Couchioplanes caeruleus: COUCH_00045
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Entry
COUCH_00045 CDS
T08133
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ccaz
Couchioplanes caeruleus
Brite
KEGG Orthology (KO) [BR:
ccaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaz03400
]
COUCH_00045
Enzymes [BR:
ccaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
COUCH_00045
DNA repair and recombination proteins [BR:
ccaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
COUCH_00045
Prokaryotic type
COUCH_00045
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UQU64808
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All DBs
Position
complement(10286..11620)
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AA seq
444 aa
AA seq
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MRTAIVLFTRDLRVHDNPALAAACATAETVVPLFVLDPPLQKLSPNRARFLHQSLADLRE
SLRSRGGDLIVREGEPVAETMRLAREVQADGIALAQDVSTYARRREGRLQDECERHRISL
RLFPGTTVVPPGGVRPGGGDGHYKVFSPYYRAWESAKWRDEVATPARITLPADLAVAPLP
PLPEGDSPAALDGGETEGLRRLKAWPRHVGSYDDLHDDMAADATSRLSAYLRFGCLSPLT
VANRARDLDGAGPAAFLRQLGWRDFYYQVTHAFPKISTEAYRTSGDTGWRYDQDALQHWK
DGLTGVPIVDAGMRQMQVEGWMHNRARLITAAFLTKHLGLDWRDGVKWFFRWLNDGDVAN
NSGNWQWVAGTGNDTRPYRRFNPIRQAERFDPDGVYVRRYVPELTSIAGKAVHQPWRLPD
TVRSGLDYPAPLESHRDEAVWLRP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgcgatcgtgctcttcacccgcgacctgcgggtgcacgacaaccccgccctg
gccgccgcctgcgccaccgcggagaccgtcgtgccgctcttcgtcctcgacccccccctg
cagaagctctcgcccaaccgggcgcgcttcctgcaccagagcctcgcggatctgcgcgag
agcctgcgttcccgcggtggcgacctgatcgtccgggagggcgagccggtggccgagacg
atgcggctggcacgggaggtgcaggcggacgggatcgccctcgcccaggacgtgagcacg
tacgcccggcgtcgcgagggccgcctgcaggacgagtgcgaacggcaccggatctcgttg
cggctgtttcccggcaccaccgtggtgccaccgggaggggtgcgccccggtggcggggac
gggcactacaaggtcttctcgccgtactaccgggcgtgggagtcggccaagtggcgcgac
gaggtggcgactcccgcacggatcacgctccccgccgacctggccgtcgccccgctgcca
cccctgcccgagggcgactcgccggcggccctcgacggcggcgagaccgaggggctgcgg
cggctcaaggcctggccgcgccacgtcggctcgtacgacgatctgcacgacgacatggcc
gccgacgcgacgtcgcggctgagtgcgtacctccgcttcgggtgtctctccccgctgacc
gtggcgaaccgggcgcgcgatctcgacggcgccggaccggcggcgttcctgcgccagctc
ggctggcgcgacttctactaccaggtcacgcatgccttcccgaagatctcgacggaggcg
tatcgcacgagcggtgacaccggctggcggtacgaccaggacgcgctgcagcactggaag
gacgggctgaccggcgtgccgatcgtcgacgcgggcatgcggcagatgcaggtggagggg
tggatgcacaaccgtgcccggctcatcaccgcggcgttcctgaccaagcatctcgggctc
gattggcgtgacggcgtgaagtggttcttccgctggctgaacgacggcgacgtggccaac
aattcgggcaattggcagtgggtggcgggcaccggcaacgacaccaggccttaccgccgg
ttcaatccgatccgccaggccgagcgcttcgaccccgacggcgtgtacgttcgtcgctac
gtaccggagttgacatcgatcgcggggaaggccgtgcaccaaccgtggcgcctgcccgat
acggttcgatcaggcctggactaccccgcaccgctggagtcgcaccgcgacgaggcggtg
tggctgaggccgtga
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