Caretta caretta (Loggerhead turtle): 125645256
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Entry
125645256 CDS
T09292
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125645256 (CHD9)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125645256 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
125645256
NCBI-ProteinID:
XP_048726481
LinkDB
All DBs
Position
12:complement(13178078..13369814)
Genome browser
AA seq
3025 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
TQQKMSEFEQLNQYDSLKLQVNQSFSSPADSVLSPHTQFNCSPIHPQNQSNGMFPDVADG
SPMWGHQTNTTVPNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEQQHQCASLQSRQS
RNNMNTGQDSLNQPKNFMEVNVSAPRRVSVTHPPQIANPSTSQQPLSVQQFSQNASASIH
FCGNQEGNFDGQSPTMTPCSVNNTQRFPSPYSYSNNHISPTSLLQSSTALSTSQQTHPLS
DYTGSDAFTSQTGTKQETTEHLLNPNTPLNSNSFQMLHSAHSQGSFSSSKLSPVNINFPA
SAGSASQISHFSDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDTSSHILEHDLEHHITPQQITQSSDIARTESQSQMHPWHSSVSNRHLQDRNRIALQGQ
PPSSKKTDVSGTYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPSVSAEGREEKKGRKIKSKPKDKESKKTKTGSSSKIKDKTKIGKLIITLG
KKQKRKNESSDEMSDTKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSV
KIKKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISAGMTMEEEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVS
FCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEDFEQLQASRPDSRRLDRPPP
NSWKKLEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRI
IRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKV
LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFRETYIPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNS
LVIDTPRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNL
LVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTED
GQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKH
HCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASEVDVWVPEPEHSEVPAEWWDADADKS
LLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPA
MFKDDMEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQ
QIQPTFPVQATVMQPPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPDGG
RFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPTIFIQPITEERAS
RTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRT
DYHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLAPQSRLPDTKGNAL
EDTKVKNENLKEDPQSSEEESMSTEETRTMMKSEPLSPKNGTPLQTTDHKPGVKTETDRR
MVAARTEPLTPNPASKKQRVNKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSQS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDDEEAQKRAEGTPHIKAYDEESV
ASLSTTQDETQDCFQLNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKW
PSARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPTAGVKEEHDQSPQMPKVKKHV
REKEFTVKINDEGGLKLTFQKQGFSQKRLFESEEGTLGQQQYLARLRELQNASETSLVNF
PKSLPESGASNQLTVNANGVMVDSQPVVKKRRGRRKNVEGVDILFINRNKPPNHVSPGIN
TSQVAPVINPTLTYAQSQGLLDEESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYV
EDLGAFIPTPYHGKHGARSAHRHCCCCEHCKHLVHYPRVYAERAKRRQHKEDFDEDMDTD
IPESTGCGNWDIMAAGGLVDTVEHRFWARQTSTDWWNHIVLQPSVVWAVLWSGVAGCPER
ALLTPPFLGIWVRRIWNFRRKRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRR
NARKVGGAFAPPLKDLCRFLKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEV
SRRGRRPKSEIAKATAAAAAAATAANVSVNPLLANGLLPGVDLSTLQALQQNLQNLQSLQ
VTAGLMGMPAGLTTGGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGND
SKEPVVKKERTENQHADNGGEDSVSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLN
LHIPALSQSNIFDVQNAENNDTGSAKPTEEKEKNSRVRDQEDKGGTEPSSHNENSTDEGS
EKADASSGSDSTSSSSEDSDSSDED
NT seq
9078 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagcgagacgttagaa
ggtttgtcggatgatgcctttgtacaacctggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgagcctttgcacatagactcattgaaccatgtgcaagatactcaa
actcaacaaaagatgagtgaatttgagcagttaaatcagtatgattcattgaaacttcaa
gtaaatcagtctttcagcagtccagctgacagtgttttatcaccacacactcaatttaat
tgctcaccaatccatccacaaaaccaatccaatggaatgtttcctgatgtggctgatggt
agtcctatgtggggtcatcaaactaacacaactgttccaaatcaaaatgggtcccctttt
caccaaggacattctcagtctatgcagcaaaataaaagttttgtagcacaccatgacttt
gccttatttcaggccaacgaacagcagcatcagtgtgcctcactacagtctcgacaaagc
agaaacaacatgaacacagggcaagactctctgaatcagccaaaaaactttatggaggtt
aacgtatctgctccacgcagagtcagtgttactcatccacctcaaattgctaatccatca
acttcacagcagcctctctctgttcaacagttttctcaaaatgccagtgcttcaatacat
ttttgtgggaatcaagaaggaaactttgatggacaatctccaactatgactccttgctct
gttaataatacacagcggtttccttctccatattcttactctaataaccacatttctcct
actagccttttacagtcttctaccgctctttctactagccaacaaactcatcctttatct
gattatactggaagtgatgcctttacatctcaaacagggaccaagcaagaaaccaccgag
cacctcttgaatcctaacacacctttgaattcaaatagtttccagatgttgcattcagca
cattctcagggcagcttcagtagttcaaaactctctcctgtgaacattaattttccagcc
tctgcgggttctgcttctcagataagccatttcagtgatcctatagaaagcaatggtttt
tcatctttggatgagaacttacttcatcaagttgagtctcaagctgaaccatttacagga
cttgatccagaggacctccttcaggaagacctcctaccccaatttgatgattcagcattt
gttcaggacacttcaagccacatattagagcatgacctagaacaccatattaccccacag
caaataacacagtcatcggatattgctcggacagagtctcaaagtcagatgcatccctgg
cattcttcagtttctaatcggcatctacaagatagaaatcgtatagccttgcaagggcag
cctccttcctccaagaagactgatgtttcagggacatatactaaattgcagaatacccag
gtgagggcaatgtcggaaaagaaacagaagaaaaaagtagaatcggaaagtaagcaggag
aaggctaatcgcataatatcggaggcaatcgcaaaagcaaaagagagaggggagagaaac
attccacgagtaatgagccctgaaaactttcccagtgtttcggctgaaggaagagaggaa
aagaaaggtagaaaaattaaatccaaaccaaaggacaaggagagcaaaaaaactaaaact
ggttcctcatccaaaattaaagacaaaacaaaaattggcaagcttataatcacattgggt
aaaaagcagaagagaaagaatgagtcttcagatgaaatgtctgatactaagcagactcca
cagcggtcatttaaagatgaggactctcagaagagaagatcaaatcgtcaagttaaaaga
aaaaagtatgctgaagaaggagaaggaaaacagtcagaggaagaggctaaagtttctgtg
aaaatcaaaaagagttctgctcctttgcctgctgagcaacccttacaattatttgtggag
aatccaagtgaagaagatgcagcaattgtagataaaattttatcctccaggatagtgaag
aaagaaatatctgctggaatgacaatggaagaagaagaattttttgtaaaatacaagaac
tactcctatcttcactgtgaatgggccacagaacagcagcttttgaaggataaaagaatc
cagcagaaaattaaacggttcaagctgaggcaagcacaaagagcccacttttttgcagat
atggaagaagaaccttttaatcctgactatgttgaagtggaccgggtgctagaagtctcc
ttttgtgaagataaggacactggtgagcctgttatttactacctagtaaaatggtgttca
ttgccatatgaggacagcacctgggagttaaaagaagatgtagaccaggcaaaaatagaa
gattttgaacaactgcaagcttccaggcctgattcaaggagattggaccgacctcctcct
aactcctggaagaagctagaacagtccagagaatataaaaatggcaaccagcttagggaa
taccaactggaaggactcaactggctccttttcaactggtacaatagacgaaactgcatt
ttagcagatgaaatgggtcttggcaaaaccatccagtcaattacattcctctatgaaatc
ctcctgactggtatacgagggcctttcctgatcatagctccactttccactataaccaat
tgggaaagagaatttcgcacatggactgatcttaatgtcgtggtatatcatgggagcatg
gttagcaggcagatgatacagcagtatgagatgtacttcagggactcacaggggcgtatc
attcgaggtacttaccggttccaagctattatcaccacttttgaaatgattcttggtggc
tgtccagaactcaatgcaattgaatggcggtgtgttattattgatgaagcgcacaggctg
aagaataaaaattgcaaacttctggagggactcaaactcatgaatcttgagcacaaagtg
ctgttgacaggcacgccactgcagaacacagtagaagaactgtttagcctccttcatttt
cttgaacctttgcgttttcctgctgaatctacattcatgcaggaatttggggaccttaaa
acggaggagcaggtgcaaaagttacaagctatcctgaaaccaatgatgctgagacggttg
aaggaagatgtagagaaaaagttagctcccaaggaagaaactataattgaagtagaacta
actaatatccagaagaaatattatcgggcaattttggagaagaactttgcattcttgtca
aaaggagctggccaagctaatgtacccaatctagttaacactatgatggaactcagaaag
tgctgcaaccacccttatcttatcaaaggtgctgaagagaaaatccttggggagtttagg
gaaacatatatcccaactgctcctgattttcatctacaagcaatgatccagtctgctggt
aaattggtcctcattgataaacttcttccaaaaatgaaagcaggaggccataaggtgctt
atcttctctcaaatggtgcgctgtcttgacatccttgaggactaccttatacataaaagg
tacttatatgaaagaattgatgggagagtgagaggaaatctgaggcaagctgctattgat
cggtttagcaaaccagactctgatcggtttgtgtttcttctgtgtaccagagctggtgga
ttaggcattaatttgactgcagctgatacatgtataatttttgattctgactggaatcct
cagaatgatctccaggcccaagcccgttgtcacaggattggtcagaacaaagcagtaaag
gtctacagattgataactcggaactcatatgagagagagatgtttgacagagcaagtctg
aaattgggtctggataaagctgtcttacagagcatgagtggaagagaaaatagtgttggt
ggtatccaacagctttccaaaaaagaaatagaagacctgcttcgaaggggtgcctatggt
gctattatggatgaagaggatgagggctctaaattctgtgaagaagacatagaccaaatc
ttgcagcgccgtacgaaaactatcacaattgaatccgaaggaaggggttcaacgtttgcc
aaggctagttttgttgcatctggaaatagaactgatatttcattagatgatcctaacttc
tggcagaaatgggccaaaaaagcagaaatagatatagatgccatcagtggtagaaacagc
ctggttattgataccccaagaattaggaagcaaacaagaccctttagtgccacaaaagat
gagctggctgagttatcagaagcagagagtgaaggggatgataaaccaaaactccgcagg
ccttgtgaccgctctagtggatatggaagaacagagtgctttcgggtggagaaaaactta
ttagtctatgggtggggtcgttggagagagattttgtcacatggtcgcttcaagaggcaa
ctaaatgaacaggacgtggagataatttgccgagcactcttagcatattgccttgttcac
tacagaggagatgaaaagataaaaagttttatatgggatctcatcaccccaacagaggat
gggcaaacacgagagctgcagaatcatctaggtttgtcagcacctgtgccgaggggtaga
aaaggaaagaaagtgaagactcaggctagcacttttgatatacataaagcagaatggctt
cgaaaatataatccggaacatctactgcaagatgaaggatataaaaaacacataaagcat
cactgcaataaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcatt
ggtaatgaatgccaaaaagtgtttgatggagttgatgccagtgaagttgatgtttgggtc
cctgagccagagcattctgaggtccctgcagagtggtgggatgcagatgcagataaatcc
ctcctaattggagtttttaagcatgggtatgaaaagtacaacactattagagcagatcct
gcactgtgtttcttggaaagagtgggcaaaccagatgagaaagcagttgctgctgaacag
agagcaaatgattacattgatggggatgtagaagatccagaatataaaccagccccagca
atgtttaaagatgatatggaggatgatgcttcatcaccaggagatctagtaatagctgac
ggagacggtcagatgatggaaggagacaaaatttattggcccactcagtctgctttaaca
acacgtctgcgacgcctaataacagcctaccaacgtactagtaagaacaggcaggcccag
caaatccaaccaacgtttccagttcaggccactgtgatgcagcctccatatgaagaagct
gctctaaatccaaaaattgctgccaagattgaaaggcaacaaagatggacgagaagagaa
gaagctgatttttacagggttgtatccacatttggagtggtgtttgatcctgacgggggt
cgatttgactggacaaaatttagagccatggctaggctacataagaaaactgatgagagt
ttagagaagtacttgtatgcttttatgtctatgtgcaggagagtctgtcgccttccctca
aaagaagaacttgtagacccaaccatttttatccaaccaattactgaggagcgtgcttct
cggaccttatatcgcattgaactcttgaggaaggtacgagaacaggctctccgacatcca
cagctgtttgaacgcttgaaactttgtcagccaaatccagacttgccagtctggtgggag
tgtgggactcatgacagggatttacttattggagctgctaaacatggggttagcagaaca
gactatcacattcttcgtgatcctgaactctcatttatgtctgcccagaggaactacagt
cagaataaagtggcactatcaagaacttctactccacttttacatcagtatcagatggca
ttgtctgcttctcctcttgcacctcagtcaagattgccagatactaaagggaatgctctt
gaggatacaaaagttaaaaatgaaaaccttaaagaggaccctcagtcgtctgaagaagaa
tctatgtctactgaggaaacacggacaatgatgaaatctgaacctctgagcccaaagaat
ggcacgccattacagactacagaccacaaacctggcgtgaaaactgaaactgataggcgt
atggttgcagcaaggacagagcccctaactccaaaccctgcttccaaaaaacagagagtc
aacaaaagagggtcagactctagctctgattctgactctgattcagacagatcatcctgt
tcttccaggtcatcttcatcatcctcttcctcttcctcttcttgttcacgctcccaatca
ggatccagctcttcttcatcctcatcttgttcgtcagcatcttcctcctcttcatcatct
tcatcttcatcatcgtcgtcatcatcgtcgtcatctgaagagagtgacagtgatgacgaa
gaggcacaaaagcgagcagaaggaacccctcacatcaaagcatatgacgaagagagcgta
gcctctctgagcaccacacaagatgagacccaggactgtttccagttgaacaacgggacg
ccaaattccagctatctcttgcaaggtggatacatgttggctgcatcctattggccaaag
gatcgagttatgattaaccgactagacagtatttgtcaaacagtgttgaaaggtaaatgg
ccttcggcaagaagaagctatgacagcaatacagtagcatctttctacacaaccaaactt
ctggacagcccgggtgcagctgcagactacagcgaacctagtgcaccaactcccccaact
gcaggtgttaaggaagaacatgatcagtcgccacagatgccaaaggtgaagaagcatgta
cgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaagttgacttttcag
aagcaggggttttctcaaaaaaggctgtttgaaagtgaagaaggcacgttaggacagcag
caatacctggctcggcttcgtgagctccagaatgcttcagagaccagccttgtcaatttt
ccaaaatccttaccagaatcaggtgcttccaatcagttaacagttaatgctaatggagtg
atggtcgacagccagcctgtagtcaaaaagaggagaggaaggaggaagaatgtagaagga
gttgacatcctctttataaatagaaataaaccacctaatcatgttagtccaggcattaac
acctcgcaagttgctccagtaataaacccaacacttacttatgctcagtcccaaggtcta
cttgatgaagaaagcccagttcctgtcattaacctgaaagatggaacaagactggcaggt
gatgatgcaccaaaaaggaaggatttagaaaaatggcttaaggaacatcctggttatgtt
gaagatttaggagcttttattcctacaccataccatggcaagcatggagcccgctcagct
caccgtcactgctgctgttgtgagcattgtaaacacctcgtgcattatcctagagtatat
gcagaacgggctaagagacgccagcacaaggaggattttgatgaggacatggacacagac
attcctgaaagcacgggctgtggcaattgggacattatggcagcagggggactggttgat
acagtggaacaccgattctgggccaggcaaacaagcacagactggtggaaccacatagta
ttgcagccttctgttgtttgggccgtcctctggagtggagtggctgggtgcccggagcgc
gccctcctcacccccccattcttgggcatctgggtgaggcggatatggaacttcagaagg
aagagaatgcagcttcatgatgggaggcccaaacaaaaaaggcaccgttgtcgaaaccct
aataaactggatgttaatagtctcactggtgaagaacgtgttcagctgatcaatagaaga
aatgctagaaaggtgggaggtgcttttgctccaccgctgaaggacttgtgcagattcttg
aaagaaaatcctgagtatggagtagctcctgaatggggagatgttgtgaaacagtctgga
tttcttcctgaaggtatgtttgaccgtattctcactgggcctgttgtacgagaagaagta
agcaggagagggagacggcctaaaagtgagattgccaaggcaacagctgcagcagcagca
gctgcaacagcagcaaatgtttcggtcaaccctttgctagccaatggattacttccagga
gtggatctatctactcttcaggccttacaacaaaacctgcagaacttgcaatcacttcaa
gtaacagcaggattaatgggaatgcctgctggactaactactggaggagaagctaagaat
atggctgccatgtttcccatgctactgtcaggaatggctggattaccaaacttgctgggt
atgggaggactcctaacaaagtcaacagaatctgtttcagaggagaaaaagggaaatgac
tcaaaagagccagttgtaaagaaagaaaggacagaaaaccaacatgcagataatggtggt
gaagactctgtgtcaagttctccctctacgtcctctgctgctgccaaccctttagctctt
aacccattacttttgtccaatatactttatccagggatgcttctcactccaggccttaat
cttcatatcccagcattgtcccaatccaatatttttgatgtacagaatgctgaaaacaat
gacacaggatcagccaagcctacagaggaaaaggagaaaaattctagggttagagatcag
gaagacaaagggggaacagagccaagctctcataatgaaaacagcacagatgagggttca
gagaaagcagatgcttcatctggatctgacagtacatcgtcttcatctgaagattcagat
tctagtgatgaagactga
DBGET
integrated database retrieval system
