Caretta caretta (Loggerhead turtle): 125644802
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Entry
125644802 CDS
T09292
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125644802 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125644802 (XRCC5)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
125644802 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Phage_int_SAM_5
CHB_HEX_C_1
Motif
Other DBs
NCBI-GeneID:
125644802
NCBI-ProteinID:
XP_048725272
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All DBs
Position
11:71647927..71725291
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AA seq
731 aa
AA seq
DB search
MARGGGKAAIVLCMDVGFAMSNSAPGEESPFEQAKKMMTMFVQRQVFAESKDEVSVVLFG
TDGTENTLASGDQYQNITVQRHLMLPDFDLLEDIQNAIQPGSEQTDFLDALVVCMDLLQK
ETIGKKYEKRHIEVFTDLSSPFSEDQVEIIIANLKKTGISLQFFLPFPVDDEDGSGDTGD
GRHSDMCRNSFPRKGLTEQQKEGICMVRKLMFALEEEGGLDEIYTFRESLERLSMFKKIE
RRPMAWPCQLTIGSNLSIRIVAYKSLTEEKVKKSWTLVDAKTLKKEDVQKETVYCLDDDD
ETEVQKDDLVQGFCYGSDIVPFSKVDEEQMKYKTEAKCFSVLGFSRSSQIQRHHYMGNQV
LKVFAAKDDEAAAVALSALIHALDELDVVAIVRYAYDRRSNPQVGVAFPCIKDAYECLIY
VQLPYMEDLRQYMFSSLKNNKKYAPTEDQLSAVDSLIDSMSLAYEDDDGETTEDLFKPSK
IPNPQFQRLYQCLQHKAFHPDKPLPPIEQHLLEMLEVPQEVREKCQAPLEKIKALFPLKD
AGKKKEQKTAQDVFKDNNEDGPSAKRAKAENEEGSFSIANLAEGSVTTVGSINPAENFCF
LVRQKNANFKEVSQQLVNRIEQFLETKGLQYYMKSINCIRVFREEAIKLAEVQCFNDFLQ
ALKEKVEDKTLADFWEILIQDGISLISKDEAEGSSVTHEEAKKFLAPKEKPAEAPSMAGE
GGDVDDLLDMM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggggaggcggcaaggcagccatagtgctgtgtatggatgtaggctttgcaatg
agcaattctgctcctggagaggagtctccgtttgaacaagccaagaagatgatgacgatg
ttcgtgcagcgacaggtgtttgctgagagcaaagatgaagtctctgtagttttgtttggc
acagatggtacagagaatacccttgccagtggtgatcagtatcagaacattactgtacag
agacacctgatgctaccggattttgatttgctggaggacatacaaaacgcgattcaacca
ggctctgagcaaacagacttcctggatgcacttgtcgtgtgcatggacttgcttcaaaag
gaaacaataggaaagaaatatgagaaacgacacattgaggtgtttacagaccttagcagt
cccttcagtgaggatcaggtggaaattatcatcgctaacttgaagaaaacgggaatctca
ctgcaatttttcttgccgtttccagtggatgatgaagatggaagtggggatacaggcgat
ggtcgacattctgatatgtgcagaaactcttttccaaggaagggcttaaccgagcagcag
aaagaaggcatctgtatggtgagaaaattgatgtttgctttagaggaagaaggaggcctg
gatgaaatttacactttcagagagagcctggagcgtctttcaatgtttaagaaaatcgaa
agaagacctatggcttggccttgccagctaactataggttctaatctgtctataaggatt
gtggcatacaaatcactcacagaagagaaggtgaaaaagtcctggactcttgtggatgcc
aagaccttgaaaaaagaagatgtgcaaaaagagactgtctactgcttggatgatgacgat
gaaacagaagttcagaaagatgatcttgttcaagggttctgctatgggagcgatatagtt
cctttctccaaagtagatgaggagcaaatgaaatacaaaaccgaagcaaagtgtttttct
gtactaggattcagcagatcatctcagatccagaggcatcactacatgggcaaccaggtt
ctgaaggtctttgcagcaaaagatgatgaggctgcagcagttgctctttctgccctgatt
catgctttggatgagttggatgtagtggccatagtgcgttatgcttatgacagaagatct
aatcctcaggttggcgtagcctttccatgtatcaaggatgcatatgagtgtctgatatat
gtgcagttaccctacatggaggacttacgacaatacatgttttcctctttgaaaaacaat
aaaaagtacgctcctacagaggatcagttatctgcagttgattctctgattgattctatg
agtttggcttatgaagatgatgatggggagacaaccgaagacctatttaaacccagcaaa
atcccaaaccctcagtttcagaggttgtatcagtgcctgcagcataaagcttttcatcct
gacaagccgctgccacccattgaacagcaccttttggaaatgttggaggtacctcaagag
gtgagagaaaagtgccaggctcctcttgaaaaaataaaggcacttttccccctgaaagat
gccggcaagaagaaagaacagaagactgctcaagatgtcttcaaagacaacaatgaagat
ggacccagtgctaagagggcaaaagctgaaaatgaagaaggcagctttagcatcgcaaac
cttgctgaaggcagtgtcaccactgttggaagtattaaccctgcagaaaacttctgtttt
ctagtgaggcagaagaatgcaaacttcaaggaagtgagccagcagctggtaaaccgcatt
gaacagtttttggaaactaaaggtttacagtactacatgaagagcatcaactgtattaga
gttttcagagaggaggctattaagctggcagaggtgcagtgctttaatgatttcctccag
gccctgaaagaaaaggtggaagacaaaaccttagctgatttctgggagattctgatacaa
gatggaatttctttgatctccaaagatgaagcagaaggtagttcagtgactcatgaggaa
gccaaaaagttcttggcccccaaagaaaaaccagctgaagctccgtcaatggctggtgaa
ggtggtgatgtggatgatttactggacatgatgtaa
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