttcaaagaacagtatgatactatccaccgtttggaaaca
aacaaattgagaaatgtagccaagatgtttgctcatcttctgtacacagattcacttccc
tggagtgtccttgaatgtataatattgagtgaagaaactactacatcgtccagtagaatt
ttcgtcaaaatattcttccaggaacttagtgaatatatgggacttcctaatcttaatgca
agattaaaggatgaaacactgcaacctttttttgaaggattattgcctcgggacaaccca
agaaacactcgatttgccatcaattttttcacttccattggtcttggaggactaacggat
gaattacgggaacatctgaaaaatgcaccaaagatgatcatgacacagaaacaagatgtt
gagtcatcagatagctcatcatcttcctcagagtctgacgactcctcagattccaatcct
gacagcagtaatagtagctcaggatcatctagtggccgtgactcctcttctagcagtggc
catagcagtgtctcagatgctgctaaagtaaaaaggaagaagatgcaaaagaaaaataaa
gcattggataaagttgccaggaaaaaacaagggagtaaaaagaaactaattgaaaagaaa
atagaaaggagcgagcaggaaggtagatatgatgttgagagagattcagaaagaaatgct
gacagaaatttgagagatccaaataggagagatgatctatctaaatatccctatgacaga
gatgatgccactgacaggaacagttatcggagtggaaaggactggtattatgaaagaaat
atggatttagaaaacaaacacagtaattccaaaaagaagaaagcagagagaagaacttct
ttttctgataatgaaaaggacaaacactggagtaaagacaatgtacatcagagcaggaga
aaagaaaggtcaaaatctagagaaagaaaccgtaataattcaagtcccagagaggaagag
gagcaggagaatagatatcggaatggtgcagagaaacgcccagagaagtatagcagatat
tctgaccaatctagagaatccaggaaaaatgaggacagacgaagggagaattctccacat
aggcgaaaataa
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