Caretta caretta (Loggerhead turtle): 125645070
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Entry
125645070 CDS
T09292
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125645070 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125645070 (HDAC4)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125645070 (HDAC4)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125645070 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
125645070
NCBI-ProteinID:
XP_048725967
EnsemblRapid:
ENSCECG00000012879
LinkDB
All DBs
Position
11:complement(4489756..4965514)
Genome browser
AA seq
1091 aa
AA seq
DB search
MSVCACACESVTKQKTSLIHLRLKLTLHPKCNKVDVNTALPLQVAPTSVPMDLRLDHQFS
MPVTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEM
LAMKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEF
VLNKKKALAHRNLNHCISNDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDD
FPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGS
GPSSPNNSSNNISAENGITGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLGL
PATGPASGGSGQQDAERLAIPTLQQRLSLFPGTHLTPYLSTTTLERDGGTSHNSLLQHMV
LLEQPTAQTPLVTDWYLSGLGPLPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQN
AQALQQLVIQQQHQQFLEKHKQQFQQQQLHINKMIPKPNEPARQHESHPEETEEELREHQ
ALLEEPYSDRVSSQKEMQGLANMVQVKQEPLESDEEETEPPPELEPGQRQAEQELLFRQQ
ALLLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFT
TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQT
VHSEAHTLLYGTNPLNRQKLDSKKLLGSITSMFVRLPCGGVGVDSDTIWNEVHSSGAARL
AVGCLIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK
ILIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMA
FTGGLEPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCF
GYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPENVLQQRANANA
VHSMEKVIEIHSKYWHSLQRYSSTVGYSLIEAQKCETEEAETVTAMASLSVGVKPSDKRP
DDEPMEEEPPL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctgtgcatgtgcgtgtgagagtgtcacaaagcaaaagactagtttaatacat
ctgcgtttgaagttgacattgcacccaaagtgtaacaaagttgatgtgaacacagcactg
cccttgcaagttgcaccaacttcggtccccatggatctccgcttggaccaccagttttcc
atgccagtgacggaacctacactccgagaacagcaactccagcaggaactcctggctctc
aaacaaaaacaacaaattcagagacaaatccttatagctgagttccagaggcagcatgag
caactttcccgtcagcatgaggctcagctacatgaacatataaaacagcaacaggaaatg
ctagcaatgaaacatcagcaggagctcttggagcaccagagaaagttggagcaacatcga
caggaacaagagctggagaagcagcatagagaacagaaactacaacagctaaaaaacaaa
gagaaaggaaaagaaagtgcagtggcaagcacagaagtaaaaatgaaattacaagagttt
gtcttaaataaaaagaaagctttggcacaccggaatctcaaccattgcatttccaatgat
ccccgcttctggtatgggaaaacgcagcacagttctcttgaccagagttcccccccacaa
agtggagtatcaggcacctacaatcaccctgtactggggatgtacgattccaaagatgac
tttccactccgaaaaacagcatctgaacccaacctgaagttacgatccagattaaagcag
aaagttgctgaaagacggagcagtcccctgttacgcaggaaagatggcccagtggttact
gctctgaagaagcgtcccctggatgtcacagactctgcatgcaacagtgctcctggatct
ggtcccagttctccaaacaacagctctaataatataagtgctgagaatggaattacagga
tcagtcacaagtattcaagcagagaccagcctggctcacagactagtgaatcgtgaaggc
tcagtaacacagcttcctctgtacacatctccttccttgcccaacataacgttaggcttg
cctgcaactggacctgcaagtgggggatcaggacagcaggatgccgagagacttgctatt
ccaaccctacaacagcggctttccttatttcctggcactcacctcactccttacttgagc
actacgacgttggaaagggatgggggaacttcacataactctcttctgcaacacatggtc
ttactggaacaaccaactgcacaaactcccttagtcacagactggtatctttcaggcttg
gggccactgcccctccatgcacagtctctggttggtgcagatcgggtctccccctcaata
cacaaactccggcaacaccgccccttggggcgcacgcagtctgctccccttccccagaat
gcccaggccctccagcagttagtgatccagcaacagcatcaacagttcctggagaaacac
aaacagcaattccagcaacagcaacttcacattaacaagatgataccaaaaccgaacgag
ccagcccgccagcatgaaagccaccctgaggagacagaagaggagttacgagaacaccaa
gcgcttttggaggagccatacagtgaccgagtctcaagccaaaaggagatgcaagggttg
gccaatatggtgcaggtgaagcaagagccccttgagagcgatgaagaggaaacagagcca
ccaccggaactagagccagggcagaggcaagctgaacaggagctgctcttccgtcagcaa
gcccttctactggagcagcaacgcattcaccagctgagaaactaccaggcatcaatggag
gcagctggcatcccagtgtcttttggaggacatcggcctctgtctcgtgcacagtcctca
cctgcatctgccaccttccccatgtccgtacaggagccacccactaagccaaggttcaca
acaggccttgtctatgacaccttgatgctgaaacaccagtgtacctgtggaaacacaaac
agccacccagagcatgcagggagaatccagagcatctggtcccggcttcaagagacaggc
ctccgtggcaagtgtgagtgtattcgtggaagaaaagcaactctagaagagctacagaca
gttcactcggaggcgcatacgctgctgtatggcacaaaccctttgaacagacagaaactg
gacagcaagaaacttctaggttctataacatcaatgtttgtcaggctcccttgtggtggt
gttggagttgacagtgacacaatttggaatgaagttcattcatctggtgctgctcgcctg
gctgtgggctgtctcattgaacttgtttttaaagtggccacaggagaattgaagaatgga
tttgctgttgttcgacctccaggtcatcatgctgaagagagtacacccatggggttctgc
tattttaattcggtggcaattgcagccaagcttctccaacagagactcaacgttagcaaa
atccttatagtggactgggacgtgcaccatgggaatggtactcagcaggctttctacagt
gatcctaacgttctttatatttcactacatcgctatgatgatggaaacttcttcccaggc
agtggagctcctgatgaggtcggcacaggaccaggagttggtttcaatgttaatatggcg
ttcactggtggcctcgaaccaccgatgggagacacagaatatttgactgctttcagaacg
gtagtaatgccaattgccaatgaatttgccccagatgttgtgctggtgtcatctggtttt
gatgcagtggaaggccatcctacacctcttggaggatataatctatcagcaaaatgcttt
gggtacctgacgaagcagctgatgggattggccggaggtcgaattgttctggccctcgaa
ggaggtcatgacctgacagccatttgtgatgcgtctgaggcatgtgtttctgctttgctg
ggaaacgagcttgatcctcttccagaaaacgtcttgcagcagagggcaaatgccaatgca
gtgcattccatggaaaaagtaattgagatacacagcaagtattggcattctctccagcgt
tactcctccacggtggggtactccttgatcgaggcacagaagtgtgagactgaagaagca
gaaacagtaacagccatggcatctctgtcagtgggcgtgaagccatctgacaagagacca
gatgatgaacccatggaagaggagcctcccctgtag
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integrated database retrieval system
