Caretta caretta (Loggerhead turtle): 125645083
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Entry
125645083 CDS
T09292
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125645083 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125645083 (CLASP1)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125645083 (CLASP1)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125645083 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
TOR1L1_N
HEAT_EZ
Sec7-like_HUS
HEAT_2
RTP1_C1
Cnd1
Adaptin_N
HEAT_DAAF5
PDS5
ParcG
MMS19_N
MMS19_C
TPR_20
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
125645083
NCBI-ProteinID:
XP_048726001
LinkDB
All DBs
Position
11:66727748..66999567
Genome browser
AA seq
1576 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGMDILSALVSRLQDRFKAQIGTVLPSLLDRLGDAKDSVREQDQALLLKIME
QATNPQYVWDRLLGGFKHKNFRTREGICLCLIATLNVSGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQGAGDKN
FDDEDSVDGNRPSSASSSTSSKAPPNSRRVGMGTARRLGSAALGSKSTAAKEGAGAVDEE
DFIKAFDDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKRIRSLLLAGAAEHD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSLVLGNKFDHGAEAIMPTIFNLIPN
SAKVMSTSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHNHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DIDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLDGTTTKPEGRIRTRRQSSGSATS
VTSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSAYGGLTSGTARVPPVP
SSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFP
PLASRRHSRSTSALSTADSVGQSDRFGLGQPGRMPASVNAMRVLSSSTDLEAAVADALLL
GDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLN
HCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVD
FIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFI
VDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAA
QIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRH
SSSRTSPLTSPTNCSHGGLSPSRFWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYSP
SMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDVSRDGGIAAP
ASDVRGSSDVMEGGRMALDNKTSLLNTQPPRAFSGPRARDYNPYPYSDTINTYDKTALKE
AVFDDDMDQLRDEVSIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVWEE
HFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKE
VVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQLL
PDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQ
TTNSNSSSSSDVSTHS
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtattgcttagcacaggtgcttcagaaagacgttggaaagaga
cttcaggttggccaagagttgatagattatttctcagataaacagaagtctgctgatctt
gaacatgatcagactatgctggataaaatggttgatggacttgccacctcttgggtaaat
tccagcaattacaaggtggttctgctggggatggacatcctgtctgcactagtgtcacgg
ttacaagatcgctttaaagctcagataggcacagtgttgcccagtttacttgacaggctg
ggagatgctaaagactcagtgcgggagcaggatcaggctctgctactaaaaattatggaa
caagctactaatcctcagtatgtgtgggacagactgttgggaggattcaaacacaagaat
ttccggacgagagaagggatttgcctctgccttattgcaaccctcaacgtatccggagct
cagagtttaacactgagtaagattgtgccacatatatgtaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagcctagtggaaatttacagacatgtaggtgaa
cgtgtaagggcagatctcagtaaaaaaggattaccacagtctcggttgaatgtaattttt
acaaaatttgatgaggtccaaaaatctggaaacatgatccagggtgcaggtgataaaaat
tttgatgatgaagactctgtggacgggaacagaccttcctcggccagctcctctacatct
tcaaaggcccctccaaactcccgcagagttggcatggggactgctcgcagacttgggtct
gcagctctgggctcaaagtccacagcagccaaagagggagctggtgctgttgatgaggag
gattttattaaagcgtttgatgatgtcccaacagttcagatttattccagccgagacctc
gaagaatccataaacaaaattagggaaatcctatcggatgataagcatgactgggagcag
agagtgtctgcactgaaaaggatccgatccttactattagctggagctgccgagcatgat
aacttctttcaacacttacgcctgctggatggagcatttaaattatccgctaaagatctg
cggtctcaggtagtgcgagaggcgtgtatcacgttgggacatttgtctttagttttggga
aacaagtttgaccatggggcagaagccatcatgccaacaatctttaatctgattcctaac
agtgccaaagtaatgtccacttctggtgtcgtagctgttagattaatcatccgacatacg
cacatccctcgactaatacccatcataaccagtaactgtacctccaagtctgttgcagtt
agaaggcgctgctttgaatttttagacttgctgttacaggagtggcaaacacactcccta
gaaagacacatctcagtattagcggaaacaataaagaagggaatccacgatgcggactct
gaagcaaggatagaggcaagaaaatgttattggggcttccacaatcacttcagcagagaa
gcagaacacttgtatcacacgttggaatcctcctatcagaaagccctgcagtcacacttg
aagaactcagatagcatagtgtccctgcctcagtccgatcgctcgtcctccagttcccag
gagagtctcaaccgtccattgtctgccaaaagaagtcctactggaagcactacatccaga
gcctctacagtgagtacaaaatccgtgtcaaccccaggatctctgcagcggtctcgcagt
gacatcgatgtgaatgcagcagctagtgccaagtcgaaagtaacatcttctggagcttcc
acccctttcagttccgcggcagccctgcccccaggctcgtacgcatcactagatggtact
accactaaacctgagggtcggatccgtacgaggaggcaaagctctggaagtgccacaagt
gttacctcaacgcctgccgatacccgaggccgcagccgtgctaaagtagtttcacagtcc
cagcgatccagatcagctaatcctgctggtgctggcagccggtctagttcccctggcaag
ctgttgggaagtgcatacggtggactgaccagtggaacagccagagtcccaccagtgcca
tcatcctcagagaaacgcagcaagatccctcgaagtcagggatgcagccgagagacaagc
cccaacagaataggactagcacggagcagccgtatcccccgacccagcatgagtcagggg
tgcagccgcgataccagccgtgagagcagtcgagatacaagccctgctcggggcttccct
ccacttgcttctcgacgtcattccaggtccactagtgctctctccactgctgattctgtt
gggcagtcagaccggtttggacttggacagccaggcaggatgcctgcttctgtgaatgcc
atgcgagtcctgagctcaagcacagatctggaggctgctgtggctgatgcactgctgtta
ggagactccaggagcaagaaaaagccagtgagaagaagatatgagccgtatgggatgtat
tctgatgatgatgcgaatagcgacgcatcgagtgcttgctccgaacgctcatatggttcc
aggaatggaggcattccacactacctacgacagactgaagatgtggctgaagtcctaaac
cactgtgccagttccaactggtcagagagaaaagaagggctcatcggccttcagaattta
ttgaagagccagaggacactgagccgagtggagttaaaacggctgtgtgagatctttacg
cgcatgtttgctgaccctcacagcaaggttttcagcatgtttctagaaaccctggtagat
ttcatcatcatccataaggacgacttgcaagattggctctttgttctcctgacgcagtta
cttaagaaaatgggagcagacttgctaggatctgtgcaggcaaaagttcagaaagctctg
gatgtaacaagggattcttttccatttgatcagcagtttaatattttgatgagatttatt
gtagatcagacccaaacaccaaacctcaaggtaaaagttgcaattctgaagtacattgag
tccctggcaagacagatggacccaacagactttgtgaactccagtgagaccagacttgct
gtgtctagaatcataacttggacaacagaaccaaagagctcagatgtaagaaaggcagca
caaatagtcctgatttcactgtttgaactgaacactcctgagtttaccatgttacttggt
gccttgccaaaaacattccaagatggtgctaccaagctcctacacaaccacctcaagaac
tccagtaacactagtgtgggttctcctagcaatactattggtcggacaccttcacggcat
tctagcagcaggaccagccccttaacttcccctaccaactgttcccatggtggactgtct
ccaagtcgtttctggggttggagtgcagatgggctgtcgaagcacccccctcccctttct
cagcctaactccatccccactgctccttcccacaagactttcagacgctcttactcgccc
agcatgctggattatgacacagagaacctaaattccgatgaaatctacagctctcttcgt
ggagtcacagaggcaattgaaaagtttagtttccgtagtcaagaggatctgaatgaacca
atcaagcgtgatgggaagaaggactgtgacgtgtctcgagatggtggaatagctgcacct
gccagtgatgtacggggaagcagtgatgtcatggaaggaggaaggatggctctagataac
aaaacctctctacttaatactcagcctccacgcgccttttcagggccccgagcccgagat
tacaacccctacccttattcggacacaatcaacacctacgacaagactgccttaaaagag
gctgtgtttgatgatgatatggatcagcttcgggatgaagtatccattgatcattccgat
ttggtggctgatcttctgaaagaactgtccaaccacaatgaacgggtggaagaacggaaa
ggagccctgcttgagctactgaagatcacgcgagaagataacctgggagtttgggaggaa
catttcaaaaccattttgctcttgctgctagaaacacttggagacaaagatcattcaata
agagccctggctttaagagtattgcgggagatcttaagaaatcagccagcaaggtttaaa
aactatgcggagctaaccatcatgaaaacactggaagcacataaggattcccacaaagag
gttgtcagagctgctgaggaagctgcttccaccctggccagttccatacaccctgaacag
tgcatcaaagtgctctgccccatcattcaaactgctgactaccccattaatctagctgcc
atcaaaatgcagacaaaagtcattgaaaggatttcaaaagaatctttacatcagctcctt
cctgatatcatccctggattgttacagggctacgataatacagagagcagcgttcgcaaa
gccagtgtgttttgcctagtggcaatttattcagtaattggagaagaactgaaacctcat
cttgcacagctcacaggaagcaagatgaagctactaaacttgtacataaagagggcccag
accaccaatagtaacagcagctcatcttcagatgtctcaacgcacagttaa
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integrated database retrieval system
