Caretta caretta (Loggerhead turtle): 125644848 Help Entry 125644848         CDS       T09292                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ccay00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     125644848 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccay00536]     125644848 (COL3A1) Glycosaminoglycan binding proteins [BR:ccay00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125644848 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  125644848 NCBI-ProteinID:  XP_048725386 LinkDB All DBs Position 11:complement(27052229..27121729) Genome browser AA seq 1464 aa AA seqDB search MMSFVQKVTWLILAVFQPSITLAQQDVLGACTHLGQVYADRDVWKPEPCQICVCDSGAVL CDDIICDDQELDCPNPEIPFGECCPVCPQLTPPPGRPTSPPNGVVRGPKGDPGSPGTPGR PGTPGSPGQPGSPGSPGQPGVCQSCPSINGGNFSPQYDSYDTKAGGGGPIYPHAIGGIGA PGPPGLPGPAGQPGPPGTHGYQGSPGEPGQPGPSGPPGPPGLVGPAGSSGKDGEPGRPGR TGERGLPGPAGHKGPPGMPGFNGMKGHRGFDGRDGAKGDSGAPGLKGENGLPGENGSPGP MGPRGPAGERGRPGSPGSAGARGNDGTPGTSGQPGPPGPPGTAGFPGSPGSKGEAGAPGS PGSDGTPGQRGEPGPQGHAGAAGSPGNPGRDGNPGGKGETGPAGIPGAPGLSGARGPPGP AGTNGIPGQRGPSGEPGKNGAKGEPGLRGERGENGIPGAAGPPGEEGKKGANGEPGTNGL PGTPGERGTPGSRGIPGSNGLPGEKGPAGERGGPGIAGPRGAPGEPGRDGGPGLPGMRGL TGSPGSPGHDGKPGPPGNQGESGRPGPPGQSGPRGQPGVMGFPGPKGNEGAPGKNGERGA PGPPGTQGLPGKSGDIGIQGPPGVAGPPGEKGEAGSPGPSGFQGLPGTAGPPGESGKPGE PGQRGENGAPGLPGTKGENGLPGERGPQGAQGSPGARGGTGPPGPEGGKGPAGAPGPPGG TGPPGLQGMPGERGGNGSPGPKGEKGEPGGRGGDGFPGKDGPRGSAGPIGPPGPAGPHGD KGEPGSAGPPGPTGARGGPGDRGEQGPPGPAGFPGAPGQNGEPGGKGERGPGGERGEPGP AGAAGPQGGPGAPGPAGSQGAKGERGAPGSPGSSGFPGARGMPGPPGNNGNPGPPGNVGA PGKDGGPGPAGSTGPAGSPGGAGPKGEPGQPGEKGSPGSRGEMGPPGSPGPSGIVGQRGI VGPPGLAGRPGAPGMPGPKGEDGKPGSNGNPGERGAPGLQGPPGLSGSSGESGRDGNPGS DGLPGRDGSPGPKGDRGENGGPGLPGASGHPGPPGNVGPAGKTGERGHPGSSGPVGPAGP SGARGAPGAQGPRGDKGETGERGSNGIKGHRGFPGNPGSPGPPGPLGPQGANGSPGAMGA RGPPGPAGPPGKDGTSGYPGPIGPPGPRGNRGESGSAGSPGHPGPAGPPGPPGAPGPCCG GGDGIGGLTGEKGPSYYYGDQPSENKVNMNDILSSMKSINSQIENIVSPDGSRKNPARNC RDLKFCHPELNSGEYWIDPNQGCKMDAIKAYCNMETGETCINANPSSVPRKNWWTSSGAE KKHIWFGESMNGGFQFSYGDPELPEDVSDVQMAFLRLLSSRASQNITYHCKNSIAYMDQA SGNVKKALKLMSSTESEFKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVV DIAPMDIGGPDQEFGVDIGPVCFL NT seq 4395 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaagtaacttggctcattcttgcagtgtttcaaccctcaatt actttggcacaacaagatgttttaggggcatgtacacatcttgggcaagtgtatgctgac agggatgtttggaaaccagaaccatgccaaatctgtgtgtgtgactcaggagctgttctc tgtgatgacatcatctgtgatgatcaggaattagactgtcccaacccagagattccattt ggagagtgttgccctgtttgtccacagctaacgccacctcctggaagacctactagtcct cccaatggtgttgtccgaggccccaagggagacccgggttctcctggaactcctggcaga cctggaacacctggctcccctggacaaccaggcagtcccggctctcctggccagcctgga gtctgtcagtcatgtccctctataaatggaggaaatttttctcctcagtatgactcctat gataccaaggctggtggtggtggacccatatatccacatgctattggtggtataggagcc cccggcccacctggcctgcctggcccagctggtcaaccaggcccacccggtactcatgga taccaaggttcccctggtgagcctggacaacctggcccttctggacctccaggaccccca ggattagtaggcccagctggttcctcaggaaaagatggagaacctggaagaccaggcaga actggagagcgtggattacctggacctgcgggccacaaaggaccccctggtatgcctgga ttcaatggaatgaaaggtcacagaggctttgatggaagagatggtgccaaaggcgatagt ggtgctcctggtctgaagggtgaaaatggtcttcctggagaaaatggatcacctgggcca atgggtccaagaggtccagctggtgaaagggggagaccaggatctcctggttctgctggt gcccgtggtaatgatggtactccaggaacatctggacaacctggtccccctggccctcca ggaactgcaggatttccaggctctccaggttctaagggtgaagctggtgctcctggttcc ccaggctctgatggtacccctggacaaagaggagaacctggtccacaaggtcatgctggt gcagctggttctcctggcaatcctggaagagatggaaacccaggtggtaaaggtgaaacg ggccctgctggtattcctggtgctcctgggttgagtggagcccgtggccctcctggtccc gcaggtaccaatggaattcccggacaaagaggcccgtcaggtgaacctggtaagaacggt gcaaaaggagagccaggcttacgaggagagcgtggtgaaaatggtattccaggtgctgct ggtcctcctggcgaagaaggcaaaaagggtgctaatggtgagccaggcacaaatggttta cctggaacaccaggagaaaggggtaccccaggttcccgtggcatacctggtagtaatgga cttcctggagaaaagggtcctgctggtgaacgtggtggtccaggcattgcaggtccaaga ggagctccgggagaacctggacgcgatggtggccctggtcttccaggaatgagaggtttg acaggaagtccaggaagcccaggacatgatggcaaacccggccctccaggtaatcaggga gaatctggccgacctggtcctccaggccaatcaggtccacgaggtcaaccaggtgtgatg ggtttcccaggtcctaagggtaatgagggtgcgccaggtaagaatggagaaagaggtgcc cctggaccccctggcacacagggtcttcctggaaagagtggtgatattggcatccaaggt cctccaggagtcgctggtcctcctggtgaaaaaggagaggcgggatctccaggtccatct ggcttccagggattacccggtactgcaggcccacctggagagagtggaaagcctggagaa ccaggacaaagaggtgaaaatggagcccctggactcccaggtactaagggtgaaaatggt ctcccaggtgaacgtggtccacaaggtgctcaaggttcccctggagcaagaggtggaaca ggtcctcctggcccagaaggtggcaagggtcctgctggtgcgcctggcccccccggtggt acagggccacctggtttgcaaggaatgccgggagagagaggaggtaacggaagtcctgga cccaaaggagagaagggagagcccggtggcagaggtggtgatggcttccctggtaaagat ggaccaaggggatctgcaggtcccattgggcccccaggtccagctggcccacatggagat aagggagaacctggttcagctggaccccctggtcctacaggtgcccgtggtggtcctggt gatcgaggtgaacagggcccccctgggcctgctggcttccctggagcccccggacaaaat ggggaacctggtggaaaaggagagagaggccctggtggtgaaagaggtgagcctggtccc gcaggagctgcaggtcctcaaggaggccctggtgcaccaggtccagctggttcccaagga gcaaaaggagagcgtggtgctccaggcagccctggttcatctggtttcccaggtgccaga ggcatgcctggtcctcctggtaataatggcaatccagggccacctggtaatgttggagct cctggaaaagatggtggtcctggtccggcaggtagcactggtccggctggtagccctgga ggtgctggtcctaaaggtgagcctggccaaccaggtgaaaaaggttcaccaggttcaaga ggagaaatgggtccaccaggtagtccaggcccctcaggtatagttggtcaacgtggtatt gtgggacctccaggccttgctggcagaccaggtgctcctggcatgcctggcccaaagggt gaagatggtaaaccaggcagcaatggtaatccaggagaacgtggagctccaggtctacaa ggtcctcctggtctaagtggctcatctggagaatctggcagagatggtaaccctggatca gatggcttgccaggtcgtgatggatccccaggacccaagggcgatcgtggtgaaaatggt ggcccgggtttacctggtgcctctggtcatcctgggcccccagggaacgttggtccagct ggaaaaacaggtgaaagaggacatccgggttcttctggtcccgttggccctgctggtcct tctggtgctcgtggtgctccaggtgcccaaggtcctcgtggtgacaaaggtgaaactggt gagcgtggcagcaatggcattaagggtcatagaggatttcctggtaacccaggttcccct ggtccccctggtcctctgggtccacaaggtgcaaatggaagtccaggagctatgggagcg agaggtccccctggcccagctggtcctcccggaaaggatggtacgagtggttacccaggt cccataggtcctccaggccctcgtggtaatcgaggtgaaagtgggtctgcgggttcacct ggccacccaggtcccgcgggtccccctggacctcctggggctcctggtccatgctgtggg ggaggtgatggcattggtggtttaactggtgaaaaaggaccatcatactactacggagac cagccatctgaaaacaaggtcaatatgaacgacatcttatcttcaatgaaatcaattaac agccaaattgaaaacatcgttagccctgatggctcccggaagaacccagctcgtaactgc agagacctgaaattctgccatcctgaactcaacagcggagagtactggattgatcctaac caaggttgcaagatggatgcaataaaagcatactgtaatatggaaactggtgagacatgc atcaatgctaatcccagcagtgtgccacgtaaaaactggtggaccagttcaggagctgaa aagaaacacatctggtttggagagtctatgaatggtggcttccagttcagctatggagat ccagagcttccagaagatgtttcagatgtgcagatggcattccttagattgctctctagc cgcgcctctcagaatatcacttatcactgcaagaacagcattgcttatatggatcaggcc agtggaaatgttaagaaagccctgaaactgatgagttccactgagagcgagttcaaggct gaaggaaacagcaaattcacatatgccgttctggaagacggctgtactaagcacactgga gaatggggtaaaacagtctttgaatacagaacacggaagacaatgaggttgcctgtggtg gatattgctcccatggatattggtggtcctgatcaggaatttggtgtggacattggccca gtctgtttcttataa

DBGET integrated database retrieval system